DK945022 |
Clone id |
YMU02A01NGRL0007_P08 |
Library |
YMU02 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_P08. 5' end sequence. |
Accession |
DK945022 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL168Contig1 |
Sequence |
GAGGCAGTTCTTTGACTTTCCTGCTGAGTTTTGAAGTCCGTCGGGTGTCTGCAACTCTGC CTTACGTGGAGGAGATTATGTCGGGAGTACTTCCGAGGAATAAAACAGTTTAAGAAGTTC TCCTCTCTGGGATGGATCATGTTTCCCTCATTGCATAACTTCTGATGAGCCTGATCTAGC CCCTTCATTCGCGTGCTGCGCCTCACGTTTTCGCGGGGCTTGAAGAGAAAGCCCATGGCT TTGATTAAGAAGCTTCGCAAGGCGAAAAGGGAAGCACCTGCGGGGGAGAAGCCGGAGCCT GTGAGAACTCACTTAAGGAACATGATCATTGTGCCTGAGATGATCGGTAGCATTATTGGC GTGTATAACGGAAAGACATTCAACCAAGTTGAAATCAAGCCTGAAATGATTGGCCACTAC TTGGGAGAGTTTTCCATCAGCTACCAGCCTGTGAAGCATGGAAGGCCCGGCATTGGTGCC ACCCACTCTTCTCGGTTTATTCCACTGAAGTAGTTTCTGATGGTGGCTATGAATTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FY64 |
Definition |
sp|Q9FY64|RS154_ARATH 40S ribosomal protein S15-4 OS=Arabidopsis thaliana |
Align length |
105 |
Score (bit) |
201.0 |
E-value |
1.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SLM1 |
Definition |
tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
104 |
Score (bit) |
201.0 |
E-value |
1.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945022|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_P08, 5' (523 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomit... 201 1e-50 tr|A9S4A4|A9S4A4_PHYPA Predicted protein OS=Physcomitrella paten... 201 1e-50 tr|A8MQ96|A8MQ96_ARATH Uncharacterized protein At5g09510.2 OS=Ar... 201 1e-50 tr|A9TG45|A9TG45_PHYPA Predicted protein OS=Physcomitrella paten... 200 4e-50 tr|A7NX09|A7NX09_VITVI Chromosome chr5 scaffold_2, whole genome ... 200 4e-50 tr|A7PUN2|A7PUN2_VITVI Chromosome chr7 scaffold_31, whole genome... 199 5e-50 tr|Q851P5|Q851P5_ORYSJ Os03g0798600 protein OS=Oryza sativa subs... 199 7e-50 tr|Q0D852|Q0D852_ORYSJ Os07g0184300 protein OS=Oryza sativa subs... 199 7e-50 tr|A9NK76|A9NK76_PICSI Putative uncharacterized protein OS=Picea... 199 7e-50 tr|A6MZB5|A6MZB5_ORYSI 40S ribosomal protein S15 OS=Oryza sativa... 199 7e-50 tr|A3BH94|A3BH94_ORYSJ Putative uncharacterized protein OS=Oryza... 199 7e-50 tr|A2YIV1|A2YIV1_ORYSI Putative uncharacterized protein OS=Oryza... 199 7e-50 tr|B3TLS1|B3TLS1_ELAGV 40S ribosomal protein S15 OS=Elaeis guine... 199 9e-50 tr|B6SII7|B6SII7_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 198 2e-49 tr|Q8W538|Q8W538_9FABA Ribosomal S15 protein (Fragment) OS=Retam... 197 2e-49 tr|A9PCZ0|A9PCZ0_POPTR Putative uncharacterized protein OS=Popul... 197 3e-49 tr|A9PAQ1|A9PAQ1_POPTR Putative uncharacterized protein OS=Popul... 197 3e-49 tr|A9P8I7|A9P8I7_POPTR Putative uncharacterized protein OS=Popul... 197 3e-49 tr|B6UGP9|B6UGP9_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 196 5e-49 tr|B6UDY1|B6UDY1_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 196 5e-49 tr|B6T6W2|B6T6W2_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 196 5e-49 tr|B6T379|B6T379_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 196 5e-49 tr|A9NNI7|A9NNI7_PICSI Putative uncharacterized protein OS=Picea... 195 1e-48 tr|B6SII4|B6SII4_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 194 2e-48 tr|Q2V4R0|Q2V4R0_ARATH Uncharacterized protein At1g04270.2 OS=Ar... 193 4e-48 tr|A9T4N2|A9T4N2_PHYPA Predicted protein OS=Physcomitrella paten... 193 4e-48 tr|Q2XTB6|Q2XTB6_SOLTU 40S ribosomal protein S15-like OS=Solanum... 192 7e-48 tr|Q2V999|Q2V999_SOLTU 40S ribosomal protein S15-like OS=Solanum... 192 7e-48 tr|Q4GXQ7|Q4GXQ7_9COLE Ribosomal protein S15e OS=Micromalthus de... 192 7e-48 tr|A6YPN5|A6YPN5_TRIIF Ribosomal protein S15e OS=Triatoma infest... 192 1e-47
>tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131980 PE=3 SV=1 Length = 146
Score = 201 bits (512), Expect = 1e-50 Identities = 98/104 (94%), Positives = 100/104 (96%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKT Sbjct: 43 RRRFQRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKT 102
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 103 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 146
>tr|A9S4A4|A9S4A4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181118 PE=3 SV=1 Length = 150
Score = 201 bits (512), Expect = 1e-50 Identities = 98/104 (94%), Positives = 100/104 (96%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKT Sbjct: 47 RRRFQRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKT 106
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 107 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 150
>tr|A8MQ96|A8MQ96_ARATH Uncharacterized protein At5g09510.2 OS=Arabidopsis thaliana GN=At5g09510 PE=3 SV=1 Length = 118
Score = 201 bits (512), Expect = 1e-50 Identities = 98/105 (93%), Positives = 101/105 (96%) Frame = +1
Query: 196 LRLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGK 375 +R FSRGL RKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGK Sbjct: 14 IRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGK 73
Query: 376 TFNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 TFNQVEIKPEMIGHYL EFSISY+PVKHGRPG+GATHSSRFIPLK Sbjct: 74 TFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 118
>tr|A9TG45|A9TG45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108089 PE=3 SV=1 Length = 150
Score = 200 bits (508), Expect = 4e-50 Identities = 97/104 (93%), Positives = 99/104 (95%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKT Sbjct: 47 RRRFQRGLKRKPMALIKKLRKAKREAPTGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKT 106
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 107 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 150
>tr|A7NX09|A7NX09_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020133001 PE=3 SV=1 Length = 185
Score = 200 bits (508), Expect = 4e-50 Identities = 98/104 (94%), Positives = 99/104 (95%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT Sbjct: 82 RRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 141
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 142 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 185
>tr|A7PUN2|A7PUN2_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023867001 PE=3 SV=1 Length = 118
Score = 199 bits (507), Expect = 5e-50 Identities = 97/104 (93%), Positives = 99/104 (95%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKT Sbjct: 15 RRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKT 74
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 75 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 118
>tr|Q851P5|Q851P5_ORYSJ Os03g0798600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0052F07.28 PE=2 SV=1 Length = 154
Score = 199 bits (506), Expect = 7e-50 Identities = 96/104 (92%), Positives = 100/104 (96%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAK++APAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKT Sbjct: 51 RRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKT 110
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 111 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
>tr|Q0D852|Q0D852_ORYSJ Os07g0184300 protein OS=Oryza sativa subsp. japonica GN=Os07g0184300 PE=3 SV=1 Length = 118
Score = 199 bits (506), Expect = 7e-50 Identities = 96/104 (92%), Positives = 100/104 (96%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAK++APAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKT Sbjct: 15 RRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKT 74
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 75 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 118
>tr|A9NK76|A9NK76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 151
Score = 199 bits (506), Expect = 7e-50 Identities = 97/104 (93%), Positives = 100/104 (96%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKR+PMALIKKLRKAKREAP+GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT Sbjct: 48 RRRFQRGLKRQPMALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 107
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 108 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
>tr|A6MZB5|A6MZB5_ORYSI 40S ribosomal protein S15 OS=Oryza sativa subsp. indica PE=2 SV=1 Length = 154
Score = 199 bits (506), Expect = 7e-50 Identities = 96/104 (92%), Positives = 100/104 (96%) Frame = +1
Query: 199 RLTFSRGLKRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 378 R F RGLKRKPMALIKKLRKAK++APAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKT Sbjct: 51 RRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKT 110
Query: 379 FNQVEIKPEMIGHYLGEFSISYQPVKHGRPGIGATHSSRFIPLK 510 FNQVEIKPEMIGHYL EFSISY+PVKHGRPGIGATHSSRFIPLK Sbjct: 111 FNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
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