DK945059
Clone id YMU02A01NGRL0008_B10
Library
Length 266
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_B10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GGAGGTCGAAAGTGGAGGGGTGCCAAGGAAAAACATGGAAGAGTGAGGCAGGTTTTGTGT
GGTAGGTTTGAGAGACGTAGTAGGCTAGTGGCAATTAGAGTGACAGAAGAGAGGAGTAGG
TATGCATTGCGGATTGTGCGAGATTTCGAGTTGCAGAGTTGTTAACTTGTAAATCTGACA
AAAGGTTGCAACTTGTAAAGCTAGCTTTGGGAATGCTGAATGCTTCGTCTCACTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P48313
Definition sp|P48313|TERM_ADE40 DNA terminal protein OS=Human adenovirus F serotype 40
Align length 38
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945059|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_B10, 5'
(234 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P48313|TERM_ADE40 DNA terminal protein OS=Human adenovirus F ... 30 3.8

>sp|P48313|TERM_ADE40 DNA terminal protein OS=Human adenovirus F
serotype 40 GN=PTP PE=3 SV=1
Length = 646

Score = 30.0 bits (66), Expect = 3.8
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2

Query: 140 RTIRNAYL--LLSSVTLIATSLLRLSNLPHKTCLTLPC 33
R ++ AY L+SS+T A SL +PH T L+LPC
Sbjct: 232 RRLKTAYFNFLISSITSSAASL----RIPHATVLSLPC 265


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945059|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_B10, 5'
(234 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******