BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945071|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_C03, 5'
         (385 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8R089|FBSH_MOUSE Probable fibrosin-1 long transcript protein...    30   2.8  
sp|A5UEH1|MNMC_HAEIG tRNA 5-methylaminomethyl-2-thiouridine bios...    29   6.5  
sp|O83767|Y788_TREPA Uncharacterized protein TP_0788 OS=Treponem...    29   8.2  

>sp|Q8R089|FBSH_MOUSE Probable fibrosin-1 long transcript protein
           OS=Mus musculus GN=Fbrs PE=2 SV=1
          Length = 378

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
 Frame = +3

Query: 138 LSPPPALKNFFKPFVCPAGQEVNEPGSWRF-------PRKPC*RRGLGFPPIKTAWRKQS 296
           L+ PP L     P    AG+E+  PG+          P  P     L  PP  TA     
Sbjct: 283 LAGPPRLAR--PPRFYEAGEELTGPGAMAAARLYSLDPAHPLLYSRLAPPPPPTATPG-- 338

Query: 297 FIKNPEGISKAIPGSLTGSPPNLV 368
               P  +SK  PG+L G+PP LV
Sbjct: 339 ---TPHLLSKTPPGALLGAPPPLV 359


>sp|A5UEH1|MNMC_HAEIG tRNA 5-methylaminomethyl-2-thiouridine
           biosynthesis bifunctional protein mnmC OS=Haemophilus
           influenzae (strain PittGG) GN=mnmC PE=3 SV=1
          Length = 670

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 254 TGFPTNKNGLAQTKLHKKSRRDFQGHP 334
           TGF T  N  A TKL +K R+  + HP
Sbjct: 64  TGFGTGLNFFAATKLFRKFRQQHENHP 90


>sp|O83767|Y788_TREPA Uncharacterized protein TP_0788 OS=Treponema
           pallidum GN=TP_0788 PE=4 SV=1
          Length = 296

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 311 GIFYEALFAPGRFYW-WETQSPS 246
           G ++ AL APGRF W WE   PS
Sbjct: 43  GGYHHALIAPGRFLWRWEPLLPS 65

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945071|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_C03, 5'
         (385 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2BF78|B2BF78_STRPU GnRH-like tetrapeptide OS=Strongylocentro...    34   3.2  
tr|A3BWC1|A3BWC1_ORYSJ Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|B2BF79|B2BF79_STRNU GnRH-like tetrapeptide (Fragment) OS=Stro...    34   4.2  

>tr|B2BF78|B2BF78_STRPU GnRH-like tetrapeptide OS=Strongylocentrotus
           purpuratus PE=2 SV=1
          Length = 316

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 337 PGMALEIPSGFFMKLCLRQAVFIGGK--PSPRL*QGFLGKRQEPGSLTSWPAGQ 182
           PG   + P+G        +  F+GG+  PSP L Q   GKRQ PG    WP G+
Sbjct: 96  PGGKRQFPAG--------KRQFVGGELIPSPELRQWPGGKRQWPGGKRQWPGGK 141


>tr|A3BWC1|A3BWC1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_027343 PE=4 SV=1
          Length = 345

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 24/72 (33%), Positives = 31/72 (43%)
 Frame = +3

Query: 144 PPPALKNFFKPFVCPAGQEVNEPGSWRFPRKPC*RRGLGFPPIKTAWRKQSFIKNPEGIS 323
           PP A+ +   PF  P  Q    P             GLGFPP  TAW     + +P+   
Sbjct: 12  PPQAVVSSTAPFAVPTSQAAPYPYG-----------GLGFPPPPTAW-----LASPQ--P 53

Query: 324 KAIPGSLTGSPP 359
           +A+PGS    PP
Sbjct: 54  QAMPGSSAFHPP 65


>tr|B2BF79|B2BF79_STRNU GnRH-like tetrapeptide (Fragment)
           OS=Strongylocentrotus nudus PE=2 SV=1
          Length = 174

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 337 PGMALEIPSGFFMKLCLRQAVFIGGK--PSPRL*QGFLGKRQEPGSLTSWPAGQ 182
           PG   + P+G        +  F+GG+  PSP L Q   GKRQ PG    WP G+
Sbjct: 53  PGGKRQYPAG--------KRQFVGGELIPSPELRQWPGGKRQWPGGKRQWPGGK 98