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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945106
Clone id YMU02A01NGRL0008_D24
Library
Length 289
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_D24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GATGGCAGAACGGTGCCATGCAACTAATCAGGTTGAGATGATCTACAAGATTGTGGCACA
CATGGCCTCAAATGACCGTATTATCATCACAGAAGGATTGTGTGGTTCGCCAAAAAGCAT
CAAGGTTTACTCCGGAGAATGCAATGTTGAGAATTTGTATATAAATTTATCTTAAATTTT
TCCTGAGCAAATTTTTTCCTTTGCCTCAGCAGTCCTTGTACATTATCCAATTTAATTCAA
GCCATCTTTTGTAATTAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q3M6S3
Definition sp|Q3M6S3|G6PI_ANAVT Glucose-6-phosphate isomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Align length 42
Score (bit) 43.1
E-value 0.0004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945106|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_D24, 5'
         (256 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3M6S3|G6PI_ANAVT Glucose-6-phosphate isomerase OS=Anabaena v...    43   4e-04
sp|Q8YY05|G6PI_ANASP Glucose-6-phosphate isomerase OS=Anabaena s...    43   6e-04
sp|P52983|G6PI_SYNY3 Glucose-6-phosphate isomerase OS=Synechocys...    37   0.039
sp|B0CCT9|G6PI_ACAM1 Glucose-6-phosphate isomerase OS=Acaryochlo...    35   0.15 
sp|B0JVE7|G6PI_MICAN Glucose-6-phosphate isomerase OS=Microcysti...    34   0.20 
sp|Q8DKY2|G6PI_THEEB Glucose-6-phosphate isomerase OS=Thermosyne...    29   8.2  

>sp|Q3M6S3|G6PI_ANAVT Glucose-6-phosphate isomerase OS=Anabaena
           variabilis (strain ATCC 29413 / PCC 7937) GN=pgi PE=3
           SV=1
          Length = 528

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKV 127
           +AE+  A +QVE IYKI+ H+ +N R ++ +G  G P S+KV
Sbjct: 484 IAEKIGAADQVEAIYKILRHLQANQRGVVFQGNLGQPSSLKV 525


>sp|Q8YY05|G6PI_ANASP Glucose-6-phosphate isomerase OS=Anabaena sp.
           (strain PCC 7120) GN=pgi PE=3 SV=1
          Length = 528

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKV 127
           +AE+  A +QVE IYKI+ H+ +N R ++ +G  G P S+K+
Sbjct: 484 IAEKIGAADQVEAIYKILRHLQANQRGVVFQGNLGQPSSLKI 525


>sp|P52983|G6PI_SYNY3 Glucose-6-phosphate isomerase OS=Synechocystis
           sp. (strain PCC 6803) GN=pgi PE=3 SV=1
          Length = 531

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKV 127
           +A +  A  QVE +YKIV H+A+NDR +  +G    P+ +++
Sbjct: 486 LATKVQAPEQVETVYKIVRHLAANDRGVTLQGDRQFPQRLQI 527


>sp|B0CCT9|G6PI_ACAM1 Glucose-6-phosphate isomerase OS=Acaryochloris
           marina (strain MBIC 11017) GN=pgi PE=3 SV=1
          Length = 529

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKV 127
           +A++  A +++E +YKIV H+A+N R +   G    P S++V
Sbjct: 484 LADKAEAPDKIETVYKIVRHLAANKRGVELYGNPAEPGSLQV 525


>sp|B0JVE7|G6PI_MICAN Glucose-6-phosphate isomerase OS=Microcystis
           aeruginosa (strain NIES-843) GN=pgi PE=3 SV=1
          Length = 524

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKV 127
           +A +  A++QVE IYKIV H+ +N R +   G    P+++++
Sbjct: 480 LAAKIGASDQVEAIYKIVRHLNANRRSLTITGDLSKPETLQI 521


>sp|Q8DKY2|G6PI_THEEB Glucose-6-phosphate isomerase
           OS=Thermosynechococcus elongatus (strain BP-1) GN=pgi
           PE=3 SV=1
          Length = 529

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIK 124
           +A   +A +Q+E IY I+ H+A+NDR I   G    P  ++
Sbjct: 484 IAGAINAPDQLERIYLILRHLAANDRGIEQLGDPAQPSQLQ 524
tr_hit_id Q9SEJ5
Definition tr|Q9SEJ5|Q9SEJ5_ARATH Glucose-6-phosphate isomerase OS=Arabidopsis thaliana
Align length 53
Score (bit) 88.2
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945106|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_D24, 5'
         (256 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SEJ5|Q9SEJ5_ARATH Glucose-6-phosphate isomerase OS=Arabidop...    88   2e-16
tr|Q9SB57|Q9SB57_ARATH Glucose-6-phosphate isomerase OS=Arabidop...    88   2e-16
tr|Q8H103|Q8H103_ARATH Glucose-6-phosphate isomerase OS=Arabidop...    88   2e-16
tr|B8LKU0|B8LKU0_PICSI Putative uncharacterized protein OS=Picea...    87   4e-16
tr|Q68HC8|Q68HC8_SOLLC Glucose-6-phosphate isomerase OS=Solanum ...    85   2e-15
tr|A7NUP2|A7NUP2_VITVI Glucose-6-phosphate isomerase OS=Vitis vi...    84   4e-15
tr|O82058|O82058_SPIOL Glucose-6-phosphate isomerase OS=Spinacia...    82   2e-14
tr|Q76E42|Q76E42_ORYSJ Glucose-6-phosphate isomerase OS=Oryza sa...    80   4e-14
tr|Q6YXI1|Q6YXI1_ORYSJ Glucose-6-phosphate isomerase OS=Oryza sa...    80   4e-14
tr|B8BCM8|B8BCM8_ORYSI Putative uncharacterized protein OS=Oryza...    80   4e-14
tr|Q6ZB94|Q6ZB94_ORYSJ Glucose-6-phosphate isomerase OS=Oryza sa...    80   5e-14
tr|B6SWT4|B6SWT4_MAIZE Glucose-6-phosphate isomerase OS=Zea mays...    80   5e-14
tr|B4FQC6|B4FQC6_MAIZE Putative uncharacterized protein OS=Zea m...    80   5e-14
tr|A3BU52|A3BU52_ORYSJ Glucose-6-phosphate isomerase OS=Oryza sa...    80   5e-14
tr|A2YWA4|A2YWA4_ORYSI Glucose-6-phosphate isomerase OS=Oryza sa...    80   5e-14
tr|A9S7W2|A9S7W2_PHYPA Glucose-6-phosphate isomerase OS=Physcomi...    76   1e-12
tr|A3BZP7|A3BZP7_ORYSJ Glucose-6-phosphate isomerase OS=Oryza sa...    69   2e-10
tr|B4W435|B4W435_9CYAN Glucose-6-phosphate isomerase OS=Microcol...    46   0.001
tr|B4B7C9|B4B7C9_9CHRO Glucose-6-phosphate isomerase OS=Cyanothe...    41   0.034
tr|A0ZBA6|A0ZBA6_NODSP Glucose-6-phosphate isomerase OS=Nodulari...    40   0.045
tr|B7JUF5|B7JUF5_SYNP8 Glucose-6-phosphate isomerase OS=Synechoc...    39   0.100
tr|B4BX54|B4BX54_9CHRO Glucose-6-phosphate isomerase OS=Cyanothe...    39   0.100
tr|B7KJ74|B7KJ74_9CHRO Glucose-6-phosphate isomerase OS=Cyanothe...    39   0.17 
tr|A0YJN8|A0YJN8_9CYAN Glucose-6-phosphate isomerase OS=Lyngbya ...    39   0.17 
tr|Q10XI2|Q10XI2_TRIEI Glucose-6-phosphate isomerase OS=Trichode...    38   0.22 
tr|B1XJ25|B1XJ25_SYNP2 Glucose-6-phosphate isomerase OS=Synechoc...    38   0.22 
tr|Q4C469|Q4C469_CROWT Glucose-6-phosphate isomerase OS=Crocosph...    37   0.49 
tr|B2J5F1|B2J5F1_NOSP7 Phosphoglucose isomerase (PGI) OS=Nostoc ...    35   1.4  
tr|B1WQ95|B1WQ95_CYAA5 Glucose-6-phosphate isomerase OS=Cyanothe...    35   1.4  
tr|A8YF09|A8YF09_MICAE Glucose-6-phosphate isomerase OS=Microcys...    35   1.9  

>tr|Q9SEJ5|Q9SEJ5_ARATH Glucose-6-phosphate isomerase OS=Arabidopsis
           thaliana GN=PGI PE=3 SV=1
          Length = 612

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 36/53 (67%), Positives = 48/53 (90%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVENLY 160
           +A+RCHA  ++EMIYKI+AHM++NDR++I EG CGSP+SIKVY GECNV++LY
Sbjct: 559 IADRCHAPEEIEMIYKIIAHMSANDRVLIAEGNCGSPRSIKVYLGECNVDDLY 611


>tr|Q9SB57|Q9SB57_ARATH Glucose-6-phosphate isomerase OS=Arabidopsis
           thaliana GN=F22K18.180 PE=3 SV=1
          Length = 611

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 36/53 (67%), Positives = 48/53 (90%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVENLY 160
           +A+RCHA  ++EMIYKI+AHM++NDR++I EG CGSP+SIKVY GECNV++LY
Sbjct: 558 IADRCHAPEEIEMIYKIIAHMSANDRVLIAEGNCGSPRSIKVYLGECNVDDLY 610


>tr|Q8H103|Q8H103_ARATH Glucose-6-phosphate isomerase OS=Arabidopsis
           thaliana GN=At4g24620 PE=2 SV=1
          Length = 613

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 36/53 (67%), Positives = 48/53 (90%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVENLY 160
           +A+RCHA  ++EMIYKI+AHM++NDR++I EG CGSP+SIKVY GECNV++LY
Sbjct: 560 IADRCHAPEEIEMIYKIIAHMSANDRVLIAEGNCGSPRSIKVYLGECNVDDLY 612


>tr|B8LKU0|B8LKU0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 634

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVENLYINL 169
           +AERCHA  Q+EMIYKIV+H+A+NDR +I EG CGSP SIKV+S ECNVE+LY  +
Sbjct: 579 IAERCHAVEQIEMIYKIVSHIAANDRALIAEGSCGSPSSIKVFSEECNVEDLYTEI 634


>tr|Q68HC8|Q68HC8_SOLLC Glucose-6-phosphate isomerase OS=Solanum
           lycopersicum GN=GPI PE=2 SV=1
          Length = 617

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 36/53 (67%), Positives = 45/53 (84%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVENLY 160
           +AERCH  + +EMIYKI+AHMA+NDR +I EG CG+P SIKVY GECNV++LY
Sbjct: 564 IAERCHCEDDIEMIYKIIAHMAANDRALIAEGNCGTPHSIKVYLGECNVDDLY 616


>tr|A7NUP2|A7NUP2_VITVI Glucose-6-phosphate isomerase OS=Vitis
           vinifera GN=GSVIVT00015125001 PE=3 SV=1
          Length = 623

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 36/53 (67%), Positives = 45/53 (84%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVENLY 160
           +AERCHA   +EMIYKI+AHMA+NDR +I EG CGSP+SIKV+ GEC V++LY
Sbjct: 570 VAERCHAPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSIKVFLGECYVDDLY 622


>tr|O82058|O82058_SPIOL Glucose-6-phosphate isomerase OS=Spinacia
           oleracea GN=GPIP PE=2 SV=1
          Length = 618

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 33/53 (62%), Positives = 44/53 (83%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVENLY 160
           +A+ CH  + +EMIYKI+AHMA+NDR+I+ EG CGSP+SIK + GECNV+ LY
Sbjct: 565 VADHCHCPDDIEMIYKIIAHMAANDRVILAEGDCGSPRSIKAFLGECNVDELY 617


>tr|Q76E42|Q76E42_ORYSJ Glucose-6-phosphate isomerase OS=Oryza
           sativa subsp. japonica PE=2 SV=1
          Length = 624

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVE 151
           +AERCH    +EMIYKI+ HMA+NDR +I EG CGSP+SIKVY GECNV+
Sbjct: 569 IAERCHCPEDIEMIYKIIQHMAANDRALIAEGSCGSPRSIKVYLGECNVD 618


>tr|Q6YXI1|Q6YXI1_ORYSJ Glucose-6-phosphate isomerase OS=Oryza
           sativa subsp. japonica GN=OJ1005_D12.17 PE=3 SV=1
          Length = 625

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVE 151
           +AERCH    +EMIYKI+ HMA+NDR +I EG CGSP+SIKVY GECNV+
Sbjct: 570 IAERCHCPEDIEMIYKIIQHMAANDRALIAEGSCGSPRSIKVYLGECNVD 619


>tr|B8BCM8|B8BCM8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31689 PE=4 SV=1
          Length = 625

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = +2

Query: 2   MAERCHATNQVEMIYKIVAHMASNDRIIITEGLCGSPKSIKVYSGECNVE 151
           +AERCH    +EMIYKI+ HMA+NDR +I EG CGSP+SIKVY GECNV+
Sbjct: 570 IAERCHCPEDIEMIYKIIQHMAANDRALIAEGSCGSPRSIKVYLGECNVD 619