DK945109
Clone id YMU02A01NGRL0008_E03
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_E03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
TGGCAGTGTCAGGCATTCTGTTATCCTAGATATGGCTTAACAAACTGACTGATGAATGGT
CACCCTAAACGCAAAAGTGAATTTTGTTTTTGAAGTAGGGTGTTTTCCATTTATGCCACT
GCATGGGTAAAGAACTTCTCTAGCGCTTGCAATGGCAGAGATACAGGAGTGCCTTGTAAA
TACCATTTCAAAGTCCTATGCCTCCCTTTATTTCTTTCTGTGGATGAAAGTGTTGAGTCT
AAATGGGTCATAGAGAAATGCAGAGAGCTTTGAAGCTATCAAGGCATTGACACCAAGAAA
TGGTATCAATGTGATTGCGTTTCTTAACATTGCCTTTCTTATGATGAACGTCATCATAAC
ATTGCCTTTGTTATAGAAACACTGAAGATTATAATTCAAATGGCTTTTCTTTTGCATAAT
TATTTTGAACTGTTCAGAATCAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
■■Homology search results ■■ -
sp_hit_id A8MVM7
Definition sp|A8MVM7|YD021_HUMAN Putative uncharacterized protein ENSP00000382790 OS=Homo sapiens
Align length 63
Score (bit) 31.2
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945109|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_E03, 5'
(441 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8MVM7|YD021_HUMAN Putative uncharacterized protein ENSP00000... 31 2.0
sp|Q3TNU4|YD021_MOUSE Putative uncharacterized protein ENSP00000... 30 4.5
sp|Q9EQH5|CTBP2_RAT C-terminal-binding protein 2 OS=Rattus norve... 30 5.9
sp|P56546|CTBP2_MOUSE C-terminal-binding protein 2 OS=Mus muscul... 30 5.9
sp|P56545|CTBP2_HUMAN C-terminal-binding protein 2 OS=Homo sapie... 30 5.9
sp|Q0VCQ1|CTBP2_BOVIN C-terminal-binding protein 2 OS=Bos taurus... 30 5.9
sp|Q6UXV0|GFRAL_HUMAN GDNF family receptor alpha-like OS=Homo sa... 29 10.0

>sp|A8MVM7|YD021_HUMAN Putative uncharacterized protein
ENSP00000382790 OS=Homo sapiens PE=5 SV=3
Length = 634

Score = 31.2 bits (69), Expect = 2.0
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -1

Query: 426 KIIMQKKSHLNYNLQCFYNKGNVMMTFIIRKAMLRNAITLIPFLGVNALIASKLSAFLYD 247
K++ QKK LN F ++RKA RN + +I G+ + +K S F
Sbjct: 191 KMLFQKKYDLNELCTWFMQTTETQSLSLVRKANARNPLEVINTRGIK--LGTKYSDFNAS 248

Query: 246 PFR 238
PFR
Sbjct: 249 PFR 251


>sp|Q3TNU4|YD021_MOUSE Putative uncharacterized protein
ENSP00000382790 homolog OS=Mus musculus PE=5 SV=1
Length = 584

Score = 30.0 bits (66), Expect = 4.5
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -1

Query: 426 KIIMQKKSHLNYNLQCFYNKGNVMMTFIIRKAMLRNAITLIPFLGVNALIASKLSAFLYD 247
K++ QKK +LN F ++RKA RN + +I G+ + K F
Sbjct: 207 KMLFQKKYNLNELCTWFMQTTETQSLSLVRKANARNPLEVISTKGIK--LGVKCCGFNAS 264

Query: 246 PFR 238
PFR
Sbjct: 265 PFR 267


>sp|Q9EQH5|CTBP2_RAT C-terminal-binding protein 2 OS=Rattus
norvegicus GN=Ctbp2 PE=1 SV=2
Length = 445

Score = 29.6 bits (65), Expect = 5.9
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1

Query: 304 YQCDCVS*HCLSYDERHHNIAFVIETLKIIIQMAFLLH 417
YQ DCVS HC + HH I T+K + Q AFL++
Sbjct: 234 YQSDCVSLHCNLNEHNHHLINDF--TIKQMRQGAFLVN 269


>sp|P56546|CTBP2_MOUSE C-terminal-binding protein 2 OS=Mus musculus
GN=Ctbp2 PE=1 SV=2
Length = 445

Score = 29.6 bits (65), Expect = 5.9
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1

Query: 304 YQCDCVS*HCLSYDERHHNIAFVIETLKIIIQMAFLLH 417
YQ DCVS HC + HH I T+K + Q AFL++
Sbjct: 234 YQSDCVSLHCNLNEHNHHLINDF--TIKQMRQGAFLVN 269


>sp|P56545|CTBP2_HUMAN C-terminal-binding protein 2 OS=Homo sapiens
GN=CTBP2 PE=1 SV=1
Length = 445

Score = 29.6 bits (65), Expect = 5.9
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1

Query: 304 YQCDCVS*HCLSYDERHHNIAFVIETLKIIIQMAFLLH 417
YQ DCVS HC + HH I T+K + Q AFL++
Sbjct: 234 YQSDCVSLHCNLNEHNHHLINDF--TIKQMRQGAFLVN 269


>sp|Q0VCQ1|CTBP2_BOVIN C-terminal-binding protein 2 OS=Bos taurus
GN=CTBP2 PE=1 SV=1
Length = 445

Score = 29.6 bits (65), Expect = 5.9
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1

Query: 304 YQCDCVS*HCLSYDERHHNIAFVIETLKIIIQMAFLLH 417
YQ DCVS HC + HH I T+K + Q AFL++
Sbjct: 234 YQSDCVSLHCNLNEHNHHLINDF--TIKQMRQGAFLVN 269


>sp|Q6UXV0|GFRAL_HUMAN GDNF family receptor alpha-like OS=Homo
sapiens GN=GFRAL PE=2 SV=2
Length = 394

Score = 28.9 bits (63), Expect = 10.0
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1

Query: 121 AWVKNFSSACNGRDTGVPCKYHFKVLCLPLFLSVDESVESKWVIEKC 261
AW + ACN D G PCK C LS+ VES + ++C
Sbjct: 41 AW-RVMEDACNDSDPGDPCKMRNSSYC---NLSIQYLVESNFQFKEC 83


tr_hit_id A5ZE71
Definition tr|A5ZE71|A5ZE71_9BACE Putative uncharacterized protein OS=Bacteroides caccae ATCC 43185
Align length 29
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945109|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_E03, 5'
(441 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5ZE71|A5ZE71_9BACE Putative uncharacterized protein OS=Bacte... 33 9.2

>tr|A5ZE71|A5ZE71_9BACE Putative uncharacterized protein
OS=Bacteroides caccae ATCC 43185 GN=BACCAC_01183 PE=4
SV=1
Length = 184

Score = 32.7 bits (73), Expect = 9.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3

Query: 355 DDVHHKKGNVKKRNHIDTISWCQCLDSFK 269
+ V+HK GN K NH+D + WC D+ K
Sbjct: 96 EQVNHKDGN-KCNNHVDNLEWCSRSDNLK 123