DK945075 [AcEST]

DK945075
Clone id	YMU02A01NGRL0008_C07
Library	YMU02
Length	405
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_C07. 5' end sequence.
Accession	DK945075
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	-
Sequence	GATGCCGTGGTATCAACGCTTAATGGCCATTACTGCCAGTAAGCTCTGGTATCTACTCAT AGTGGACGTTACGGCTCGGCCCCTTATTATACTGAACCAACTTTCTTTATGATTAAATGA ATGTTGTGTATTCATAATGTATTATTTAAAGTTACACTATTATTCTTCAAATACACGACA ATAAGTATGTTTTTTTGCAGGGTGTGATTGTTTGTAGGTGGATATGGTTTGCTTCTCCGT TTGTTACGTAATACCATTTCTTCTTCCAGGGAGTTAACTTTTGTGCTACATCTATGGGTA GACGTCTAAGATAGCTGACTCGTCGTCCCTCTCCCTCCTAGAAAAACTCTCGAAAACATT GTTTTAATACATGAATCCAGGTTTGTCATGATTATGGAACATCTT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6MEF6
Definition	sp\|Q6MEF6\|KCY_PARUW Cytidylate kinase OS=Protochlamydia amoebophila (strain UWE25)
Align length	45
Score (bit)	30.4
E-value	2.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945075\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_C07, 5' (405 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6MEF6\|KCY_PARUW Cytidylate kinase OS=Protochlamydia amoeboph... 30 2.8 sp\|Q6BNJ2\|PALI_DEBHA pH-response regulator protein palI/RIM9 OS=... 29 6.3 >sp\|Q6MEF6\|KCY_PARUW Cytidylate kinase OS=Protochlamydia amoebophila (strain UWE25) GN=cmk PE=3 SV=1 Length = 228 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 4/45 (8%) Frame = -1 Query: 138 IMNTQHSFNHKESWFSIIRGRAVTSTMSRYQSLLAV----MAIKR 16 I + +H F KE +IRG+ VTS++S+ ++ AV MAI+R Sbjct: 69 IHHDRHYFVDKEDVSKLIRGKEVTSSVSKVSAIKAVREKLMAIQR 113 >sp\|Q6BNJ2\|PALI_DEBHA pH-response regulator protein palI/RIM9 OS=Debaryomyces hansenii GN=RIM9 PE=3 SV=2 Length = 365 Score = 29.3 bits (64), Expect = 6.3 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 287 STKVNSLEEEMVLRNKRRSKPYPPTNNHTLQKNIL 183 +TK+NSL +E + N+R+SK P N L ++L Sbjct: 167 ATKMNSLSDEGTVDNERKSKDITPYLNFMLMLSLL 201
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q2BIC9
Definition	tr\|Q2BIC9\|Q2BIC9_9GAMM Periplasmic binding protein, putative OS=Neptuniibacter caesariensis
Align length	40
Score (bit)	33.1
E-value	7.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945075\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_C07, 5' (405 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q2BIC9\|Q2BIC9_9GAMM Periplasmic binding protein, putative OS=... 33 7.2 >tr\|Q2BIC9\|Q2BIC9_9GAMM Periplasmic binding protein, putative OS=Neptuniibacter caesariensis GN=MED92_11719 PE=4 SV=1 Length = 281 Score = 33.1 bits (74), Expect = 7.2 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 307 RRLPIDVAQKLTPWKKKWYYVTNGEANHIHLQTITPCKKT 188 R++ + K+ PWK+ WYYV G A+ I +T +KT Sbjct: 69 RKMGYEPEYKIMPWKRAWYYVQEGMADII----LTTSRKT 104