BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945038|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_A05, 5'
         (740 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01745|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae GN=GAO...    31   6.2  

>sp|Q01745|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae GN=GAOA
           PE=1 SV=1
          Length = 680

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +3

Query: 3   WTTRPDLLTPRGDAAVVALEGGRIILVGG--EGHYREEDGYKYPKHVNEVYYASDQTW 170
           W   PD+   RG  +   +  GR+  +GG   G   E++G        EVY  S +TW
Sbjct: 301 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNG--------EVYSPSSKTW 350

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945038|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_A05, 5'
         (740 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9REN5|A9REN5_PHYPA Predicted protein OS=Physcomitrella paten...   126   1e-27
tr|A8IWE8|A8IWE8_CHLRE Predicted protein OS=Chlamydomonas reinha...    49   3e-04
tr|B4VXY5|B4VXY5_9CYAN PAS fold family OS=Microcoleus chthonopla...    37   1.8  
tr|A1K1G3|A1K1G3_AZOSB Poly (3-hydroxybutyrate) depolymerase OS=...    36   3.0  
tr|Q098V8|Q098V8_STIAU PKD domain protein OS=Stigmatella auranti...    35   5.2  
tr|A5UQJ6|A5UQJ6_ROSS1 Response regulator receiver protein OS=Ro...    35   6.8  
tr|A9WDX3|A9WDX3_CHLAA Regulatory protein LuxR OS=Chloroflexus a...    34   8.8  
tr|B2QGP8|B2QGP8_9CHLR Transcriptional regulator, LuxR family OS...    34   8.8  

>tr|A9REN5|A9REN5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65128 PE=4 SV=1
          Length = 457

 Score =  126 bits (317), Expect = 1e-27
 Identities = 58/110 (52%), Positives = 66/110 (60%)
 Frame = +3

Query: 3   WTTRPDLLTPRGDAAVVALEGGRIILVGGEGHYREEDGYKYPKHVNEVYYASDQTWVQKX 182
           WT RP +LTPRGDA    L G RI+++GGEGHYR  + YKYPKHVNEVYYA D  WVQK 
Sbjct: 296 WTIRPHMLTPRGDAGATVLPGNRIMVIGGEGHYRNNEQYKYPKHVNEVYYADDGIWVQKA 355

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXDVCIQQPICPALDQNEVFLDVDHPHV 332
                                   D+CI    CP+L+ NEVFLDVDHPHV
Sbjct: 356 FIPTARFRTTAASSGGLAYVFGGSDLCIDMKTCPSLNTNEVFLDVDHPHV 405


>tr|A8IWE8|A8IWE8_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_190424 PE=4 SV=1
          Length = 455

 Score = 49.3 bits (116), Expect = 3e-04
 Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
 Frame = +3

Query: 3   WTTRPDLLTPRGDAAVVALEGGRIILVGGE---GHYREEDGYKYPKHVNEVYYASDQTWV 173
           W+ R D++ PRGD  + AL GGRI++ GGE   G   ++  Y+      E Y A+D  W+
Sbjct: 321 WSPRADMINPRGDFGIEALPGGRIVVAGGERGNGVVNQQAMYEV-----EEYVAADNIWI 375

Query: 174 QKXXXXXXXXXXXXXXXXXXXXXXXXXDVCIQQPI--CPALDQNEVF--LDVDHPHVYIY 341
            K                           C Q P   C  +    VF   DV +P +Y  
Sbjct: 376 SKAPLPEARFRDDLAYVNGRVYAFGGAPTCGQTPSDDCAKVALRTVFAYFDVQYPRLYAA 435

Query: 342 LK 347
            K
Sbjct: 436 YK 437


>tr|B4VXY5|B4VXY5_9CYAN PAS fold family OS=Microcoleus
           chthonoplastes PCC 7420 GN=MC7420_4348 PE=4 SV=1
          Length = 1317

 Score = 36.6 bits (83), Expect = 1.8
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -3

Query: 342 GIYRHVDGPHPRKPHSDLKLGK*VVVCRHPHLQKQM*DHP 223
           G+Y H++G H R P  DLK+G+ +   R PHL   + + P
Sbjct: 220 GLYTHINGAHARVPVGDLKIGR-IASQRQPHLTNDILNDP 258


>tr|A1K1G3|A1K1G3_AZOSB Poly (3-hydroxybutyrate) depolymerase
           OS=Azoarcus sp. (strain BH72) GN=phaZ PE=4 SV=1
          Length = 370

 Score = 35.8 bits (81), Expect = 3.0
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +2

Query: 77  PCRWGRSLSRRGWLQVPKACQRGLLC 154
           P  WG  L   GWL VP AC RG  C
Sbjct: 244 PFTWGNGLDNSGWLYVPAACARGERC 269


>tr|Q098V8|Q098V8_STIAU PKD domain protein OS=Stigmatella aurantiaca
           DW4/3-1 GN=STIAU_5851 PE=4 SV=1
          Length = 845

 Score = 35.0 bits (79), Expect = 5.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 3   WTTRPDLLTPRGDAAVVALEGGRIILVGGEGHYREEDGYKYPKHVNEVYYASDQTW 170
           W+T   +++PR       L  G+++ VGG  +Y  +          EVY  S  TW
Sbjct: 753 WSTTGSMISPRSSQTATLLPSGKVLAVGGASYYANQT-------TAEVYDPSTSTW 801


>tr|A5UQJ6|A5UQJ6_ROSS1 Response regulator receiver protein
           OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_0474 PE=4
           SV=1
          Length = 471

 Score = 34.7 bits (78), Expect = 6.8
 Identities = 22/53 (41%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   WTTRPDLLTPRGDAAVVALEGGRIILVGGEGHYREEDGYKYPKHVNEVYYASD 161
           WT R  L  PR  A+   +E  RI ++GGE    +E G   P  +NE+Y ASD
Sbjct: 320 WTERTPLTKPRAFASAATVE-DRIYIIGGE----DESG---PLTLNEIYTASD 364


>tr|A9WDX3|A9WDX3_CHLAA Regulatory protein LuxR OS=Chloroflexus
           aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
           GN=Caur_1917 PE=4 SV=1
          Length = 487

 Score = 34.3 bits (77), Expect = 8.8
 Identities = 22/57 (38%), Positives = 28/57 (49%)
 Frame = +3

Query: 3   WTTRPDLLTPRGDAAVVALEGGRIILVGGEGHYREEDGYKYPKHVNEVYYASDQTWV 173
           W T P L  PR DA V A+  GR+ ++GGEG    E G     H  E     ++ WV
Sbjct: 347 WETAPPLPQPRRDAGV-AVAAGRLFVIGGEG----EQGPLRDSHRLEPGNDPNRRWV 398


>tr|B2QGP8|B2QGP8_9CHLR Transcriptional regulator, LuxR family
           OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_0036 PE=4
           SV=1
          Length = 487

 Score = 34.3 bits (77), Expect = 8.8
 Identities = 22/57 (38%), Positives = 28/57 (49%)
 Frame = +3

Query: 3   WTTRPDLLTPRGDAAVVALEGGRIILVGGEGHYREEDGYKYPKHVNEVYYASDQTWV 173
           W T P L  PR DA V A+  GR+ ++GGEG    E G     H  E     ++ WV
Sbjct: 347 WETAPPLPQPRRDAGV-AVAAGRLFVIGGEG----EQGPLRDSHRLEPGNDPNRRWV 398