BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945004|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_N23, 5'
         (155 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4G364|RK3_EMIHU 50S ribosomal protein L3, chloroplastic OS=E...    29   6.5  

>sp|Q4G364|RK3_EMIHU 50S ribosomal protein L3, chloroplastic
           OS=Emiliania huxleyi GN=rpl3 PE=3 SV=1
          Length = 207

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = -3

Query: 102 GQKVRCTAT*IGKGMYAKQKR 40
           GQKVR T T IGKG    QKR
Sbjct: 105 GQKVRVTGTSIGKGFAGNQKR 125

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945004|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_N23, 5'
         (155 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FZ74|B7FZ74_PHATR Predicted protein OS=Phaeodactylum tricor...    34   4.2  
tr|Q311G8|Q311G8_DESDG Response regulator receiver modulated dig...    33   7.2  

>tr|B7FZ74|B7FZ74_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_45933 PE=4 SV=1
          Length = 136

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +2

Query: 17  GNLCSASVLFCFAYIPFPIQVAVHLTFCPLLF 112
           GNL  ASVL   +YIPF I   + L FC  +F
Sbjct: 10  GNLMIASVLAILSYIPFEIVAKISLVFCVWMF 41


>tr|Q311G8|Q311G8_DESDG Response regulator receiver modulated
           diguanylate cyclase with PAS/PAC sensor OS=Desulfovibrio
           desulfuricans (strain G20) GN=Dde_1631 PE=4 SV=1
          Length = 561

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +1

Query: 70  DSSRCAPDLLPSLVLVDYMLC 132
           ++ RCAPDL P + LVD MLC
Sbjct: 43  EAVRCAPDLRPDIALVDIMLC 63