DK945068 |
Clone id |
YMU02A01NGRL0008_B23 |
Library |
YMU02 |
Length |
524 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_B23. 5' end sequence. |
Accession |
DK945068 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL36Contig1 |
Sequence |
CTCTCATTCCTTAACATCTGCTGCGGAATACTCGTCGGCGACAGCCATGGGTCGAAGACC TGCAAGGTGCTACCGGCAGATTAAAAACAAGCCATATCCAAAATCTCGTTACTGTAGGGG TGTACCCGACCCAAAAATTCGTATATATGATGTTGGCATGAAGAAAAAGGGTGTTGATGA GTTTCCCTTTTGTGTGCACCTTGTGAGTTGGGAGAAAGAAAATGTCTCCAGTGAAGGCCT GGAGGCAGCTCGTATTGCTTGCAACAAATACATGACAAAATTTGCTGGAAAGGATGCTTT TCATCTACGAGTTCGCGTGCACCCTTTCCATGTTCTTCGTATCAACAAGATGCTTTCATG TGCCGGAGCTGATAGGCTCCAGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCAGGGCAC TTGTGCGCGAGTTGACATTGGGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAATAATGG TATACATGCCCAGGAGGCCTTGCGTCGCGCTAAGTTCAGATTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
159 |
Score (bit) |
320.0 |
E-value |
3.0e-87 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
159 |
Score (bit) |
324.0 |
E-value |
2.0e-87 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945068|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_B23, 5' (524 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 324 2e-87 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 319 5e-86 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 319 5e-86 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 319 5e-86 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 319 5e-86 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 319 5e-86 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 319 5e-86 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 319 5e-86 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 318 1e-85 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 317 2e-85 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 317 2e-85 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 317 2e-85 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 317 3e-85 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 317 3e-85 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 316 4e-85 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 315 1e-84 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 315 1e-84 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 314 2e-84 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 313 3e-84 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 313 3e-84 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 313 3e-84 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 313 4e-84 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 312 7e-84 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 311 1e-83 tr|Q7X9L9|Q7X9L9_WHEAT QM (Fragment) OS=Triticum aestivum PE=2 SV=2 307 2e-82 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 306 4e-82 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 304 2e-81 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 301 1e-80 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 296 5e-79 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 293 4e-78
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 324 bits (830), Expect = 2e-87 Identities = 154/159 (96%), Positives = 156/159 (98%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQGTCARV+IGQVLLSVRCKD NG HAQEALRRAKF+F Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKF 159
>tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 319 bits (818), Expect = 5e-86 Identities = 151/159 (94%), Positives = 154/159 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKF+F Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKF 159
>tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 319 bits (818), Expect = 5e-86 Identities = 151/159 (94%), Positives = 154/159 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKF+F Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKF 159
>tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 319 bits (818), Expect = 5e-86 Identities = 151/159 (94%), Positives = 154/159 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKF+F Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKF 159
>tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 319 bits (818), Expect = 5e-86 Identities = 151/159 (94%), Positives = 154/159 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKF+F Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKF 159
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 319 bits (818), Expect = 5e-86 Identities = 150/159 (94%), Positives = 155/159 (97%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKF+F Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKF 159
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 319 bits (818), Expect = 5e-86 Identities = 150/159 (94%), Positives = 155/159 (97%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKF+F Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKF 159
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 319 bits (818), Expect = 5e-86 Identities = 150/159 (94%), Positives = 155/159 (97%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKF+F Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKF 159
>tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=QM PE=2 SV=1 Length = 216
Score = 318 bits (815), Expect = 1e-85 Identities = 151/159 (94%), Positives = 154/159 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKY+TKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYLTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKF+F Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKF 159
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 317 bits (812), Expect = 2e-85 Identities = 151/159 (94%), Positives = 153/159 (96%) Frame = +2
Query: 47 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 226 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 227 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 406 SSE LEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 407 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFRF 523 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKF+F Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDGNSNHAQEALRRAKFKF 159
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