DK945009
Clone id YMU02A01NGRL0007_O10
Library
Length 227
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_O10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGAAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATC
TCCCAGAGACAAGAAGGGATGATATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGGG
CAAAAATGATGGGCACAAGAAATGGCACAAAAAAAGCTGAACCTCTGTCGGCCGACCCGC
CCCTCGCGAAGGTCCCCAGACCACTCGTTAGGCGCGCGGGCCCATTC
■■Homology search results ■■ -
sp_hit_id A7E8B6
Definition sp|A7E8B6|SLA1_SCLS1 Actin cytoskeleton-regulatory complex protein sla1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)
Align length 70
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945009|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_O10, 5'
(227 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7E8B6|SLA1_SCLS1 Actin cytoskeleton-regulatory complex prote... 29 6.5

>sp|A7E8B6|SLA1_SCLS1 Actin cytoskeleton-regulatory complex protein
sla1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 /
1980 / Ss-1) GN=sla1 PE=3 SV=2
Length = 1150

Score = 29.3 bits (64), Expect = 6.5
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3

Query: 21 GAYLLNI*RGRRDLPETRRDDILERQAGRRKNWAKMMGTRNGTKKAEPLSADPPLAKVPR 200
G L N R R P + +D+++ A ++NGT+K+ P PLA P
Sbjct: 737 GGALKNNTRKGRPAPAVQTNDVVDANAF----------SQNGTEKSSPQGVATPLANAPT 786

Query: 201 PL---VRRAG 221
P V+R G
Sbjct: 787 PAEKDVKREG 796


tr_hit_id B2VXE0
Definition tr|B2VXE0|B2VXE0_PYRTR tRNA (Guanine-N(1)-)-methyltransferase OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
Align length 44
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945009|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_O10, 5'
(227 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2VXE0|B2VXE0_PYRTR tRNA (Guanine-N(1)-)-methyltransferase OS... 34 3.2

>tr|B2VXE0|B2VXE0_PYRTR tRNA (Guanine-N(1)-)-methyltransferase
OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=PTRG_03186 PE=4 SV=1
Length = 393

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3

Query: 48 GRRDLPETRRDDILERQAGRRKNWAKMMGTRNGTKKAEPLSADP 179
GR D R++ I E++ RR+ WA+M NG K P S P
Sbjct: 81 GREDRKLKRKEKIKEKKERRRETWAQMPVDENGNKPRPPPSRAP 124