DK944994 |
Clone id |
YMU02A01NGRL0007_N11 |
Library |
YMU02 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_N11. 5' end sequence. |
Accession |
DK944994 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL117Contig1 |
Sequence |
CTTCGTAGGGCAAAGATTCATCTGTGCTTTGTGGTGAAGAAGCGGACATCAGCGAGTGCA GGAGCGCTGCAGCTATGGCGGCCCAGCAGATGAGCAAGAAGCGCAAGTTTGTGGCAGATG GCGTTTTTTTTGCCGAGTTGAACGAAGTTCTCACGCGAGAGCTTGCTGAAGATGGGTACT CTGGCGTAGAGGTCCGGGTTACACCCATGCGAACTGAAATCATTATTCGTGCAACAAGGA CCCAGAATGTGCTTGGGGATAAGGGGAGAAGAATCAGAGAGTTAACATCTTTGGTTCAGA AGAGGTTTAACTTTCCTGAAGGCACCGTTGAATTGTATGCTGAGAAAGTTAACAATCGGG GTCTTTGTGCTATTGCACAAGCAGAGTCACTCCGTTACAAGCTTCTTGGAGGGCTTGCTG TCAGAAGGGCTTGCTATGGTGTCCTAAGGTTTGTCATGGAGAGTGGCGCGAAGGGTTGTG AGGTCATTGTGAGTGGTAAGCTGAGAGCCCGGCGAGCGAAGTCGATGAAGTTCAAAGATG GGTATATGATTTCCTCTGGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M339 |
Definition |
sp|Q9M339|RS32_ARATH 40S ribosomal protein S3-2 OS=Arabidopsis thaliana |
Align length |
152 |
Score (bit) |
282.0 |
E-value |
7.0e-76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NTN5 |
Definition |
tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
152 |
Score (bit) |
292.0 |
E-value |
7.0e-78 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944994|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_N11, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea... 292 7e-78 tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea... 292 7e-78 tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea m... 289 8e-77 tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella paten... 288 1e-76 tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella paten... 288 1e-76 tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome ... 288 1e-76 tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains ... 286 4e-76 tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subs... 286 4e-76 tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza... 286 4e-76 tr|Q2VCJ9|Q2VCJ9_SOLTU Putative uncharacterized protein OS=Solan... 286 7e-76 tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genom... 286 7e-76 tr|A9PHW0|A9PHW0_POPTR Putative uncharacterized protein OS=Popul... 284 2e-75 tr|A9PBQ6|A9PBQ6_POPTR Putative uncharacterized protein OS=Popul... 284 2e-75 tr|A9PAW1|A9PAW1_POPTR Putative uncharacterized protein OS=Popul... 284 2e-75 tr|B3TLR8|B3TLR8_ELAGV Ribosomal protein OS=Elaeis guineensis va... 284 3e-75 tr|B7FH64|B7FH64_MEDTR Putative uncharacterized protein OS=Medic... 283 3e-75 tr|B7FGM5|B7FGM5_MEDTR Putative uncharacterized protein OS=Medic... 282 1e-74 tr|Q75G91|Q75G91_ORYSJ Os03g0577000 protein OS=Oryza sativa subs... 281 2e-74 tr|A2XIT7|A2XIT7_ORYSI Putative uncharacterized protein OS=Oryza... 281 2e-74 tr|B6TB97|B6TB97_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 280 5e-74 tr|B6TM40|B6TM40_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 279 6e-74 tr|Q1WLZ2|Q1WLZ2_CHLIN 40S ribosomal protein S3 OS=Chlamydomonas... 279 8e-74 tr|Q8L804|Q8L804_WHEAT Putative 40S ribosomal protein S3 OS=Trit... 277 3e-73 tr|A8I4P5|A8I4P5_CHLRE Ribosomal protein S3 OS=Chlamydomonas rei... 277 3e-73 tr|Q801G7|Q801G7_PETMA Ribosomal protein S3 (Fragment) OS=Petrom... 265 1e-69 tr|Q1XGD5|Q1XGD5_LAMJA Ribosomal protein S3 (Fragment) OS=Lampet... 265 1e-69 tr|A9UDN1|A9UDN1_9BILA Putative 40S ribosomal protein RPS3 (Frag... 264 2e-69 tr|Q9D0A2|Q9D0A2_MOUSE Putative uncharacterized protein OS=Mus m... 263 5e-69 tr|Q2PYZ0|Q2PYZ0_SOLTU 40S ribosomal protein-like protein OS=Sol... 263 5e-69 tr|A4RVP7|A4RVP7_OSTLU Ribosomal protein S3, component of cytoso... 263 6e-69
>tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 292 bits (748), Expect = 7e-78 Identities = 148/152 (97%), Positives = 152/152 (100%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
>tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 292 bits (748), Expect = 7e-78 Identities = 148/152 (97%), Positives = 152/152 (100%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
>tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 289 bits (739), Expect = 8e-77 Identities = 147/152 (96%), Positives = 151/152 (99%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRFNFPEG VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 163
>tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162268 PE=3 SV=1 Length = 230
Score = 288 bits (737), Expect = 1e-76 Identities = 146/152 (96%), Positives = 150/152 (98%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSG 161
>tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166897 PE=3 SV=1 Length = 231
Score = 288 bits (737), Expect = 1e-76 Identities = 146/152 (96%), Positives = 150/152 (98%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSG 161
>tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034104001 PE=3 SV=1 Length = 234
Score = 288 bits (737), Expect = 1e-76 Identities = 147/152 (96%), Positives = 150/152 (98%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRF FPE TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 70 TSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
>tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains C-terminal domain OS=Oryza sativa GN=OSJNBb0024A20.19 PE=3 SV=1 Length = 233
Score = 286 bits (733), Expect = 4e-76 Identities = 146/152 (96%), Positives = 150/152 (98%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 163
>tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0018L13.2 PE=2 SV=1 Length = 233
Score = 286 bits (733), Expect = 4e-76 Identities = 146/152 (96%), Positives = 150/152 (98%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 163
>tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26820 PE=3 SV=1 Length = 233
Score = 286 bits (733), Expect = 4e-76 Identities = 146/152 (96%), Positives = 150/152 (98%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 163
>tr|Q2VCJ9|Q2VCJ9_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 238
Score = 286 bits (731), Expect = 7e-76 Identities = 146/152 (96%), Positives = 150/152 (98%) Frame = +3
Query: 105 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 284 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 11 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 70
Query: 285 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 464 TS+VQKRFNF E +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 71 TSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 130
Query: 465 GAKGCEVIVSGKLRARRAKSMKFKDGYMISSG 560 GAKGCEVIVSGKLRA+RAKSMKFKDGYMISSG Sbjct: 131 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 162
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