DK945113 |
Clone id |
YMU02A01NGRL0008_E10 |
Library |
YMU02 |
Length |
435 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_E10. 5' end sequence. |
Accession |
DK945113 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL15Contig1 |
Sequence |
GCATACAGAGGTTCTTCCTTCCTTGACCCTAAGGGCCGTGGTGGCTCCCAAGGATATGAC AACGCTGTGGCTATTCCTGCTGGAGGTGCTGGTGATGAGGAAGAGCTAGCGAAGGAGAAT AACAAGGATACAACCGCTCTTAATGGCAAAATCACATTCAGTGTTGCTAAAACCAACCTT GAAACTGGGGAGATTGGTGGTGTCTTTGAAAGTGTTCAGCCTTCTGATACTGACCTTGGC TCTAAAGCCCCCAAAGATGTCAAGATTCAGGGTATTTGGTATGCGCAAGTAGAGTAGACG GAGAAAACTTGGGGTCTTTCCTTTCGCAAGGCCCTGGCTTGACCCTGTCCTTGTTTCTAT ATTGTTATGTAAAGCAAAGTTCTGAAAAAAGGTGCCTGTTCATTGAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P26320 |
Definition |
sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum |
Align length |
98 |
Score (bit) |
164.0 |
E-value |
2.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945113|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_E10, 5' (405 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 164 2e-40 sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 162 4e-40 sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 160 2e-39 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 159 3e-39 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 158 9e-39 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 154 1e-37 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 154 2e-37 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 153 3e-37 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 145 6e-35 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 142 7e-34 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 140 1e-33 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 138 1e-32 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 118 1e-26 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 106 4e-23 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 100 3e-21 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 100 4e-21 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 100 4e-21 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 98 1e-20 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 62 9e-10 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 40 0.004 sp|P81665|PSBO_PINPS Oxygen-evolving enhancer protein 1 (Fragmen... 35 0.088 sp|P24506|SY62_DISOM Synaptotagmin-B OS=Discopyge ommata GN=P65-... 31 2.2 sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Pichia g... 31 2.2 sp|Q9XD84|TIBA_ECOLX Adhesin/invasin tibA OS=Escherichia coli GN... 30 3.7 sp|P29227|HP1_DROVI Heterochromatin protein 1 OS=Drosophila viri... 30 4.8 sp|P32644|ECM32_YEAST Putative ATP-dependent RNA helicase ECM32 ... 30 4.8 sp|O13359|KEX2_CANAL Kexin OS=Candida albicans GN=KEX2 PE=3 SV=1 29 6.3 sp|Q8XWX9|FTSK2_RALSO DNA translocase ftsK 2 OS=Ralstonia solana... 29 8.2 sp|Q9C4B4|CSG_HALJP Cell surface glycoprotein OS=Haloarcula japo... 29 8.2 sp|Q32Q86|CRY1_RAT Cryptochrome-1 OS=Rattus norvegicus GN=Cry1 P... 29 8.2
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 164 bits (414), Expect = 2e-40 Identities = 77/98 (78%), Positives = 88/98 (89%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T +L GKITF+V K+N Sbjct: 235 SYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNP 294
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 +TGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E Sbjct: 295 QTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 162 bits (411), Expect = 4e-40 Identities = 78/98 (79%), Positives = 86/98 (87%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN KD ++ GKIT SV K+ Sbjct: 232 SYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKP 291
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+E Sbjct: 292 ETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 160 bits (404), Expect = 2e-39 Identities = 76/98 (77%), Positives = 86/98 (87%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T +L GKIT SV ++ Sbjct: 232 SYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKP 291
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E Sbjct: 292 ETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 159 bits (403), Expect = 3e-39 Identities = 75/98 (76%), Positives = 84/98 (85%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRG S GYDNAVA+PAGG GDEEEL KENNK + GKIT SV +T Sbjct: 231 SYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKP 290
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVFES+QPSDTDLG+KAPKDVKIQG+WYAQ+E Sbjct: 291 ETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 158 bits (399), Expect = 9e-39 Identities = 75/98 (76%), Positives = 86/98 (87%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T++ GKIT SV ++ Sbjct: 235 SYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKP 294
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E Sbjct: 295 ETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 154 bits (390), Expect = 1e-37 Identities = 72/98 (73%), Positives = 84/98 (85%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL+KEN K+T A G+IT + K+ Sbjct: 234 SYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKP 293
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+E Sbjct: 294 ETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 154 bits (388), Expect = 2e-37 Identities = 73/98 (74%), Positives = 83/98 (84%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KEN K+T A G+IT V K+ Sbjct: 235 SYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKP 294
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+E Sbjct: 295 ETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 153 bits (386), Expect = 3e-37 Identities = 71/98 (72%), Positives = 83/98 (84%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNAVA+PAGG GDEEEL KENNK+ + G IT SV + Sbjct: 233 SYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKP 292
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVF+S+QPSDTDLG+K PKDVKI+G+WYAQ+E Sbjct: 293 ETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 145 bits (366), Expect = 6e-35 Identities = 72/98 (73%), Positives = 82/98 (83%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRGSSFLDPKGRGGS GYDNA A+P GG GDEEELAKEN K+ ++ G IT SV K+ Sbjct: 228 SYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKP 287
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 294 ETGE+ GVFESVQPSDTDL +APKDVKIQG+WYAQ+E Sbjct: 288 ETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLE 323
>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2 Length = 338
Score = 142 bits (357), Expect = 7e-34 Identities = 66/97 (68%), Positives = 79/97 (81%) Frame = +1
Query: 1 AYRGSSFLDPKGRGGSQGYDNAVAIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNL 180 +YRG++FLDPKGRGG+ GYD AVA+PA +GD+EE AKEN+K T A G I F VAK N Sbjct: 240 SYRGATFLDPKGRGGASGYDTAVALPA--SGDDEEYAKENSKSTAASVGTIAFKVAKVNA 297
Query: 181 ETGEIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 291 ETGEI GVFES+QPSDTDLG+K PKD+K G+WYAQ+ Sbjct: 298 ETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1K9 |
Definition |
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
98 |
Score (bit) |
173.0 |
E-value |
4.0e-42 |
Report |
|