DK945049
Clone id YMU02A01NGRL0008_A19
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_A19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGCTTTTCGTTCATGTTGTAGC
GGAAGAAGCCGAAGCTTTTGTCGCTCCACCCAGTGGCCTCACAATGAACCTGAAAGTGGA
GGGTACTCTTGCTGATTCTTTGATTCCCAAGGTTGCCGACATCCTGAAGAATGTTGAGGG
TGTTTCTAACCTTAAGGTGTACACATCTGAAGGGGTGGCAACAGTGGAGTTGGAGAAGCA
AACGACCATTCAAGCCACAGGTGAAGCACCTTCTTTGCTAGAGAAGATTCAAGGAGAGGG
GTTCAAGCTGCAAAACCTTTCTATTAGCTTTGATGACGCCACTGCTGATGCGGATGAGGA
TATTGCGTATGAATATGAGAGTACTTCATGAGGAAATTTCTGCCGTTCACAAGTCCAATT
GATTAGTTGGTTTACAAAGCTTCTTAAAAATGGGAAGGTCTCTTACATGTTTTGCCGAGG
TATCTTGTACACTTAATCAAGTAAAATCTAAAGAATGCCTGGTTAATGCGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P58342
Definition sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti
Align length 75
Score (bit) 34.7
E-value 0.24
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945049|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_A19, 5'
(490 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium ... 35 0.24
sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorh... 33 0.70
sp|O50313|BCHD_CHLP8 Magnesium-chelatase 67 kDa subunit OS=Chlor... 32 1.2
sp|Q93SW0|BCHD_CHLTE Magnesium-chelatase 67 kDa subunit OS=Chlor... 31 2.7
sp|Q4X0S7|DPH1_ASPFU Diphthamide biosynthesis protein 1 OS=Asper... 30 4.5
sp|A2VDJ0|T131L_HUMAN Transmembrane protein 131-like OS=Homo sap... 30 5.9
sp|P56721|COLL_DROME Transcription factor collier OS=Drosophila ... 30 7.8

>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium
meliloti GN=actP2 PE=3 SV=1
Length = 827

Score = 34.7 bits (78), Expect = 0.24
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1

Query: 49 PSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEA 228
P T L++EG S + +V LK V GV++ V + ATV L I T +
Sbjct: 79 PRIATEELQIEGMTCASCVSRVEKALKAVPGVADAAVNLATEKATVSL-----ISGTADL 133

Query: 229 PSLLEKIQGEGFKLQ 273
+L ++G G++L+
Sbjct: 134 SALEAAVRGAGYELR 148


>sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase
OS=Sinorhizobium medicae (strain WSM419) GN=actP PE=1
SV=1
Length = 827

Score = 33.1 bits (74), Expect = 0.70
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1

Query: 49 PSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEA 228
P +T +++EG S + +V LK V GV++ V + ATV L + + E
Sbjct: 79 PRIVTEEIQIEGMTCASCVSRVEKALKAVPGVADASVNLATEKATVRL-----VSGSAEI 133

Query: 229 PSLLEKIQGEGFKLQ 273
+L ++G G+ ++
Sbjct: 134 SALAAAVKGAGYGIR 148


>sp|O50313|BCHD_CHLP8 Magnesium-chelatase 67 kDa subunit
OS=Chlorobaculum parvum (strain NCIB 8327) GN=bchD PE=3
SV=1
Length = 619

Score = 32.3 bits (72), Expect = 1.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1

Query: 166 SEGVATVELEKQTTIQATGEAPSLLEKIQGEGFKLQN 276
S+G+A++ ++ Q + GEAP L +K+ G F L N
Sbjct: 571 SDGIASIVVDTQMNYLSRGEAPKLAQKLGGRYFYLPN 607


>sp|Q93SW0|BCHD_CHLTE Magnesium-chelatase 67 kDa subunit
OS=Chlorobium tepidum GN=bchD PE=3 SV=1
Length = 620

Score = 31.2 bits (69), Expect = 2.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1

Query: 166 SEGVATVELEKQTTIQATGEAPSLLEKIQGEGFKLQN 276
++G+A++ ++ Q + GEAP L +K+ G F L N
Sbjct: 572 ADGIASIVVDTQMNYLSRGEAPKLAQKLGGRYFYLPN 608


>sp|Q4X0S7|DPH1_ASPFU Diphthamide biosynthesis protein 1
OS=Aspergillus fumigatus GN=dph1 PE=3 SV=1
Length = 445

Score = 30.4 bits (67), Expect = 4.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1

Query: 220 LWLEWSFASPTPLLPPLQMCTP*G*KHPQHSSGCRQPWESKNQQEYP 80
L ++W +A P PLL P + + G R+ W+S N YP
Sbjct: 386 LSIDWGYAFPRPLLTPYEALI---------ALGVREHWDSANSGVYP 423


>sp|A2VDJ0|T131L_HUMAN Transmembrane protein 131-like OS=Homo sapiens
GN=KIAA0922 PE=1 SV=2
Length = 1609

Score = 30.0 bits (66), Expect = 5.9
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1

Query: 52 SGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTS--EGVATVELEKQTTIQATGE 225
SG+ +NL+ TL +L+ K + LKN SN S EG+ T K+T I+ +
Sbjct: 1036 SGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQTCMFPKETDIKTSEN 1095

Query: 226 APSLLEK 246
E+
Sbjct: 1096 TAEFKER 1102


>sp|P56721|COLL_DROME Transcription factor collier OS=Drosophila
melanogaster GN=kn PE=2 SV=2
Length = 575

Score = 29.6 bits (65), Expect = 7.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1

Query: 340 SHIHTQYPHPHQQWRH 293
+H H YPHPHQ W +
Sbjct: 549 AHPHHHYPHPHQPWHN 564


tr_hit_id Q93VK7
Definition tr|Q93VK7|Q93VK7_ARATH AT5g14910/F2G14_30 (Putative uncharacterized protein) OS=Arabidopsis thaliana
Align length 82
Score (bit) 93.6
E-value 4.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945049|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_A19, 5'
(490 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q93VK7|Q93VK7_ARATH AT5g14910/F2G14_30 (Putative uncharacteri... 94 4e-18
tr|A9T080|A9T080_PHYPA Predicted protein OS=Physcomitrella paten... 89 8e-17
tr|A7PMF1|A7PMF1_VITVI Chromosome chr14 scaffold_21, whole genom... 87 4e-16
tr|Q9LFR4|Q9LFR4_ARATH Putative uncharacterized protein F2G14_30... 86 9e-16
tr|Q5WMQ0|Q5WMQ0_ORYSJ Putative uncharacterized protein OSJNBa00... 86 1e-15
tr|Q0DJ21|Q0DJ21_ORYSJ Os05g0337400 protein OS=Oryza sativa subs... 86 1e-15
tr|A3B2T0|A3B2T0_ORYSJ Putative uncharacterized protein OS=Oryza... 86 1e-15
tr|A2Y3C4|A2Y3C4_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15
tr|B6TI14|B6TI14_MAIZE Putative uncharacterized protein OS=Zea m... 83 6e-15
tr|A9RV35|A9RV35_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-14
tr|A9NT30|A9NT30_PICSI Putative uncharacterized protein OS=Picea... 80 7e-14
tr|A9S9T8|A9S9T8_PHYPA Predicted protein OS=Physcomitrella paten... 78 3e-13
tr|B6Y078|B6Y078_ANATH Copper ion binding protein OS=Anaerocellu... 38 0.29
tr|B3EDB9|B3EDB9_CHLL2 Magnesium chelatase ATPase subunit D OS=C... 37 0.64
tr|A0AJV7|A0AJV7_LISW6 Complete genome OS=Listeria welshimeri se... 36 1.1
tr|A8UT36|A8UT36_9AQUI Mercuric reductase MerA OS=Hydrogenivirga... 36 1.1
tr|A6X3Z4|A6X3Z4_OCHA4 Heavy metal translocating P-type ATPase O... 35 1.4
tr|Q3B4S2|Q3B4S2_PELLD Protoporphyrin IX magnesium-chelatase OS=... 35 1.9
tr|B4S8S0|B4S8S0_PROA2 Magnesium chelatase ATPase subunit D OS=P... 35 1.9
tr|B3EQ56|B3EQ56_CHLPB Magnesium chelatase ATPase subunit D OS=C... 35 1.9
tr|B2UE69|B2UE69_RALPJ Heavy metal transport/detoxification prot... 35 1.9
tr|B7V4Z9|B7V4Z9_PSEAE Heavy metal translocating P-type ATPase O... 35 1.9
tr|A7CK56|A7CK56_BURPI Heavy metal transport/detoxification prot... 35 1.9
tr|Q71YG4|Q71YG4_LISMF Heavy metal-binding protein OS=Listeria m... 35 2.4
tr|Q4EH63|Q4EH63_LISMO Heavy metal-binding protein OS=Listeria m... 35 2.4
tr|B6KXV0|B6KXV0_BRAFL Putative uncharacterized protein OS=Branc... 35 2.4
tr|B6KXU2|B6KXU2_BRAFL Putative uncharacterized protein OS=Branc... 35 2.4
tr|Q8Y648|Q8Y648_LISMO Lmo1852 protein OS=Listeria monocytogenes... 34 3.2
tr|Q4EPP8|Q4EPP8_LISMO Heavy metal-binding protein OS=Listeria m... 34 3.2
tr|A6AST1|A6AST1_VIBHA Copper-transporting P-type ATPase OS=Vibr... 34 3.2

>tr|Q93VK7|Q93VK7_ARATH AT5g14910/F2G14_30 (Putative uncharacterized
protein) OS=Arabidopsis thaliana GN=At5g14910 PE=2 SV=1
Length = 178

Score = 93.6 bits (231), Expect = 4e-18
Identities = 48/82 (58%), Positives = 61/82 (74%)
Frame = +1

Query: 46 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 225
P LTM + +GTL ++ IP V L++++GVSNLKV SEGVA VEL KQTT+QATG
Sbjct: 89 PSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVELLKQTTVQATGV 148

Query: 226 APSLLEKIQGEGFKLQNLSISF 291
A +L+E IQG GFKLQ L++SF
Sbjct: 149 ASNLVETIQGAGFKLQTLNLSF 170


>tr|A9T080|A9T080_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_167413 PE=4 SV=1
Length = 194

Score = 89.4 bits (220), Expect = 8e-17
Identities = 46/82 (56%), Positives = 58/82 (70%)
Frame = +1

Query: 46 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 225
P GL+M K EG+L ++ IPKV +L+ EGVS +KVY EG ATVEL KQT IQATG
Sbjct: 92 PAEGLSMYFKAEGSLNENNIPKVTKVLEETEGVSQVKVYVLEGAATVELVKQTDIQATGV 151

Query: 226 APSLLEKIQGEGFKLQNLSISF 291
A SL++ I+ GFK+Q LS+ F
Sbjct: 152 ASSLVQLIETAGFKMQALSLGF 173


>tr|A7PMF1|A7PMF1_VITVI Chromosome chr14 scaffold_21, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020796001
PE=4 SV=1
Length = 153

Score = 87.0 bits (214), Expect = 4e-16
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +1

Query: 46 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 225
P LTM + EGT+ ++ IP V L+ EG++ LKV EG+A+V L KQTT+QATG
Sbjct: 64 PSDILTMFFQAEGTMNETAIPTVTKALEETEGITTLKVQVVEGIASVALTKQTTVQATGV 123

Query: 226 APSLLEKIQGEGFKLQNLSISF 291
A SL+E IQG GFKLQ L++SF
Sbjct: 124 ASSLVETIQGSGFKLQTLNLSF 145


>tr|Q9LFR4|Q9LFR4_ARATH Putative uncharacterized protein F2G14_30
OS=Arabidopsis thaliana GN=F2G14_30 PE=4 SV=1
Length = 175

Score = 85.9 bits (211), Expect = 9e-16
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = +1

Query: 46 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 225
P LTM + +GTL ++ IP V L++++GVSNLKV SEGVA VE QTT+QATG
Sbjct: 89 PSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVE---QTTVQATGV 145

Query: 226 APSLLEKIQGEGFKLQNLSISF 291
A +L+E IQG GFKLQ L++SF
Sbjct: 146 ASNLVETIQGAGFKLQTLNLSF 167


>tr|Q5WMQ0|Q5WMQ0_ORYSJ Putative uncharacterized protein
OSJNBa0053E01.2 OS=Oryza sativa subsp. japonica
GN=OSJNBa0053E01.2 PE=4 SV=1
Length = 536

Score = 85.5 bits (210), Expect = 1e-15
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +1

Query: 58 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEAPSL 237
L + K EGT+ + IPK+ L+ VEGVS+L+V EG+ +V L K+TT+QATG A +L
Sbjct: 390 LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 449

Query: 238 LEKIQGEGFKLQNLSISF 291
+E IQG GFKLQ LS+SF
Sbjct: 450 VEAIQGAGFKLQTLSLSF 467


>tr|Q0DJ21|Q0DJ21_ORYSJ Os05g0337400 protein OS=Oryza sativa subsp.
japonica GN=Os05g0337400 PE=4 SV=1
Length = 346

Score = 85.5 bits (210), Expect = 1e-15
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +1

Query: 58 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEAPSL 237
L + K EGT+ + IPK+ L+ VEGVS+L+V EG+ +V L K+TT+QATG A +L
Sbjct: 63 LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 122

Query: 238 LEKIQGEGFKLQNLSISF 291
+E IQG GFKLQ LS+SF
Sbjct: 123 VEAIQGAGFKLQTLSLSF 140


>tr|A3B2T0|A3B2T0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_017352 PE=4 SV=1
Length = 160

Score = 85.5 bits (210), Expect = 1e-15
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +1

Query: 58 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEAPSL 237
L + K EGT+ + IPK+ L+ VEGVS+L+V EG+ +V L K+TT+QATG A +L
Sbjct: 63 LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 122

Query: 238 LEKIQGEGFKLQNLSISF 291
+E IQG GFKLQ LS+SF
Sbjct: 123 VEAIQGAGFKLQTLSLSF 140


>tr|A2Y3C4|A2Y3C4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_19510 PE=4 SV=1
Length = 160

Score = 85.5 bits (210), Expect = 1e-15
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +1

Query: 58 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEAPSL 237
L + K EGT+ + IPK+ L+ VEGVS+L+V EG+ +V L K+TT+QATG A +L
Sbjct: 63 LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 122

Query: 238 LEKIQGEGFKLQNLSISF 291
+E IQG GFKLQ LS+SF
Sbjct: 123 VEAIQGAGFKLQTLSLSF 140


>tr|B6TI14|B6TI14_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 161

Score = 83.2 bits (204), Expect = 6e-15
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +1

Query: 58 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEAPSL 237
L + K EGT+ + IPK+ + L+ +EGV +L+V EG+ +V L K+TT+QATG A +L
Sbjct: 66 LILYFKAEGTMEERAIPKITESLEGMEGVKDLEVLIEEGIGSVVLTKETTVQATGVASNL 125

Query: 238 LEKIQGEGFKLQNLSISF 291
+E IQG GFKLQ LS+SF
Sbjct: 126 VEAIQGAGFKLQTLSLSF 143


>tr|A9RV35|A9RV35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_161159 PE=4 SV=1
Length = 197

Score = 81.3 bits (199), Expect = 2e-14
Identities = 44/97 (45%), Positives = 58/97 (59%)
Frame = +1

Query: 58 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEAPSL 237
L+M K EG+L ++ IPK+ L+ EGVS +KVY EG ATVEL KQT IQ TG A SL
Sbjct: 95 LSMFFKAEGSLNENAIPKLTKTLEGTEGVSQVKVYVVEGAATVELVKQTNIQETGVASSL 154

Query: 238 LEKIQGEGFKLQNLSISFXXXXXXXXXXXXYEYESTS 348
++ I+ GFK+Q LS+ F Y+ S +
Sbjct: 155 VQLIEQAGFKMQALSLGFDDEGADDDEYIDYDVSSNT 191