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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945041
Clone id YMU02A01NGRL0008_A08
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_A08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGGGCTTTCATATCAGGTTATGCTCTCATGTACAGGGCAGAGAACAACTTGCCAGGTA
TAGACATGATCATTCCAGTGTGGACTCCAAAAGGCATGACCTGCATAGTTGTCTCAGTAA
AGAACTTGAAACAGCCTGGCTGGCTAGAAAATGTTTCTATTGCTAAAGTAAGGTCGGAGT
TTACAAATGTAAGGGTAGAACCAGGCCTTTTCGTCATCACTATTGTTATGTCCTTGCATG
AGCCAGTCCAGGATTGGGATGGGTCTGCATGGCTTCTTTGGACATCAAATGAAGGGGATG
TAGCGACAGATATGGACCCTTACATCAACCTTACTTGTTACGGTATTGATCGCAACTACA
GTTATCTGACTGAGAACGTGAAGCTGCTCTTGAAGGAAGTGCTTATTACCGTGCCTGATG
AACTTGCTGGTGCAACTGACATCGAGAAAGAATGGATCAAGGGATTGCTTCCAGAACAAT
ATTTATAATCAGATTCTAGTGGATGATTTCATGCTCTGTTAGGTAGTTTCGTACTACGTA
TTCTATCTGCGTAGTGAGCAGGGTTTGGTTTTTCAGGTGGGAGTCAAGAAACTTTTAGTT
■■Homology search results ■■ -
sp_hit_id P38024
Definition sp|P38024|PUR6_CHICK Multifunctional protein ADE2 OS=Gallus gallus
Align length 76
Score (bit) 33.1
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945041|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_A08, 5'
         (600 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P38024|PUR6_CHICK Multifunctional protein ADE2 OS=Gallus gall...    33   1.1  
sp|P41849|YO99_CAEEL Uncharacterized glycine receptor-like prote...    32   2.5  
sp|Q49XY1|GCST_STAS1 Aminomethyltransferase OS=Staphylococcus sa...    32   3.2  
sp|B0KPF4|SELU_PSEPG tRNA 2-selenouridine synthase OS=Pseudomona...    31   4.2  
sp|Q5RB59|PUR6_PONAB Multifunctional protein ADE2 OS=Pongo abeli...    31   4.2  
sp|P22234|PUR6_HUMAN Multifunctional protein ADE2 OS=Homo sapien...    31   4.2  
sp|P22099|TRPE_VIBPA Anthranilate synthase component 1 OS=Vibrio...    30   7.1  
sp|Q5EG47|AAPK1_MOUSE 5'-AMP-activated protein kinase catalytic ...    30   7.1  
sp|Q66AT7|ZNUC_YERPS Zinc import ATP-binding protein znuC OS=Yer...    30   9.3  
sp|Q1CJG3|ZNUC_YERPN Zinc import ATP-binding protein znuC OS=Yer...    30   9.3  
sp|Q7CIC2|ZNUC_YERPE Zinc import ATP-binding protein znuC OS=Yer...    30   9.3  
sp|Q1C812|ZNUC_YERPA Zinc import ATP-binding protein znuC OS=Yer...    30   9.3  
sp|Q3J799|SECA_NITOC Protein translocase subunit secA OS=Nitroso...    30   9.3  
sp|P51583|PUR6_RAT Multifunctional protein ADE2 OS=Rattus norveg...    30   9.3  
sp|Q9DCL9|PUR6_MOUSE Multifunctional protein ADE2 OS=Mus musculu...    30   9.3  
sp|Q52KB6|C2CD3_MOUSE C2 domain-containing protein 3 OS=Mus musc...    30   9.3  

>sp|P38024|PUR6_CHICK Multifunctional protein ADE2 OS=Gallus gallus
           GN=AIRC PE=2 SV=1
          Length = 426

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
 Frame = +3

Query: 186 NVRVEPGLFVITIVMSLHEPVQDWDGSAWLLWTSNEGDVATDMDPYINL------TCYGI 347
           ++++E G+ ++T  + L + +   D  +W LW S +     D   Y +L          +
Sbjct: 190 DLKIEFGVNILTKEIVLADVI---DNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEALQMV 246

Query: 348 DRNYSYLTENVKLLLK 395
            RN+ ++ E V+LLLK
Sbjct: 247 KRNFEWVAERVELLLK 262


>sp|P41849|YO99_CAEEL Uncharacterized glycine receptor-like protein
           T20B12.9 OS=Caenorhabditis elegans GN=T20B12.9 PE=2 SV=2
          Length = 476

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 27/109 (24%), Positives = 50/109 (45%)
 Frame = +3

Query: 99  TCIVVSVKNLKQPGWLENVSIAKVRSEFTNVRVEPGLFVITIVMSLHEPVQDWDGSAWLL 278
           T I + V + ++  W  +  I   +S   +       FVI     L+E    W  S + L
Sbjct: 84  TNITLKVSDFRKKIWTPDTCIINSKSSSIHSSPSENTFVI-----LYENGLVW--SNFRL 136

Query: 279 WTSNEGDVATDMDPYINLTCYGIDRNYSYLTENVKLLLKEVLITVPDEL 425
                  V   M P+ +L+C  +  +YS+ T+ V+L+  +V IT+ +++
Sbjct: 137 NVKTPCSVNLKMFPFDSLSCEIVLESYSFNTDEVRLMWHDVPITMMEKV 185


>sp|Q49XY1|GCST_STAS1 Aminomethyltransferase OS=Staphylococcus
           saprophyticus subsp. saprophyticus (strain ATCC 15305 /
           DSM 20229) GN=gcvT PE=3 SV=1
          Length = 363

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 5/130 (3%)
 Frame = +3

Query: 84  TPKGMTCIVVSVKNLKQPGWLENVSIAKVRSEFTNVRVEPGLFVITIVMSLHEPVQDWDG 263
           TP   T +    K ++  GW   V  + ++ E   VR E GLF ++ +  +     D   
Sbjct: 8   TPLYQTFVDSGAKIVEFGGWAMPVQFSSIKEEHNAVRTEMGLFDVSHMGEIIIKGSDASN 67

Query: 264 SAWLLWTSNEGDVATDMDPYINLTCYG----IDRNYSY-LTENVKLLLKEVLITVPDELA 428
               L +++  +V T    Y  L C      ID   +Y L ENV LL+           A
Sbjct: 68  LVQYLLSNDTDNVTTHKAQYTAL-CNEQGGIIDDLITYKLEENVYLLVVN---------A 117

Query: 429 GATDIEKEWI 458
           G T+ + EW+
Sbjct: 118 GNTEKDFEWM 127


>sp|B0KPF4|SELU_PSEPG tRNA 2-selenouridine synthase OS=Pseudomonas
           putida (strain GB-1) GN=selU PE=3 SV=1
          Length = 370

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 357 YSYLTENVKLLLKEVLITVPDELAGATDIEKEWIKGLLPEQY 482
           Y  L+E ++L L+E       + +GA D+ + WI+GLL E Y
Sbjct: 297 YQRLSEILRLALEE------QQRSGAVDLHRGWIEGLLNEYY 332


>sp|Q5RB59|PUR6_PONAB Multifunctional protein ADE2 OS=Pongo abelii
           GN=PAICS PE=2 SV=3
          Length = 425

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
 Frame = +3

Query: 186 NVRVEPGLFVITIVMSLHEPVQDWDGSAWLLWTSNEGDVATDMDPYINL---TCYG---I 347
           ++++E G+ V T  + L + +   D  +W LW S +     D   Y +L   T  G   +
Sbjct: 189 DMKIEFGVDVTTKEIVLADVI---DNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMV 245

Query: 348 DRNYSYLTENVKLLLK 395
            +N+ ++ E V+LLLK
Sbjct: 246 KKNFEWVAERVELLLK 261


>sp|P22234|PUR6_HUMAN Multifunctional protein ADE2 OS=Homo sapiens
           GN=PAICS PE=1 SV=3
          Length = 425

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
 Frame = +3

Query: 186 NVRVEPGLFVITIVMSLHEPVQDWDGSAWLLWTSNEGDVATDMDPYINL---TCYG---I 347
           ++++E G+ V T  + L + +   D  +W LW S +     D   Y +L   T  G   +
Sbjct: 189 DMKIEFGVDVTTKEIVLADVI---DNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMV 245

Query: 348 DRNYSYLTENVKLLLK 395
            +N+ ++ E V+LLLK
Sbjct: 246 KKNFEWVAERVELLLK 261


>sp|P22099|TRPE_VIBPA Anthranilate synthase component 1 OS=Vibrio
           parahaemolyticus GN=trpE PE=3 SV=2
          Length = 541

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 312 MDPYINLTCYGIDRNYSYLTENVKLLLKEVLITVPDELAGATDIEKEWIKGLLPEQYL*S 491
           +D  + + CYG   ++  LTEN K LL  V   V  E+A   D E   ++ + P   +  
Sbjct: 76  VDSAVRIVCYGHTVSFHALTENGKNLLTHVNQNVRGEVASQFDGETLTLEFIQPCDTIDE 135

Query: 492 DS 497
           DS
Sbjct: 136 DS 137


>sp|Q5EG47|AAPK1_MOUSE 5'-AMP-activated protein kinase catalytic
           subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=1
          Length = 548

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 336 CYGIDRNYSYLTENVKLLLKEVLITVPDELAGATDI-EKEWIKGLLPEQYL*SDSS 500
           C GI     YL  +V  LLK +L   P + A   DI E EW K  LP+     D S
Sbjct: 227 CDGIFYTPQYLNPSVISLLKHMLQVDPMKRAAIKDIREHEWFKQDLPKYLFPEDPS 282


>sp|Q66AT7|ZNUC_YERPS Zinc import ATP-binding protein znuC
           OS=Yersinia pseudotuberculosis GN=znuC PE=3 SV=1
          Length = 253

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 35  QGREQLARYRHDHSSVDSKRHDLH 106
           +G EQLA YRH+H    + RHDLH
Sbjct: 221 RGAEQLAVYRHNH----NHRHDLH 240


>sp|Q1CJG3|ZNUC_YERPN Zinc import ATP-binding protein znuC
           OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=znuC
           PE=3 SV=1
          Length = 253

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 35  QGREQLARYRHDHSSVDSKRHDLH 106
           +G EQLA YRH+H    + RHDLH
Sbjct: 221 RGAEQLAVYRHNH----NHRHDLH 240
tr_hit_id Q4DIE5
Definition tr|Q4DIE5|Q4DIE5_TRYCR Trans-sialidase, putative OS=Trypanosoma cruzi
Align length 73
Score (bit) 34.7
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945041|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_A08, 5'
         (600 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4DIE5|Q4DIE5_TRYCR Trans-sialidase, putative OS=Trypanosoma ...    35   4.3  
tr|A7P7J5|A7P7J5_VITVI Chromosome chr9 scaffold_7, whole genome ...    34   5.6  
tr|A5AE66|A5AE66_VITVI Putative uncharacterized protein OS=Vitis...    34   5.6  
tr|B6LR39|B6LR39_BRAFL Putative uncharacterized protein OS=Branc...    34   7.4  
tr|B6L1N5|B6L1N5_BRAFL Putative uncharacterized protein OS=Branc...    34   7.4  

>tr|Q4DIE5|Q4DIE5_TRYCR Trans-sialidase, putative OS=Trypanosoma
           cruzi GN=Tc00.1047053506965.170 PE=4 SV=1
          Length = 759

 Score = 34.7 bits (78), Expect = 4.3
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -3

Query: 292 SFDVQRSHADPSQSWTGSCKDITIVMTKRPGSTLTFVNSDLTLAIETFSSQPGCFKFFTE 113
           S D ++S ADP+  W    KD+T+     PG  L  V SD+    E    +     FFT 
Sbjct: 65  SADEKQSEADPNFEWNDIPKDVTVESLGVPG--LVKVGSDVFAVAEAQCKKDEKEDFFTG 122

Query: 112 TTMQVMPFGVHTG 74
              Q++  G   G
Sbjct: 123 IASQLLTMGKDNG 135


>tr|A7P7J5|A7P7J5_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034489001
           PE=3 SV=1
          Length = 317

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 319 GSISVATSPSFDVQRSHADP-SQSWTGSCKDITIVMTKRPGSTLTFVNSDLTLAIETFSS 143
           GS S A  P  D  + + +P S SW+ +CKD+ + + +       +      L  + FS+
Sbjct: 2   GSHSSAKIPVVDFSKENLNPGSSSWSATCKDVLLALEEFGCFIAVYDKVPSELQNKLFSA 61

Query: 142 QPGCFKFFTETTMQ 101
               F   TET MQ
Sbjct: 62  LEELFNLPTETKMQ 75


>tr|A5AE66|A5AE66_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_030994 PE=3 SV=1
          Length = 317

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 319 GSISVATSPSFDVQRSHADP-SQSWTGSCKDITIVMTKRPGSTLTFVNSDLTLAIETFSS 143
           GS S A  P  D  + + +P S SW+ +CKD+ + + +       +      L  + FS+
Sbjct: 2   GSHSSAKIPVVDFSKENLNPGSSSWSATCKDVLLALEEFGCFIAVYDKVPSELQNKLFSA 61

Query: 142 QPGCFKFFTETTMQ 101
               F   TET MQ
Sbjct: 62  LEELFNLPTETKMQ 75


>tr|B6LR39|B6LR39_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_120446 PE=4 SV=1
          Length = 824

 Score = 33.9 bits (76), Expect = 7.4
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = +3

Query: 258 DGSAWLLWTSNEGDVATDMDPYINL---TCYGID---RNYSYLTENVKLLLKEVLITVPD 419
           D  +W LW S +  +  D   Y  L   T   +D   RN+ ++ E VKLL  +    V  
Sbjct: 611 DSDSWRLWPSGDRRLMKDKQVYRELKEVTAEALDEVKRNFQWVAERVKLLQTKPSAQVVV 670

Query: 420 ELAGATDIE 446
            +  ATD+E
Sbjct: 671 LMGSATDLE 679


>tr|B6L1N5|B6L1N5_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_117612 PE=4 SV=1
          Length = 419

 Score = 33.9 bits (76), Expect = 7.4
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = +3

Query: 258 DGSAWLLWTSNEGDVATDMDPYINL---TCYGID---RNYSYLTENVKLLLKEVLITVPD 419
           D  +W LW S +  +  D   Y  L   T   +D   RN+ ++ E VKLL  +    V  
Sbjct: 206 DSDSWRLWPSGDRRLMKDKQVYRELKEVTAEALDEVKRNFQWVAERVKLLQTKPSAQVVV 265

Query: 420 ELAGATDIE 446
            +  ATD+E
Sbjct: 266 LMGSATDLE 274