DK945045 |
Clone id |
YMU02A01NGRL0008_A13 |
Library |
YMU02 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_A13. 5' end sequence. |
Accession |
DK945045 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL13Contig1 |
Sequence |
GTCCTAGAGATGATCCAAAGGCTCGCAGTAAGATTCTCTCAGAGGAGTTTGGGTGGGATA AGGACTTGGCTAAGAAAATTTGGTGCTTTGGTCCAGAGACCACTGGACCAAATCTAGTTG TGGACATGTGTAAAGGAGTGCAGTACTTGAATGAAATCAAGGATTCTGTTGTTGCTGCCT TCCAGTGGGCCACGAAGGAGGGTGCCCTTGCTGAGGAGAACATGAGGGGTATAGCTTTTG AGGTATGTGATGTTGTCCTGCATGCTGATGCCATCCACAGAGGAGGCGGTCAGGTTATCC CTACAGCACGACGTGTCATGTATGCATCTCAACTCACAGCAAAACCAAGGCTTTTGGAAC CTGTGTATCTTGTGGAAATTCAAGCCCCTGAGCAAGCACTTGGAGGTATCTATGGAGTAC TCAATCAGAAGAGAGGACATGTGTTCGAAGAGATACAGCGTCCTGGTACCCCACTTTATA ATATCAAGGCTTACTTGCCTGTTATCGAGTCCTTTGGTTTCTCAGGTACACTCCGTGCTG CCACCTCTGGACAAGCCTTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23755 |
Definition |
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris |
Align length |
181 |
Score (bit) |
347.0 |
E-value |
3.0e-95 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PWR8 |
Definition |
tr|A7PWR8|A7PWR8_VITVI Chromosome chr19 scaffold_35, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
181 |
Score (bit) |
359.0 |
E-value |
6.0e-98 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945045|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_A13, 5' (547 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PWR8|A7PWR8_VITVI Chromosome chr19 scaffold_35, whole genom... 359 6e-98 tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella paten... 358 1e-97 tr|A9SYQ7|A9SYQ7_PHYPA Predicted protein OS=Physcomitrella paten... 357 3e-97 tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella paten... 357 3e-97 tr|A9PIF0|A9PIF0_POPTR Putative uncharacterized protein OS=Popul... 355 1e-96 tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subs... 353 3e-96 tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subs... 353 3e-96 tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H06... 353 3e-96 tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza... 353 3e-96 tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 349 5e-95 tr|B4FPR8|B4FPR8_MAIZE Putative uncharacterized protein OS=Zea m... 349 5e-95 tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert seque... 344 2e-93 tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza... 344 2e-93 tr|Q9SGT4|Q9SGT4_ARATH Elongation factor EF-2 OS=Arabidopsis tha... 340 2e-92 tr|Q9ASR1|Q9ASR1_ARATH At1g56070/T6H22_13 (Putative elongation f... 340 2e-92 tr|Q8H145|Q8H145_ARATH Putative elongation factor (Fragment) OS=... 340 2e-92 tr|Q84R07|Q84R07_ARATH Putative elongation factor (Fragment) OS=... 340 2e-92 tr|Q56WY3|Q56WY3_ARATH Putative uncharacterized protein At1g5607... 340 2e-92 tr|Q56WX9|Q56WX9_ARATH Putative uncharacterized protein At1g5607... 340 2e-92 tr|Q33BU9|Q33BU9_CHLPY Elongation factor 2 (Fragment) OS=Chlorel... 325 1e-87 tr|Q9SXV8|Q9SXV8_LITER Elongation factor 2 (Fragment) OS=Lithosp... 317 3e-85 tr|Q00W31|Q00W31_OSTTA Mitochondrial elongation factor (ISS) OS=... 316 4e-85 tr|A4SB22|A4SB22_OSTLU Predicted protein OS=Ostreococcus lucimar... 315 8e-85 tr|B5A527|B5A527_MESVI Eukaryotic translation elongation factor ... 310 4e-83 tr|B5A526|B5A526_MESVI Eukaryotic translation elongation factor ... 308 2e-82 tr|A8JHX9|A8JHX9_CHLRE Elongation factor 2 OS=Chlamydomonas rein... 305 1e-81 tr|Q45NI3|Q45NI3_MEDSA Elongation factor 2 (Fragment) OS=Medicag... 298 1e-79 tr|Q2MM02|Q2MM02_9EUKA Translation elongation factor 2 (Fragment... 286 4e-76 tr|B5A517|B5A517_CYAPA Eukaryotic translation elongation factor ... 285 8e-76 tr|Q8W0C4|Q8W0C4_ORYSJ cDNA clone:J033048F11, full insert sequen... 281 2e-74
>tr|A7PWR8|A7PWR8_VITVI Chromosome chr19 scaffold_35, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025739001 PE=4 SV=1 Length = 508
Score = 359 bits (921), Expect = 6e-98 Identities = 173/181 (95%), Positives = 178/181 (98%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVA F Sbjct: 274 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGF 333
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWA+KEGALAEENMRGI FEVCDVVLHADAIHRGGGQVIPTARRV+YASQLTAKPRLLEP Sbjct: 334 QWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEP 393
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPEQALGGIY VLNQKRGHVFEE+QRPGTPLYNIKAYLPV+ESFGFSGTLRAA Sbjct: 394 VYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSGTLRAA 453
Query: 543 T 545 T Sbjct: 454 T 454
>tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109208 PE=4 SV=1 Length = 843
Score = 358 bits (918), Expect = 1e-97 Identities = 172/181 (95%), Positives = 178/181 (98%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RS+IL++EFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVAAF Sbjct: 609 PRDDPKVRSQILAQEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAAF 668
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWATKEGALAEENMRGIAFEVCDVVLH DAIHRGGGQVIPTARRVMYA+QLTAKPRLLEP Sbjct: 669 QWATKEGALAEENMRGIAFEVCDVVLHTDAIHRGGGQVIPTARRVMYAAQLTAKPRLLEP 728
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKAYLPVIESFGFSGTLRAA Sbjct: 729 VYLVEIQAPEGALGGIYGVLNQKRGHVFEEVQRPGTPLYNIKAYLPVIESFGFSGTLRAA 788
Query: 543 T 545 T Sbjct: 789 T 789
>tr|A9SYQ7|A9SYQ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217197 PE=4 SV=1 Length = 831
Score = 357 bits (915), Expect = 3e-97 Identities = 170/181 (93%), Positives = 178/181 (98%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RS+IL++EFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVAAF Sbjct: 597 PRDDPKVRSQILAQEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAAF 656
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWATKEGA+AEENMRGIAFEVCDVVLH DAIHRGGGQ+IPTARRVMYA+QLTAKPRLLEP Sbjct: 657 QWATKEGAMAEENMRGIAFEVCDVVLHTDAIHRGGGQIIPTARRVMYAAQLTAKPRLLEP 716
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKAYLPVIESFGFSGTLRAA Sbjct: 717 VYLVEIQAPEGALGGIYGVLNQKRGHVFEEVQRPGTPLYNIKAYLPVIESFGFSGTLRAA 776
Query: 543 T 545 T Sbjct: 777 T 777
>tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189887 PE=4 SV=1 Length = 843
Score = 357 bits (915), Expect = 3e-97 Identities = 170/181 (93%), Positives = 178/181 (98%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RS+IL++EFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVAAF Sbjct: 609 PRDDPKVRSQILAQEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAAF 668
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWATKEGA+AEENMRGIAFEVCDVVLH DAIHRGGGQ+IPTARRVMYA+QLTAKPRLLEP Sbjct: 669 QWATKEGAMAEENMRGIAFEVCDVVLHTDAIHRGGGQIIPTARRVMYAAQLTAKPRLLEP 728
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKAYLPVIESFGFSGTLRAA Sbjct: 729 VYLVEIQAPEGALGGIYGVLNQKRGHVFEEVQRPGTPLYNIKAYLPVIESFGFSGTLRAA 788
Query: 543 T 545 T Sbjct: 789 T 789
>tr|A9PIF0|A9PIF0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 616
Score = 355 bits (910), Expect = 1e-96 Identities = 170/181 (93%), Positives = 176/181 (97%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK R KILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVA F Sbjct: 382 PRDDPKIRGKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGF 441
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWA+KEGALAEENMRGI FEVCDVVLH+DAIHRGGGQVIPTARRV+YASQLTAKPRLLEP Sbjct: 442 QWASKEGALAEENMRGICFEVCDVVLHSDAIHRGGGQVIPTARRVIYASQLTAKPRLLEP 501
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VY+VEIQAPEQALGGIY VLNQKRGHVFEEIQRPGTPLYNIKAYLPV+ESFGFSGTLRAA Sbjct: 502 VYMVEIQAPEQALGGIYSVLNQKRGHVFEEIQRPGTPLYNIKAYLPVVESFGFSGTLRAA 561
Query: 543 T 545 T Sbjct: 562 T 562
>tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020P07.3 PE=2 SV=2 Length = 843
Score = 353 bits (907), Expect = 3e-96 Identities = 171/181 (94%), Positives = 175/181 (96%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVA F Sbjct: 609 PRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGF 668
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWA+KEGALAEENMRGI FEVCDVVLHADAIHRGGGQVIPTARRV+YASQLTAKPRLLEP Sbjct: 669 QWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEP 728
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKAYLPVIESFGFS LRAA Sbjct: 729 VYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAA 788
Query: 543 T 545 T Sbjct: 789 T 789
>tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subsp. japonica GN=P0461D06.32 PE=2 SV=1 Length = 843
Score = 353 bits (907), Expect = 3e-96 Identities = 171/181 (94%), Positives = 175/181 (96%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVA F Sbjct: 609 PRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGF 668
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWA+KEGALAEENMRGI FEVCDVVLHADAIHRGGGQVIPTARRV+YASQLTAKPRLLEP Sbjct: 669 QWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEP 728
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKAYLPVIESFGFS LRAA Sbjct: 729 VYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAA 788
Query: 543 T 545 T Sbjct: 789 T 789
>tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H0613H07.5 PE=4 SV=1 Length = 843
Score = 353 bits (907), Expect = 3e-96 Identities = 171/181 (94%), Positives = 175/181 (96%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVA F Sbjct: 609 PRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGF 668
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWA+KEGALAEENMRGI FEVCDVVLHADAIHRGGGQVIPTARRV+YASQLTAKPRLLEP Sbjct: 669 QWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEP 728
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKAYLPVIESFGFS LRAA Sbjct: 729 VYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAA 788
Query: 543 T 545 T Sbjct: 789 T 789
>tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07431 PE=4 SV=1 Length = 843
Score = 353 bits (907), Expect = 3e-96 Identities = 171/181 (94%), Positives = 175/181 (96%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVA F Sbjct: 609 PRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGF 668
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWA+KEGALAEENMRGI FEVCDVVLHADAIHRGGGQVIPTARRV+YASQLTAKPRLLEP Sbjct: 669 QWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEP 728
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKAYLPVIESFGFS LRAA Sbjct: 729 VYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAA 788
Query: 543 T 545 T Sbjct: 789 T 789
>tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 Length = 843
Score = 349 bits (896), Expect = 5e-95 Identities = 168/181 (92%), Positives = 175/181 (96%) Frame = +3
Query: 3 PRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNLVVDMCKGVQYLNEIKDSVVAAF 182 PRDDPK RS+ILS+EFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEIKDSVVA F Sbjct: 609 PRDDPKVRSQILSQEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGF 668
Query: 183 QWATKEGALAEENMRGIAFEVCDVVLHADAIHRGGGQVIPTARRVMYASQLTAKPRLLEP 362 QWA+KEGALAEENMRGI FEVCDVVLHADAIHRGGGQVIPTARRV+YASQLTAKPRLLEP Sbjct: 669 QWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEP 728
Query: 363 VYLVEIQAPEQALGGIYGVLNQKRGHVFEEIQRPGTPLYNIKAYLPVIESFGFSGTLRAA 542 VYLVEIQAPE ALGGIYGVLNQKRGHVFEE+QRPGTPLYNIKA+LPVIESFGFS LRAA Sbjct: 729 VYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAFLPVIESFGFSSQLRAA 788
Query: 543 T 545 T Sbjct: 789 T 789
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