DK945140 |
Clone id |
YMU02A01NGRL0008_F23 |
Library |
YMU02 |
Length |
585 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_F23. 5' end sequence. |
Accession |
DK945140 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL932Contig1 |
Sequence |
CCTGCTCTTTTGAGAGCTCAGAGAGTTGCAGCGAGCGGGAAGAATGCCTTTCCGGCGCTA TGTGGAGATCGGACGAGTGGCCATGGTGAACTACGGCCCCAGCTATGGAAAGCTTGTTGT GATCGTCGATGTCGTTGATCAGAACAGGGCCCTTGTTGATGCCCCTGACATGGTCCGCGG TGCTATGAATTTCAAGAGGCTTTCGTTAACTGATCTCGTAGTCGAGATACCTAGGATGCC CAAGAAGAAGCAGCTAGCTGATGCCGTTGAAGCTGCAGATATTCACAACAAATGGGCTAA CAGCTCGTGGGGAAGGAAACTAATTGTGCAAAAGAAGCGTGCTTCTCTTAATGACTTTGA TCGATTCAAGGTTATGGTGGCCCGGATCAAGAGAGGCTCCATCATCAAAAGAGAATTGGC AAAATTAAGAAAGGAGAAAGCTTAGCTTGCTTTTGCACTATCTCAAAGCAAATACACTGG CTTTTTGGATAGTAGTTCTATATTGAACAACAGGCTGTAGTACAGCAGCAAAGTTTTTAA ATGTAAAATAGGAGAGCCATTTAAGCCAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9T043 |
Definition |
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana |
Align length |
121 |
Score (bit) |
184.0 |
E-value |
2.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945140|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_F23, 5' (567 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis... 184 2e-46 sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis... 184 3e-46 sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum s... 182 8e-46 sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus G... 126 9e-29 sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RP... 125 1e-28 sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=... 125 1e-28 sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicu... 124 2e-28 sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens G... 124 4e-28 sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rube... 114 3e-25 sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia ja... 109 1e-23 sp|O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharo... 104 3e-22 sp|P38754|RL14B_YEAST 60S ribosomal protein L14-B OS=Saccharomyc... 92 1e-18 sp|P36105|RL14A_YEAST 60S ribosomal protein L14-A OS=Saccharomyc... 92 2e-18 sp|P55841|RL14_DROME 60S ribosomal protein L14 OS=Drosophila mel... 89 2e-17 sp|Q95ZE8|RL14_DROVI 60S ribosomal protein L14 OS=Drosophila vir... 87 7e-17 sp|Q54Z09|RL14_DICDI 60S ribosomal protein L14 OS=Dictyostelium ... 84 5e-16 sp|P55843|RL14_TRYCO Probable 60S ribosomal protein L14 OS=Trypa... 62 2e-09 sp|Q25278|RL14_LEIDO Probable 60S ribosomal protein L14 OS=Leish... 62 3e-09 sp|P55842|RL14_TRYBB Probable 60S ribosomal protein L14 OS=Trypa... 61 3e-09 sp|A4WH36|RL14E_PYRAR 50S ribosomal protein L14e OS=Pyrobaculum ... 49 1e-05 sp|Q8ZYB4|RL14E_PYRAE 50S ribosomal protein L14e OS=Pyrobaculum ... 47 5e-05 sp|A1RTL6|RL14E_PYRIL 50S ribosomal protein L14e OS=Pyrobaculum ... 47 9e-05 sp|P54054|RL14E_METJA 50S ribosomal protein L14e OS=Methanocaldo... 47 9e-05 sp|Q8TX43|RL14E_METKA 50S ribosomal protein L14e OS=Methanopyrus... 46 1e-04 sp|Q4JAJ9|RL14E_SULAC 50S ribosomal protein L14e OS=Sulfolobus a... 45 2e-04 sp|Q8U2L5|RL14E_PYRFU 50S ribosomal protein L14e OS=Pyrococcus f... 45 3e-04 sp|A3MS76|RL14E_PYRCJ 50S ribosomal protein L14e OS=Pyrobaculum ... 45 3e-04 sp|Q9YDD7|RL14E_AERPE 50S ribosomal protein L14e OS=Aeropyrum pe... 44 6e-04 sp|A8ABY5|RL14E_IGNH4 50S ribosomal protein L14e OS=Ignicoccus h... 44 7e-04 sp|P59937|RL14E_PYRHO 50S ribosomal protein L14e OS=Pyrococcus h... 43 0.001
>sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1 Length = 134
Score = 184 bits (468), Expect = 2e-46 Identities = 88/121 (72%), Positives = 106/121 (87%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDLVV 223 M F+RYVEIGRVA+VNYG +GKLVVIVDVVDQNRALVDAPDM R MNFKRLSLTD+V+ Sbjct: 1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60
Query: 224 EIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSI 403 +I R+PKKK L +A+E AD+ NKW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IK+ + Sbjct: 61 DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120
Query: 404 I 406 + Sbjct: 121 V 121
>sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1 Length = 134
Score = 184 bits (466), Expect = 3e-46 Identities = 89/121 (73%), Positives = 105/121 (86%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDLVV 223 M F+R+VEIGRVA+VNYG YGKLVVIVDVVDQNRALVDAPDM R MN KRLSLTD+V+ Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60
Query: 224 EIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGSI 403 +I R+PKKK L +A+E AD+ NKW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IKR I Sbjct: 61 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120
Query: 404 I 406 + Sbjct: 121 V 121
>sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1 Length = 133
Score = 182 bits (463), Expect = 8e-46 Identities = 86/119 (72%), Positives = 104/119 (87%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDLVV 223 MPF+R+VEIGRVA++NYG YG+LVVIVDV+DQ RALVDAPDM R +NFKRLSLTDL + Sbjct: 1 MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60
Query: 224 EIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRGS 400 +I R+PKKK L A+EAAD+ NKWA SSWGRKLIV+K RA+LNDFDRFK+M+A+IKR + Sbjct: 61 DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAA 119
>sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3 Length = 217
Score = 126 bits (316), Expect = 9e-29 Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 2/123 (1%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDL 217 M FRRYVE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 218 VVEIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRG 397 +++ P ++K + A E ADI+ KWA + W +K+ ++++A + DFDRFKVM A+ R Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 398 SII 406 II Sbjct: 121 RII 123
>sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1 Length = 213
Score = 125 bits (314), Expect = 1e-28 Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 2/123 (1%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDL 217 M FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDF 60
Query: 218 VVEIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRG 397 +++ P ++K + A E ADI+ KWA + W +K+ ++K+A + DFDR+KVM AR R Sbjct: 61 ILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRN 120
Query: 398 SII 406 +I Sbjct: 121 RLI 123
>sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3 Length = 214
Score = 125 bits (314), Expect = 1e-28 Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 2/123 (1%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDL 217 M FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDF 60
Query: 218 VVEIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRG 397 +++ P ++K + A E ADI+ KWA + W +K+ ++K+A + DFDR+KVM AR R Sbjct: 61 ILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRN 120
Query: 398 SII 406 +I Sbjct: 121 RLI 123
>sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3 Length = 214
Score = 124 bits (312), Expect = 2e-28 Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 2/123 (1%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDL 217 M FRR+VE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 218 VVEIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRG 397 +++ P ++K + A E ADI+ KWA + W +K+ ++++A + DFDRFKVM A+ R Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 398 SII 406 II Sbjct: 121 RII 123
>sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 Length = 215
Score = 124 bits (310), Expect = 4e-28 Identities = 62/123 (50%), Positives = 85/123 (69%), Gaps = 2/123 (1%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDL 217 M FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDF 60
Query: 218 VVEIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRG 397 +++ P +K + A + ADI+ KWA + W +K+ ++++A + DFDRFKVM A+ R Sbjct: 61 ILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRN 120
Query: 398 SII 406 II Sbjct: 121 RII 123
>sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1 Length = 152
Score = 114 bits (285), Expect = 3e-25 Identities = 61/123 (49%), Positives = 78/123 (63%), Gaps = 2/123 (1%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDL 217 M FRR+VEIGRVA YGP GKLV IVDV+DQNRALVD P + R +MNFK L LT+L Sbjct: 1 MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60
Query: 218 VVEIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRG 397 + P K + A E +I KW S +K+ ++KR +L DF+RFK+M A+ R Sbjct: 61 KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120
Query: 398 SII 406 +I Sbjct: 121 RLI 123
>sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1 Length = 133
Score = 109 bits (272), Expect = 1e-23 Identities = 60/124 (48%), Positives = 83/124 (66%), Gaps = 3/124 (2%) Frame = +2
Query: 44 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPD--MVRGAMNFKRLSLTDL 217 M F R+VE GRVA+V+YG KLVVIVD++DQNR LVD+P + R +N KR++LT + Sbjct: 1 MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60
Query: 218 VV-EIPRMPKKKQLADAVEAADIHNKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKR 394 V +I R ++ AA + +A S WG+KL ++KRA+L+DF RFKVMVAR+K+ Sbjct: 61 KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120
Query: 395 GSII 406 I Sbjct: 121 SKAI 124
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRN0 |
Definition |
tr|B8LRN0|B8LRN0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
121 |
Score (bit) |
198.0 |
E-value |
1.0e-49 |
Report |
|