DK945082 |
Clone id |
YMU02A01NGRL0008_C16 |
Library |
YMU02 |
Length |
619 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_C16. 5' end sequence. |
Accession |
DK945082 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL47Contig1 |
Sequence |
CAACAGGGGGCCTCCACCTCGTTTTTCAGGTCCTGCTCCTCCCAGAGAACGAGTCTACAA GGACTATGCGCCGCAGTACTCTAGGGAGCGCCATGCTTCAGAAATTATCCCCCCTAGCTA TGCCCTTGTTCCAGATGTGGCCCATGCAGAAGCAGAGTTATTAAGGCAGAGGCACCTCAG ACAAGTCCAAGAAGAGGCTCTTGACAGGAGGGCTTATCTACTCGATCCTGTGGTTGAAGC TTCAATTGCTCGTAAACGGTACTTGGAGGATGTTTATTTGGCGGAACAGCAAGCCTTGGC TAAAAGGCCTCTTTTACCTGAAGTTTACAGAGATTTGGAGTACCAAAGAGAGGCCCCATA TCGGGGATATGCAGATGGTTTGCATGCACTCCCTTCCGCAGCTTTGCCTTATGATCCGCG GGGCTACTAGTCTTTGACTATGTCTATCTGACACCGACTTTTTATTTGATGGCTATTTCA ATGCTGAAGCTGACTTGGAACTGAAGCAGTTGGCTAGTTTGCCTGTTTACTATAGGGCCT TTTTGATGAGTTTTTGGAATTTGGAATCTTGTTAAAAGAAATGACTGCGCATATTTCTGT AAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6AW69 |
Definition |
sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus |
Align length |
35 |
Score (bit) |
34.7 |
E-value |
0.38 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9AVC2 |
Definition |
tr|A9AVC2|A9AVC2_HERA2 Putative uncharacterized protein OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) |
Align length |
142 |
Score (bit) |
38.1 |
E-value |
0.39 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945082|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_C16, 5' (600 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9AVC2|A9AVC2_HERA2 Putative uncharacterized protein OS=Herpe... 38 0.39 tr|B6SV62|B6SV62_MAIZE Rho GTPase activator OS=Zea mays PE=2 SV=1 37 0.67 tr|B8Q897|B8Q897_ORYSI SKIP interacting protein 11 (Fragment) OS... 37 0.87 tr|B8B5I6|B8B5I6_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.87 tr|Q69RJ1|Q69RJ1_ORYSJ Pleckstrin homology (PH) domain-containin... 37 1.1 tr|Q5QLP4|Q5QLP4_ORYSJ Pleckstrin homology (PH) domain-containin... 37 1.1 tr|Q0D3Z0|Q0D3Z0_ORYSJ Os07g0658300 protein OS=Oryza sativa subs... 37 1.1 tr|A3BN12|A3BN12_ORYSJ Putative uncharacterized protein OS=Oryza... 37 1.1 tr|B0DEY5|B0DEY5_LACBS Predicted protein OS=Laccaria bicolor (st... 37 1.1 tr|A8U9P8|A8U9P8_9LACT Hydrolase, haloacid dehalogenase-like fam... 36 1.5 tr|B2RY19|B2RY19_MOUSE Cgnl1 protein OS=Mus musculus GN=Cgnl1 PE... 35 4.3 tr|B2RSU6|B2RSU6_MOUSE Cingulin-like 1 OS=Mus musculus GN=Cgnl1 ... 35 4.3 tr|Q3SKK1|Q3SKK1_THIDA Nitric oxide reductase activase protein O... 35 4.3 tr|B0DHU1|B0DHU1_LACBS Predicted protein OS=Laccaria bicolor (st... 34 7.4 tr|A3LWR0|A3LWR0_PICST Predicted protein OS=Pichia stipitis GN=P... 34 7.4 tr|B2FR94|B2FR94_STRMK Putative thymidylate kinase OS=Stenotroph... 33 9.6 tr|B8KZV1|B8KZV1_9GAMM Thymidylate kinase OS=Stenotrophomonas sp... 33 9.6 tr|A3AI26|A3AI26_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.6 tr|A7RFY6|A7RFY6_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 9.6
>tr|A9AVC2|A9AVC2_HERA2 Putative uncharacterized protein OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=Haur_1970 PE=3 SV=1 Length = 734
Score = 38.1 bits (87), Expect = 0.39 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Frame = +2
Query: 53 VYKDYAPQYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEA---LDRRAYLL 223 ++++ A Q +++ + EIIP Y V + LL+Q HLRQV +EA + + ++L Sbjct: 38 LWQNVAEQDIQQKGSREIIPVVYRTVA----LDLNLLQQ-HLRQVPQEAQTKVQKSGFML 92
Query: 224 D-PVVEASIARKRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYADGLHALPSA 400 D P+ + + R +E +A + A PE+ L + P SA Sbjct: 93 DLPLPDGQFGKFRVVESPIMAPELAAK----FPEIRTFLAQSVDQP----------ATSA 138
Query: 401 ALPYDPRGY*SLTMSI*HRLFI 466 L PRG+ + +S R+FI Sbjct: 139 RLDITPRGFHGMILSESGRIFI 160
>tr|B6SV62|B6SV62_MAIZE Rho GTPase activator OS=Zea mays PE=2 SV=1 Length = 871
Score = 37.4 bits (85), Expect = 0.67 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 3/110 (2%) Frame = +2
Query: 74 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 253 Q S ER + AL DV+ + +L +R LR E L + + Sbjct: 609 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSGQFSSARSMDVKT 668
Query: 254 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYADG---LHALP 394 K LE++ LAE + + E++ L QR+ Y D H LP Sbjct: 669 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSVVDANDRHHRLP 718
>tr|B8Q897|B8Q897_ORYSI SKIP interacting protein 11 (Fragment) OS=Oryza sativa subsp. indica GN=SIP11 PE=2 SV=1 Length = 812
Score = 37.0 bits (84), Expect = 0.87 Identities = 27/101 (26%), Positives = 41/101 (40%) Frame = +2
Query: 74 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 253 Q S ER + AL DV+ + +L +R LR E L + + Sbjct: 553 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAQISSSRSMDSKT 612
Query: 254 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 376 K LE++ LAE + + E++ L QR+ Y AD Sbjct: 613 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 653
>tr|B8B5I6|B8B5I6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27182 PE=4 SV=1 Length = 870
Score = 37.0 bits (84), Expect = 0.87 Identities = 27/101 (26%), Positives = 41/101 (40%) Frame = +2
Query: 74 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 253 Q S ER + AL DV+ + +L +R LR E L + + Sbjct: 611 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAQISSSRSMDSKT 670
Query: 254 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 376 K LE++ LAE + + E++ L QR+ Y AD Sbjct: 671 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 711
>tr|Q69RJ1|Q69RJ1_ORYSJ Pleckstrin homology (PH) domain-containing protein-like OS=Oryza sativa subsp. japonica GN=P0047B07.132-1 PE=4 SV=1 Length = 872
Score = 36.6 bits (83), Expect = 1.1 Identities = 27/101 (26%), Positives = 41/101 (40%) Frame = +2
Query: 74 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 253 Q S ER + AL DV+ + +L +R LR E L + + Sbjct: 612 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 671
Query: 254 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 376 K LE++ LAE + + E++ L QR+ Y AD Sbjct: 672 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 712
>tr|Q5QLP4|Q5QLP4_ORYSJ Pleckstrin homology (PH) domain-containing protein-like OS=Oryza sativa subsp. japonica GN=OJ1477_F01.111-2 PE=4 SV=1 Length = 751
Score = 36.6 bits (83), Expect = 1.1 Identities = 27/101 (26%), Positives = 41/101 (40%) Frame = +2
Query: 74 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 253 Q S ER + AL DV+ + +L +R LR E L + + Sbjct: 612 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 671
Query: 254 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 376 K LE++ LAE + + E++ L QR+ Y AD Sbjct: 672 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 712
>tr|Q0D3Z0|Q0D3Z0_ORYSJ Os07g0658300 protein OS=Oryza sativa subsp. japonica GN=Os07g0658300 PE=2 SV=1 Length = 871
Score = 36.6 bits (83), Expect = 1.1 Identities = 27/101 (26%), Positives = 41/101 (40%) Frame = +2
Query: 74 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 253 Q S ER + AL DV+ + +L +R LR E L + + Sbjct: 612 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 671
Query: 254 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 376 K LE++ LAE + + E++ L QR+ Y AD Sbjct: 672 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 712
>tr|A3BN12|A3BN12_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024434 PE=4 SV=1 Length = 875
Score = 36.6 bits (83), Expect = 1.1 Identities = 27/101 (26%), Positives = 41/101 (40%) Frame = +2
Query: 74 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 253 Q S ER + AL DV+ + +L +R LR E L + + Sbjct: 616 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 675
Query: 254 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 376 K LE++ LAE + + E++ L QR+ Y AD Sbjct: 676 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 716
>tr|B0DEY5|B0DEY5_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_294592 PE=4 SV=1 Length = 549
Score = 36.6 bits (83), Expect = 1.1 Identities = 23/71 (32%), Positives = 36/71 (50%) Frame = +2
Query: 134 DVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQALAKRPL 313 + A EL RQ H +++EE +RRA L V +RY E++ +QQ A + Sbjct: 337 EAQRAREELERQAHEARIREEEANRRAAL--EVQAREEEARRYAEEMARMQQQVEAHQAR 394
Query: 314 LPEVYRDLEYQ 346 P ++RD+ Q Sbjct: 395 EPRLWRDVSMQ 405
>tr|A8U9P8|A8U9P8_9LACT Hydrolase, haloacid dehalogenase-like family protein OS=Carnobacterium sp. AT7 GN=CAT7_07113 PE=4 SV=1 Length = 269
Score = 36.2 bits (82), Expect = 1.5 Identities = 26/86 (30%), Positives = 39/86 (45%) Frame = +2
Query: 161 LRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQALAKRPLLPEVYRDLE 340 L + +LR+V + + L+ + K+ L V + E AL+K +P + DLE Sbjct: 53 LEELNLREVGDYGITYNGGLVQRTDTGEVLSKKTLTKVEIEEIFALSKEINVPCNFIDLE 112
Query: 341 YQREAPYRGYADGLHALPSAALPYDP 418 E PY D L+ ALPY P Sbjct: 113 KIYEPPYPEGRDSLYPTVMRALPYVP 138
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