DK945006 |
Clone id |
YMU02A01NGRL0007_O06 |
Library |
YMU02 |
Length |
376 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_O06. 5' end sequence. |
Accession |
DK945006 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL263Contig1 |
Sequence |
AGACACTGGATGGAGCACTTGGAGATGTCTTTGGTGGAGGCCCTTTTTTTGGAGGGCAGA GCATAGGGTTTGTTGACATATCCTTGGCCCCTTTCCTCTGCTGGTTTGAAGTTTATGAGG CTCTGGGGGAGTTCAAGGTGTGGGAAGCTGCCAAGTGCCCACTCCTCTCCAAGTGGGAAG AGGCTGTGTGGGAGGTGCCATGTGTAAAATAGGCCCTTTCCTTTGCACCCCCTCGCGAGC TGGTGGAGTTCGTACAGGCCATGAGAGGGAAGATGCATGCAGGTTCCTAAGGATTTATGT CTCAGGTGTTACTGTTTTTGCTTACGCCCTGATGATCACATAGAACTTCTTATTCGGGGT GAGGGGTTTAGGACTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P25317 |
Definition |
sp|P25317|GSTXA_TOBAC Probable glutathione S-transferase parA OS=Nicotiana tabacum |
Align length |
68 |
Score (bit) |
39.7 |
E-value |
0.005 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BAQ8 |
Definition |
tr|A5BAQ8|A5BAQ8_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
68 |
Score (bit) |
48.1 |
E-value |
0.0002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945006|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_O06, 5' (376 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BAQ8|A5BAQ8_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04 tr|Q60DP1|Q60DP1_ORYSJ Os03g0643700 protein OS=Oryza sativa subs... 48 3e-04 tr|A2YT40|A2YT40_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|B8A3K0|B8A3K0_MAIZE Putative uncharacterized protein OS=Zea m... 47 4e-04 tr|A7R1H7|A7R1H7_VITVI Chromosome undetermined scaffold_356, who... 47 4e-04 tr|A7QU13|A7QU13_VITVI Chromosome undetermined scaffold_175, who... 47 4e-04 tr|Q9ZP61|Q9ZP61_MAIZE GST6 protein OS=Zea mays GN=gst6 PE=2 SV=1 47 5e-04 tr|A2XK19|A2XK19_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|Q8LL15|Q8LL15_WHEAT Glutathione-S-transferase 28e45 OS=Tritic... 45 0.001 tr|O04941|O04941_AEGTA Glutathione S-transferase TSI-1 (Glutathi... 45 0.001 tr|A7QU21|A7QU21_VITVI Chromosome undetermined scaffold_175, who... 45 0.002 tr|A7QU14|A7QU14_VITVI Chromosome undetermined scaffold_175, who... 45 0.002 tr|B6T8R4|B6T8R4_MAIZE Glutathione S-transferase OS=Zea mays PE=... 45 0.002 tr|B3TM01|B3TM01_ELAGV GST6 protein OS=Elaeis guineensis var. te... 45 0.002 tr|A9PET9|A9PET9_POPTR Putative uncharacterized protein OS=Popul... 45 0.002 tr|Q8GVD1|Q8GVD1_SOLLC Glutathione S-transferase-like protein OS... 44 0.003 tr|B1Q1N5|B1Q1N5_PROJU Auxin-induced glutathione S transferase O... 44 0.003 tr|A7R231|A7R231_VITVI Chromosome undetermined scaffold_395, who... 44 0.004 tr|A7R1H5|A7R1H5_VITVI Chromosome undetermined scaffold_356, who... 44 0.004 tr|A7QU17|A7QU17_VITVI Chromosome undetermined scaffold_175, who... 44 0.004 tr|A5AG54|A5AG54_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|A1YW90|A1YW90_VITVI Glutathione S-transferase OS=Vitis vinife... 44 0.004 tr|Q0PY04|Q0PY04_CASCR Glutathione S-transferase isoform 1 OS=Ca... 44 0.005 tr|O24595|O24595_MAIZE Glutathione transferase OS=Zea mays GN=GS... 44 0.005 tr|A5C700|A5C700_VITVI Putative uncharacterized protein (Chromos... 44 0.005 tr|Q9SHH7|Q9SHH7_ARATH Putative glutathione transferase OS=Arabi... 43 0.007 tr|B1Q1N8|B1Q1N8_PROJU Auxin-induced glutathione S transferase O... 43 0.007 tr|A7QIE8|A7QIE8_VITVI Chromosome undetermined scaffold_102, who... 43 0.007 tr|Q9AYN3|Q9AYN3_9ASTR Glutathione S-transferase OS=Matricaria c... 43 0.009 tr|A5AF45|A5AF45_VITVI Putative uncharacterized protein OS=Vitis... 43 0.009
>tr|A5BAQ8|A5BAQ8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027913 PE=4 SV=1 Length = 219
Score = 48.1 bits (113), Expect = 2e-04 Identities = 25/68 (36%), Positives = 36/68 (52%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKWEEAVWEVPCVK*ALSFAPPRELVEF 251 VD++L F CWF+ YE+ G F + A+CP L W + E V + S P ++ F Sbjct: 153 VDVALVTFSCWFQAYESFGNFSI--EAECPKLIAWTKRCMEKESV--SSSLEDPHKVHGF 208
Query: 252 VQAMRGKM 275 V MR K+ Sbjct: 209 VMGMRKKL 216
>tr|Q60DP1|Q60DP1_ORYSJ Os03g0643700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0038E17.17 PE=2 SV=1 Length = 232
Score = 47.8 bits (112), Expect = 3e-04 Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKW-EEAVWEVPCVK*ALSFAPPRELVE 248 VD++LAPF WF YE G F V AA+CP L+ W V E CV A S P + + Sbjct: 164 VDVALAPFTAWFATYERFGGFSV--AAECPELAAWAARCVRENACV--AASLPDPEFVYQ 219
Query: 249 FVQAMR 266 F MR Sbjct: 220 FACGMR 225
>tr|A2YT40|A2YT40_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28488 PE=4 SV=1 Length = 267
Score = 47.8 bits (112), Expect = 3e-04 Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKW-EEAVWEVPCVK*ALSFAPPRELVE 248 VD++LAPF WF YE G F V AA+CP L+ W V E CV A S P + + Sbjct: 199 VDVALAPFTAWFATYERFGGFSV--AAECPELAAWAARCVRENACV--AASLPDPEFVYQ 254
Query: 249 FVQAMR 266 F MR Sbjct: 255 FACGMR 260
>tr|B8A3K0|B8A3K0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 222
Score = 47.4 bits (111), Expect = 4e-04 Identities = 28/70 (40%), Positives = 37/70 (52%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKWEEAVWEVPCVK*ALSFAPPRELVEF 251 VD++L PF WF YE LG F + E CP + W E V ALS P +++EF Sbjct: 156 VDVALVPFTSWFLAYEKLGGFSIQE--HCPRIVAWAARCRERESVAKALS--DPAKVLEF 211
Query: 252 VQAMRGKMHA 281 VQ ++ K A Sbjct: 212 VQFLQSKFGA 221
>tr|A7R1H7|A7R1H7_VITVI Chromosome undetermined scaffold_356, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012190001 PE=4 SV=1 Length = 219
Score = 47.4 bits (111), Expect = 4e-04 Identities = 25/68 (36%), Positives = 35/68 (51%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKWEEAVWEVPCVK*ALSFAPPRELVEF 251 VD++L F CWF YE+ G F + A+CP L W + E V + S P ++ F Sbjct: 153 VDVALVTFSCWFHAYESFGNFSI--EAECPKLIAWTKRCMEKESV--SSSLEDPHKVHGF 208
Query: 252 VQAMRGKM 275 V MR K+ Sbjct: 209 VMGMRKKL 216
>tr|A7QU13|A7QU13_VITVI Chromosome undetermined scaffold_175, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006638001 PE=4 SV=1 Length = 219
Score = 47.4 bits (111), Expect = 4e-04 Identities = 25/68 (36%), Positives = 35/68 (51%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKWEEAVWEVPCVK*ALSFAPPRELVEF 251 VD++L F CWF YE+ G F + A+CP L W + E V + S P ++ F Sbjct: 153 VDVALVTFSCWFHAYESFGNFSI--EAECPKLIAWTKRCMEKESV--SSSLEDPHKVHGF 208
Query: 252 VQAMRGKM 275 V MR K+ Sbjct: 209 VMGMRKKL 216
>tr|Q9ZP61|Q9ZP61_MAIZE GST6 protein OS=Zea mays GN=gst6 PE=2 SV=1 Length = 222
Score = 47.0 bits (110), Expect = 5e-04 Identities = 28/70 (40%), Positives = 37/70 (52%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKWEEAVWEVPCVK*ALSFAPPRELVEF 251 VD++L PF WF YE LG F V E CP + W E V A+S P +++EF Sbjct: 156 VDVALVPFTSWFLAYEKLGGFSVQE--HCPRIVAWAARCRERESVAKAMS--DPAKVLEF 211
Query: 252 VQAMRGKMHA 281 VQ ++ K A Sbjct: 212 VQFLQSKFGA 221
>tr|A2XK19|A2XK19_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12788 PE=4 SV=1 Length = 228
Score = 47.0 bits (110), Expect = 5e-04 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +3
Query: 72 VDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKW-EEAVWEVPCVK*ALSFAPPRELVE 248 VD++LAPF WF YE G F V AA+CP L+ W E CV A S P + + Sbjct: 160 VDVALAPFTAWFATYERFGGFSV--AAECPALAAWAARCARENACV--AASLPDPEFVYQ 215
Query: 249 FVQAMR 266 F MR Sbjct: 216 FACGMR 221
>tr|Q8LL15|Q8LL15_WHEAT Glutathione-S-transferase 28e45 OS=Triticum aestivum PE=2 SV=1 Length = 228
Score = 45.4 bits (106), Expect = 0.001 Identities = 30/85 (35%), Positives = 41/85 (48%) Frame = +3
Query: 6 LDGALXXXXXXXXXXXXXXXXXVDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKWEEA 185 L+GAL VD++L L W +V EAL K+++AAK PLL+ W E Sbjct: 139 LEGALRECFKGGGFFGGDGVGLVDVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVER 198
Query: 186 VWEVPCVK*ALSFAPPRELVEFVQA 260 E+ K AL L+EF +A Sbjct: 199 FIELDAAKAAL--PDVGRLLEFAKA 221
>tr|O04941|O04941_AEGTA Glutathione S-transferase TSI-1 (Glutathione S-transferase 1) OS=Aegilops tauschii PE=1 SV=1 Length = 230
Score = 45.4 bits (106), Expect = 0.001 Identities = 30/85 (35%), Positives = 41/85 (48%) Frame = +3
Query: 6 LDGALXXXXXXXXXXXXXXXXXVDISLAPFLCWFEVYEALGEFKVWEAAKCPLLSKWEEA 185 L+GAL VD++L L W +V EAL K+++AAK PLL+ W E Sbjct: 139 LEGALRECSKGGGFFGGDGVGLVDVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVER 198
Query: 186 VWEVPCVK*ALSFAPPRELVEFVQA 260 E+ K AL L+EF +A Sbjct: 199 FIELDAAKAAL--PDVGRLLEFAKA 221
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