DK945040 |
Clone id |
YMU02A01NGRL0008_A07 |
Library |
YMU02 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_A07. 5' end sequence. |
Accession |
DK945040 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL36Contig1 |
Sequence |
CTTCTCTCATTCCTTAACATCTGCTGCGGAATACTCGTCGGCGACAGCCATGGGTCGAAG ACCTGCAAGGTGCTACCGGCAGATTAAAAACAAGCCATATCCAAAATCTCGTTACTGTAG GGGTGTACCCGACCCAAAAATTCGTATATATGATGTTGGCATGAAGAAAAAGGGTGTTGA TGAGTTTCCCTTTTGTGTGCACCTTGTGAGTTGGGAGGAAGAAAATGTCTCCAGTGAAGG CCTGGAGGCAGCTCGTATTGCTTGCAACAAATACATGACAAAATTTGCTGGAAAGGATGC TTTTCATCTACGAGTTCGCGTGCACCCTTTCCATGTTCTTCGTATCAACAAGATGCTTTC ATGTGCCGGAGCTGATAGGCTCCAGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCAGGG CACTTGTGCGCGAGTTGACATTGGGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAATAA TGGTATACATGCCCAGGAGGCCTTGCGTCGCGCTAAGTTCAAATTTCCTGGAAGGCAGAA GATTATTGTGAGCCGAANATGGGGATTCACCAAATTTTCTCGAACTGACTACTTGAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
183 |
Score (bit) |
363.0 |
E-value |
1.0e-100 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
183 |
Score (bit) |
368.0 |
E-value |
1.0e-100 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945040|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_A07, 5' (598 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 368 e-100 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 363 4e-99 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 362 7e-99 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 362 9e-99 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 362 9e-99 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 362 9e-99 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 362 9e-99 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 362 9e-99 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 362 1e-98 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 362 1e-98 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 361 2e-98 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 361 2e-98 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 360 3e-98 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 360 3e-98 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 360 4e-98 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 360 4e-98 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 358 1e-97 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 358 1e-97 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 357 3e-97 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 355 1e-96 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 354 2e-96 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 352 9e-96 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 352 9e-96 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 349 8e-95 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 346 5e-94 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 345 9e-94 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 330 3e-89 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 328 2e-88 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 322 1e-86 tr|Q0DS57|Q0DS57_ORYSJ Os03g0332500 protein OS=Oryza sativa subs... 320 5e-86
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 368 bits (944), Expect = e-100 Identities = 175/183 (95%), Positives = 178/183 (97%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQGTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQKIIVSR WGFTKFSR D Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
Query: 590 YLK 598 Y+K Sbjct: 181 YVK 183
>tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 363 bits (932), Expect = 4e-99 Identities = 173/183 (94%), Positives = 177/183 (96%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYM K+AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRMRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQGTCARV IGQVLLSVRCKD+N HAQEALRRAKFKFPGRQKIIVSR WGFTKFSRTD Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDSNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180
Query: 590 YLK 598 YLK Sbjct: 181 YLK 183
>tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 362 bits (930), Expect = 7e-99 Identities = 172/183 (93%), Positives = 176/183 (96%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SR WGFTKFSR+D Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGFTKFSRSD 180
Query: 590 YLK 598 YLK Sbjct: 181 YLK 183
>tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 362 bits (929), Expect = 9e-99 Identities = 172/183 (93%), Positives = 175/183 (95%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SR WGFTKFSR D Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGFTKFSRAD 180
Query: 590 YLK 598 YLK Sbjct: 181 YLK 183
>tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 362 bits (929), Expect = 9e-99 Identities = 172/183 (93%), Positives = 175/183 (95%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SR WGFTKFSR D Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGFTKFSRAD 180
Query: 590 YLK 598 YLK Sbjct: 181 YLK 183
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 362 bits (929), Expect = 9e-99 Identities = 170/183 (92%), Positives = 177/183 (96%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSR WGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 590 YLK 598 Y+K Sbjct: 181 YVK 183
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 362 bits (929), Expect = 9e-99 Identities = 170/183 (92%), Positives = 177/183 (96%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSR WGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 590 YLK 598 Y+K Sbjct: 181 YVK 183
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 362 bits (929), Expect = 9e-99 Identities = 170/183 (92%), Positives = 177/183 (96%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSR WGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 590 YLK 598 Y+K Sbjct: 181 YVK 183
>tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=QM PE=2 SV=1 Length = 216
Score = 362 bits (928), Expect = 1e-98 Identities = 171/183 (93%), Positives = 177/183 (96%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKY+TKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYLTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSR WGFTK++RTD Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKYNRTD 180
Query: 590 YLK 598 YL+ Sbjct: 181 YLR 183
>tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 362 bits (928), Expect = 1e-98 Identities = 172/183 (93%), Positives = 175/183 (95%) Frame = +2
Query: 50 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEEENV 229 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 230 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 409 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 410 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRXWGFTKFSRTD 589 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SR WGFTKFSR D Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIDSRKWGFTKFSRAD 180
Query: 590 YLK 598 YLK Sbjct: 181 YLK 183
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