BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945102|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_D20, 5'
         (263 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q85FG7|YCF1_ADICA Putative membrane protein ycf1 OS=Adiantum ...   145   6e-35
sp|Q85B66|YCF1A_ANTFO Putative membrane protein ycf1 N-terminal ...    38   0.018
sp|Q5PNZ1|ZDH21_ARATH Probable S-acyltransferase At5g05070 OS=Ar...    30   5.0  
sp|Q99062|CSF3R_HUMAN Granulocyte colony-stimulating factor rece...    30   5.0  
sp|P40223|CSF3R_MOUSE Granulocyte colony-stimulating factor rece...    29   6.5  

>sp|Q85FG7|YCF1_ADICA Putative membrane protein ycf1 OS=Adiantum
           capillus-veneris GN=ycf1 PE=2 SV=2
          Length = 1691

 Score =  145 bits (366), Expect = 6e-35
 Identities = 74/87 (85%), Positives = 74/87 (85%)
 Frame = +2

Query: 2   NWVSKKLAKTKFFEKELTDQIKLLDTGSSFSKTMSXXXXXXXXXXXXIPRTYDPFVNNFR 181
           NWVSKKLAKTKFFEKELTDQIKLLDTGSSFSKTMS            IPRTYDPFVNNFR
Sbjct: 340 NWVSKKLAKTKFFEKELTDQIKLLDTGSSFSKTMSRKTRLMGGKRRRIPRTYDPFVNNFR 399

Query: 182 IRIPVSQTFLLEDDLGLSLREWDKLAT 262
           IRIPVSQTFLLEDDLGLSL EWDKLAT
Sbjct: 400 IRIPVSQTFLLEDDLGLSLWEWDKLAT 426


>sp|Q85B66|YCF1A_ANTFO Putative membrane protein ycf1 N-terminal
           part OS=Anthoceros formosae GN=ycf1 PE=2 SV=1
          Length = 1031

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +2

Query: 5   WVSKKLAKTKFFEKELTDQIKLLDTGSSFSKTMSXXXXXXXXXXXXIP-RTYDPFVN-NF 178
           W++ K  +      E+ ++IK LD G S    +             IP +TYDPF++  F
Sbjct: 341 WINTKKEQKDDLYSEVEERIKALDNGFSLEHAIEKRIGFSSINKEDIPNKTYDPFLDGEF 400

Query: 179 RIRIPVSQTFLLEDDLGLSLREWDKL 256
           R ++ VSQ+ LL       L +  KL
Sbjct: 401 RGKVAVSQSPLLLTGKSYGLTKTQKL 426


>sp|Q5PNZ1|ZDH21_ARATH Probable S-acyltransferase At5g05070
           OS=Arabidopsis thaliana GN=At5g05070 PE=2 SV=1
          Length = 413

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +2

Query: 68  LLDTGSSFSKTMSXXXXXXXXXXXXIPRTYDPFVNNFRIRIPVSQTFLL 214
           +L+  S  S T S            IPRT D FVN + I++    T LL
Sbjct: 130 ILEDDSDSSLTQSMEWVNNKTPNLKIPRTKDVFVNGYTIKVKFCDTCLL 178


>sp|Q99062|CSF3R_HUMAN Granulocyte colony-stimulating factor
           receptor OS=Homo sapiens GN=CSF3R PE=1 SV=1
          Length = 836

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 205 CL*NWNSYAEVIDKGVIGAGYSPPFTAHLSC 113
           C  NW +  +++D+  + AGY P    +LSC
Sbjct: 101 CCLNWGNSLQILDQVELRAGYPPAIPHNLSC 131


>sp|P40223|CSF3R_MOUSE Granulocyte colony-stimulating factor
           receptor OS=Mus musculus GN=Csf3r PE=1 SV=1
          Length = 837

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 205 CL*NWNSYAEVIDKGVIGAGYSPPFTAHLSC 113
           CL  W    +++D+  + AGY P   ++LSC
Sbjct: 102 CLVPWEDSVQLLDQAELHAGYPPASPSNLSC 132

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945102|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_D20, 5'
         (263 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1NTT1|B1NTT1_TRACE Hypothetical chloroplast RF19 OS=Tracheli...    36   0.84 

>tr|B1NTT1|B1NTT1_TRACE Hypothetical chloroplast RF19 OS=Trachelium
           caeruleum GN=ycf1 PE=4 SV=1
          Length = 2136

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +2

Query: 2   NWVSKKLAKTKFFEKELTDQIKLLDTGSSFSKTMS--XXXXXXXXXXXXIPRTYDPFVN 172
           NW+     KTK F  EL  +I+ LDTG  F   +               +P  YDPF+N
Sbjct: 448 NWLENNKEKTKNFNNELKKRIEALDTGFLFRDILDKRTRVCTDQTLKTCLPTKYDPFLN 506