DK945051 |
Clone id |
YMU02A01NGRL0008_A22 |
Library |
YMU02 |
Length |
613 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_A22. 5' end sequence. |
Accession |
DK945051 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL405Contig1 |
Sequence |
CTCTCTCAAGAAACAGGGTCCAATGACTCGATGACTGTACGCACGACCGATCTTCGTCTT CCTCTACGGCAGAGAGCTTGAACGGAGAGCATGGGGCGACCGCCGTCAGGAGAAATGCCC GTTTTTCGATTTCTGCCGAACGAGGTGAACAAACTACTGAGCCTTTGGGAGGATTGCAAA ATTAGTGGTCCACCTAATGAAGTTCTGCAAGATCTTGTTGAGAAGTTCAGCAAAGCCAGA GAGCAAGATGGGAAAGGATGTGTGAATCGAAGGCAGGTGCTCCAGTGGTTTCAAAACAGA CGGTGGTATGTACGTAAACAGGCAGAGAAACAATTGGGAAGGCTATCTGATAAAGAGTCC TTTTCGGAGAGGACGCAAACTACCATCAGTCCTCTCTCAGATGATTTAGATGTAGCTACC CCCACCACTCCTCCCTCAGTTGAGATAGACATGAGTACAGTAGAGTTTGAAGCAAAGTCA TCTAAAGATGGTGCTTGGTATGATGTGCGAACATTCTTAGAGCACAGAATGCTCGACTCT GGACCAGAAGTACGTGTGCGCTTTGCAGGCTATGGGCCAGAAGATGATGAATGGGTGGAT GTCAGAAGCGCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7Y0V9 |
Definition |
sp|Q7Y0V9|ROC4_ORYSJ Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica |
Align length |
95 |
Score (bit) |
35.8 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNE3 |
Definition |
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
176 |
Score (bit) |
139.0 |
E-value |
2.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945051|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_A22, 5' (613 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea... 139 2e-31 tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g1838... 127 4e-28 tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Ar... 127 4e-28 tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea m... 126 9e-28 tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert seque... 124 4e-27 tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea m... 121 3e-26 tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea m... 103 8e-21 tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aest... 92 2e-17 tr|A5C728|A5C728_VITVI Putative uncharacterized protein OS=Vitis... 89 2e-16 tr|A7P748|A7P748_VITVI Chromosome chr9 scaffold_7, whole genome ... 88 3e-16 tr|A7P4B6|A7P4B6_VITVI Chromosome chr4 scaffold_6, whole genome ... 88 5e-16 tr|Q9LS52|Q9LS52_ARATH Gb|AAD39678.1 OS=Arabidopsis thaliana PE=... 87 6e-16 tr|A2YD14|A2YD14_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|Q2PEU2|Q2PEU2_TRIPR Putative uncharacterized protein OS=Trifo... 86 2e-15 tr|B4FBT7|B4FBT7_MAIZE Putative uncharacterized protein OS=Zea m... 86 2e-15 tr|A7P1U9|A7P1U9_VITVI Chromosome chr19 scaffold_4, whole genome... 85 4e-15 tr|Q6ES95|Q6ES95_ORYSJ Os09g0346900 protein OS=Oryza sativa subs... 81 6e-14 tr|B8BEP8|B8BEP8_ORYSI Putative uncharacterized protein OS=Oryza... 81 6e-14 tr|A3BBU9|A3BBU9_ORYSJ Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|Q0DC52|Q0DC52_ORYSJ Os06g0483900 protein (Fragment) OS=Oryza ... 79 3e-13 tr|A7P1V0|A7P1V0_VITVI Chromosome chr19 scaffold_4, whole genome... 75 2e-12 tr|Q9XI47|Q9XI47_ARATH F9L1.16 (Uncharacterized protein At1g1521... 75 4e-12 tr|A8MRU8|A8MRU8_ARATH Uncharacterized protein At1g15215.3 OS=Ar... 75 4e-12 tr|Q8GYR2|Q8GYR2_ARATH Putative uncharacterized protein (Putativ... 73 2e-11 tr|B4FI09|B4FI09_MAIZE Putative uncharacterized protein OS=Zea m... 70 7e-11 tr|B8B2E9|B8B2E9_ORYSI Putative uncharacterized protein OS=Oryza... 69 3e-10 tr|A3BBV7|A3BBV7_ORYSJ Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|A3BXT4|A3BXT4_ORYSJ Putative uncharacterized protein OS=Oryza... 61 5e-08 tr|A5BT31|A5BT31_VITVI Putative uncharacterized protein OS=Vitis... 57 9e-07 tr|Q0DC47|Q0DC47_ORYSJ Os06g0485100 protein OS=Oryza sativa subs... 56 1e-06
>tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 373
Score = 139 bits (349), Expect = 2e-31 Identities = 77/176 (43%), Positives = 109/176 (61%), Gaps = 4/176 (2%) Frame = +1
Query: 91 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 270 MGRPP PVFRF EV ++ + ED K + P ++++ L EKFS + E+DGK V Sbjct: 1 MGRPPLSGAPVFRFSSKEVQEMEKVLEDTKGAIPNRDMIRSLAEKFSASPERDGKILVQI 60
Query: 271 RQVLQWFQNRRWYVRKQAEKQLGRLSDK---ESFSERTQTTISPLSDDLDVATPTTPPSV 441 +QV WFQN+R+ + ++ K G + +S ++R T+ + + V Sbjct: 61 KQVWTWFQNKRYSQKTKSTKVQGNAAPSPRDDSVAKRAVTSSAAVPSGRKVP-------- 112
Query: 442 EIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVR 606 D + +EFEAKSS+DGAWYDV +F+ HRM +SG PEVRVRFAG+G E+DEWV+VR Sbjct: 113 --DGAEMEFEAKSSRDGAWYDVASFVTHRMFESGDPEVRVRFAGFGAEEDEWVNVR 166
>tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g18380 OS=Arabidopsis thaliana GN=At3g18380 PE=2 SV=1 Length = 348
Score = 127 bits (320), Expect = 4e-28 Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 20/192 (10%) Frame = +1
Query: 91 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 270 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 271 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 414 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 415 ATPTTPPSV-------EIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAG 570 TP S+ D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRFAG Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180
Query: 571 YGPEDDEWVDVR 606 + E+DEW++V+ Sbjct: 181 FEVEEDEWINVK 192
>tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Arabidopsis thaliana GN=At3g18380 PE=4 SV=1 Length = 349
Score = 127 bits (320), Expect = 4e-28 Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 20/192 (10%) Frame = +1
Query: 91 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 270 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 271 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 414 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 415 ATPTTPPSV-------EIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAG 570 TP S+ D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRFAG Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180
Query: 571 YGPEDDEWVDVR 606 + E+DEW++V+ Sbjct: 181 FEVEEDEWINVK 192
>tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 126 bits (317), Expect = 9e-28 Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 11/183 (6%) Frame = +1
Query: 91 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 270 MGRPPS P FRFLP+EV ++ + P VLQ L +KFS + E+ GK + Sbjct: 1 MGRPPSAGAPAFRFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPERAGKVAIQP 60
Query: 271 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSVE-- 444 +QV WFQNRR+ R + + K + S + + A ++ + Sbjct: 61 KQVWNWFQNRRYSHRAKTPRAASSPPAKMTPSGADHHQHAANASAFRAAQLSSVAAAHHG 120
Query: 445 --------IDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWV 597 ++ +VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW+ Sbjct: 121 SSSTGKNPVESVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWI 180
Query: 598 DVR 606 +VR Sbjct: 181 NVR 183
>tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1568_D07.5-1 PE=2 SV=1 Length = 370
Score = 124 bits (311), Expect = 4e-27 Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 4/176 (2%) Frame = +1
Query: 91 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 270 MGRPPS P FRF EV ++ + + + P V+Q L +KF+ + + GK V Sbjct: 1 MGRPPSTGGPAFRFTQAEVAEMEARLQQLNNAIPHRSVIQALADKFTSSPARSGKVAVQP 60
Query: 271 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATP-TTPPSVE- 444 +QV WFQNRR+ R ++ + L + + SP + A+ + PS + Sbjct: 61 KQVWNWFQNRRYSHRSRSSRGPPTLMQTKMLPTGSDEHKSPPFRAMPSASAHSGSPSGKG 120
Query: 445 -IDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVR 606 ++ VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW++VR Sbjct: 121 SLESGQVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWINVR 176
>tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 382
Score = 121 bits (304), Expect = 3e-26 Identities = 73/184 (39%), Positives = 102/184 (55%), Gaps = 12/184 (6%) Frame = +1
Query: 91 MGRPPSGE-MPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVN 267 MGRPPS P FRFLP+EV ++ + P +LQ L +KFS + E+ GK + Sbjct: 1 MGRPPSTTGAPAFRFLPSEVAEMEARLLQLNNGIPTRAMLQTLADKFSASPERAGKVAIQ 60
Query: 268 RRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSVEI 447 +QV WFQNRR+ R + + + K + S + + A P++ Sbjct: 61 PKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSGADHHQHAANASAFRAAQPSSVAVAHH 120
Query: 448 DMST----------VEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEW 594 S+ VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW Sbjct: 121 GSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEW 180
Query: 595 VDVR 606 ++VR Sbjct: 181 INVR 184
>tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 360
Score = 103 bits (257), Expect = 8e-21 Identities = 59/150 (39%), Positives = 84/150 (56%), Gaps = 11/150 (7%) Frame = +1
Query: 190 PPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSE 369 P +LQ L +KFS + E+ GK + +QV WFQNRR+ R + + + K + S Sbjct: 13 PTRAMLQTLADKFSASPERAGKVAIQPKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSG 72
Query: 370 RTQTTISPLSDDLDVATPTTPPSVEIDMST----------VEFEAKSSKDGAWYDVRTFL 519 + + A P++ S+ VEFEAKS++DGAWYDV FL Sbjct: 73 ADHHQHAANASAFRAAQPSSVAVAHHGSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFL 132
Query: 520 EHRMLDSG-PEVRVRFAGYGPEDDEWVDVR 606 HR+ +SG PEVRVRF+G+G E+DEW++VR Sbjct: 133 SHRLFESGDPEVRVRFSGFGAEEDEWINVR 162
>tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aestivum GN=HLRG PE=2 SV=1 Length = 337
Score = 92.4 bits (228), Expect = 2e-17 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 5/172 (2%) Frame = +1
Query: 106 SGEMP--VFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKA--REQDGKGCVNRR 273 +G+ P +FRF EV K+ + D P + V+Q L + F+ + R DGK V Sbjct: 2 TGQAPSLLFRFTDTEVAKMEEVLRDLNAM-PKHPVIQGLTDDFNASPDRSGDGKVPVQYN 60
Query: 274 QVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSVEIDM 453 QV WFQNRR Q+ K + + P++++ + + +D Sbjct: 61 QVRNWFQNRR---SAQSRKMM----------------VPPVAEEHHPVDGSYSGNSSLDG 101
Query: 454 STVEFEAKSSKDGAWYDVRTFLEHRMLDS-GPEVRVRFAGYGPEDDEWVDVR 606 V+FEAKS+ +GAWYDV FL HR + + PEV VRF GPE+DEW++VR Sbjct: 102 GHVQFEAKSAINGAWYDVAAFLSHRFIGTKDPEVLVRFTWLGPEEDEWINVR 153
>tr|A5C728|A5C728_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013721 PE=4 SV=1 Length = 266
Score = 89.0 bits (219), Expect = 2e-16 Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 7/171 (4%) Frame = +1
Query: 115 MPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQ 294 +P+ F +E+ ++ +L+E+ E QDL FS + G V ++V WFQ Sbjct: 6 VPIACFTQSEILEMENLFEEFGEETLGQEFCQDLATSFSASPGCSGNMSVGWKEVRDWFQ 65
Query: 295 NRRWYVRKQ------AEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSVEIDMS 456 ++ + + A + + L + + Q +I P D V D+S Sbjct: 66 TKQKELVARVTSSPVAPRGIDALPEAPMSNNAPQNSIVPRGD-----------MVAADLS 114
Query: 457 TVEFEAKSSKDGAWYDVRTFLEHRMLDSGP-EVRVRFAGYGPEDDEWVDVR 606 + +EAKSSKD AWYDV FL +R+L SG E RVRF+G+G E+DEWV+V+ Sbjct: 115 ELTYEAKSSKDDAWYDVAAFLTYRVLSSGELEARVRFSGFGNEEDEWVNVK 165
>tr|A7P748|A7P748_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034323001 PE=4 SV=1 Length = 247
Score = 88.2 bits (217), Expect = 3e-16 Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 7/171 (4%) Frame = +1
Query: 115 MPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQ 294 +P+ F +E+ ++ +L+E+ E QDL FS + G V ++V WFQ Sbjct: 6 VPIACFTQSEILEMENLFEEFGEETLGQEFCQDLATSFSASPGCSGNMPVGWKEVRDWFQ 65
Query: 295 NRRWYVRKQ------AEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSVEIDMS 456 ++ + + A + + L + + Q +I P D V D+S Sbjct: 66 TKQKELVARVTSSPVAPRGIDALPEAPMSNNAPQNSIVPRGD-----------MVAADLS 114
Query: 457 TVEFEAKSSKDGAWYDVRTFLEHRMLDSGP-EVRVRFAGYGPEDDEWVDVR 606 + +EAKSSKD AWYDV FL +R+L SG E RVRF+G+G E+DEWV+V+ Sbjct: 115 ELTYEAKSSKDDAWYDVAAFLTYRVLSSGELEARVRFSGFGNEEDEWVNVK 165
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