DK945168 |
Clone id |
YMU02A01NGRL0008_H05 |
Library |
YMU02 |
Length |
621 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_H05. 5' end sequence. |
Accession |
DK945168 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL30Contig1 |
Sequence |
GTTTGGGAGAAGATGGTCCAACCCATCAACCCATAGAGCATCTGGCAAGCTTCAGAGCCA TGCCCAATATTTTGATGTTGCGACCTGCTGATGGAAATGAGACTGCTGGTGCATACAAGG TGGCTGTGGAGAGTAGAAAACGGCCCTCAATTCCTGCGCTCTCGCGCCAAAAGCTCCCCC ATCTACCTGGGACATCTATTGAAGGAGTAGAGAAAGGAGGCTATACCATCAGTTGCAACG CTTCTGGAAACAAGCCTGACTTGATCCTCTTCGGAACAGGATCTGAACTAGAGATTGCCT ACAAAGCAGCCGAAGTCATCAGGAAGGAGGGCAAAACTGTGAGAGTTGTCTCAATGGTAT CATGGGAGTTGTTTGAAGAACAAAGTGCTGAATACAAAGAGAGTGTTATCCCTGCAGCCG TGACTTCCAGAGTGAGTGCCGAAGCTGGTTCTACATTCGGTTGGGAGAAGTATGTAGGCT CCAAAGGCAAAGCAATAGGCATTGACCACTTTGGTGCCAGTGCACCTGCTGGTACCATCT ACAAAAAGTTTGGTTTGACTGTGGACAATGTGGTTGCCAATGCCAAGGAGGTGATGTAAA TATACTTTTGTATTTACTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
195 |
Score (bit) |
330.0 |
E-value |
4.0e-90 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945168|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_H05, 5' (621 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 330 4e-90 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 325 2e-88 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 311 1e-84 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 307 2e-83 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 294 3e-79 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 291 2e-78 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 238 1e-62 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 205 1e-52 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 199 7e-51 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 199 7e-51 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 199 7e-51 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 199 7e-51 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 199 7e-51 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 199 7e-51 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 197 5e-50 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 196 8e-50 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 195 1e-49 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 190 4e-48 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 188 2e-47 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 187 4e-47 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 187 4e-47 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 187 5e-47 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 187 5e-47 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 186 6e-47 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 186 6e-47 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 186 6e-47 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 186 1e-46 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 186 1e-46 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 186 1e-46 sp|Q87LK8|TKT1_VIBPA Transketolase 1 OS=Vibrio parahaemolyticus ... 184 3e-46
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 330 bits (846), Expect = 4e-90 Identities = 162/195 (83%), Positives = 182/195 (93%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 LGEDGPTHQPIEHL SFRAMPNILMLRPADGNETAGAYKVAV +RKRPSI ALSRQKLPH Sbjct: 479 LGEDGPTHQPIEHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPH 538
Query: 183 LPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVS 362 LPGTSIEGVEKGGYTIS N++GNKPDLI+ GTGSELEIA KAA+ +RKEGKTVRVVS VS Sbjct: 539 LPGTSIEGVEKGGYTISDNSTGNKPDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVS 598
Query: 363 WELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIY 542 WELF+EQS EYKESV+PAAVT+R+S EAGST GW+KYVG++GKAIGID FGASAPAGTIY Sbjct: 599 WELFDEQSDEYKESVLPAAVTARISIEAGSTLGWQKYVGAQGKAIGIDKFGASAPAGTIY 658
Query: 543 KKFGLTVDNVVANAK 587 K++G+TV++++A AK Sbjct: 659 KEYGITVESIIAAAK 673
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 325 bits (832), Expect = 2e-88 Identities = 163/198 (82%), Positives = 180/198 (90%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAV++ KRPS+ ALSRQKLP Sbjct: 322 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVQNLKRPSVLALSRQKLPQ 381
Query: 183 LPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVS 362 LPGTSIEGVEKGGY IS N+SGNKPD+IL GTGSELEIA KA EV+RKEGK VRVVS VS Sbjct: 382 LPGTSIEGVEKGGYVISDNSSGNKPDVILIGTGSELEIAAKAGEVLRKEGKGVRVVSFVS 441
Query: 363 WELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIY 542 WELF+EQS EYKESV+P++VT+RVS EAGSTFGW K VGSKGKAIGID FGASAPAG IY Sbjct: 442 WELFDEQSKEYKESVLPSSVTARVSIEAGSTFGWGKIVGSKGKAIGIDRFGASAPAGKIY 501
Query: 543 KKFGLTVDNVVANAKEVM 596 ++FG+TV+ VVA AKE++ Sbjct: 502 EEFGITVEAVVAAAKELI 519
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 311 bits (798), Expect = 1e-84 Identities = 156/197 (79%), Positives = 173/197 (87%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 LGEDGPTHQPIEHLASFRAMPNILM RPADGNETAGAYKVAV RK PSI ALSRQKLP Sbjct: 544 LGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVLKRKTPSILALSRQKLPQ 603
Query: 183 LPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVS 362 L GTSIEG KGGY +S N+SGNKPD+IL GTGSELEIA KAAE ++KEGKTVRVVS V Sbjct: 604 LAGTSIEGAAKGGYIVSDNSSGNKPDVILIGTGSELEIAVKAAEELKKEGKTVRVVSFVC 663
Query: 363 WELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIY 542 WEL++EQSAEYKESV+P++VT+RVS EAGSTFGW+K+VG KGKAIGID FGASAPA IY Sbjct: 664 WELYDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKGKAIGIDGFGASAPADKIY 723
Query: 543 KKFGLTVDNVVANAKEV 593 K+FG+T + VVA AK+V Sbjct: 724 KEFGITAEAVVAAAKQV 740
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 307 bits (787), Expect = 2e-83 Identities = 155/197 (78%), Positives = 174/197 (88%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 LGEDGPTHQPIE L+ F AMPNILMLRPADGNETAG+YKVAVE+RK PSI ALSR+KLP+ Sbjct: 544 LGEDGPTHQPIEALSKFPAMPNILMLRPADGNETAGSYKVAVENRKTPSILALSRKKLPN 603
Query: 183 LPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVS 362 LPGTSIEGVEKGGYTI+ N+SGNKPD+IL GTGSELEIA KA + +RKEGK VRVVS VS Sbjct: 604 LPGTSIEGVEKGGYTITDNSSGNKPDVILIGTGSELEIAAKAGDELRKEGKAVRVVSFVS 663
Query: 363 WELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTIY 542 WELFE+QS EYKESV+P+ VT+RVS EAGSTFGW K VGSKGKAIGID FGASAPAG IY Sbjct: 664 WELFEKQSDEYKESVLPSDVTARVSIEAGSTFGWHKIVGSKGKAIGIDKFGASAPAGKIY 723
Query: 543 KKFGLTVDNVVANAKEV 593 +++G+TV+ VV AK V Sbjct: 724 QEYGITVEAVVEAAKSV 740
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 294 bits (752), Expect = 3e-79 Identities = 147/198 (74%), Positives = 171/198 (86%), Gaps = 1/198 (0%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 LGEDGPTHQP+EHLASFRAMPNIL+LRPADGNETAGAYKVAVE+ RPSI +LSRQKLP Sbjct: 481 LGEDGPTHQPVEHLASFRAMPNILVLRPADGNETAGAYKVAVENAGRPSILSLSRQKLPQ 540
Query: 183 LPGTSIEGVEKGGYTISCNAS-GNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMV 359 LPGTS+EGV +GGY IS N+ G KP++IL GTGSELEIA +A E +RKEGK VRVVS+V Sbjct: 541 LPGTSVEGVGRGGYVISDNSKDGEKPEVILMGTGSELEIAARAGEELRKEGKKVRVVSLV 600
Query: 360 SWELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTI 539 SWELF EQS EYKE V+P+ VT+RVS EAGSTFGWE++VG KG+A+GID FGASA A + Sbjct: 601 SWELFGEQSKEYKEMVLPSEVTARVSVEAGSTFGWERFVGLKGRAVGIDRFGASASAERL 660
Query: 540 YKKFGLTVDNVVANAKEV 593 YK+FG+TV+ VVA AKE+ Sbjct: 661 YKEFGITVEAVVAAAKEL 678
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 291 bits (745), Expect = 2e-78 Identities = 142/199 (71%), Positives = 171/199 (85%), Gaps = 2/199 (1%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 LGEDGPTHQP+EHLASFRAMPNIL LRPADGNETAGAY+ AV++ +RPSI L+RQKLP Sbjct: 477 LGEDGPTHQPVEHLASFRAMPNILTLRPADGNETAGAYRAAVQNGERPSILVLARQKLPQ 536
Query: 183 LPGTSIEGVEKGGYTISCNASG--NKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSM 356 LPGTSIEGV KGGY IS N+ G +KPD+IL GTGSELEIA +A + +RKEGK VRVVS+ Sbjct: 537 LPGTSIEGVSKGGYVISDNSRGGNSKPDVILIGTGSELEIAARAGDELRKEGKKVRVVSL 596
Query: 357 VSWELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGT 536 V WELF EQS +Y+E+V+P+ VT+RVS EAGSTFGWE+++G KGKA+GID FGASAPA Sbjct: 597 VCWELFAEQSEKYRETVLPSGVTARVSVEAGSTFGWERFIGPKGKAVGIDRFGASAPAER 656
Query: 537 IYKKFGLTVDNVVANAKEV 593 ++K+FG+TV+ VVA AKE+ Sbjct: 657 LFKEFGITVEAVVAAAKEI 675
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 238 bits (608), Expect = 1e-62 Identities = 117/199 (58%), Positives = 151/199 (75%), Gaps = 2/199 (1%) Frame = +3
Query: 6 GEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKR--PSIPALSRQKLP 179 GEDGPTHQPIE LAS RA+PN+ ++RPADGNET+GAYKVA+E K P++ A +RQ +P Sbjct: 473 GEDGPTHQPIETLASLRAIPNLTVIRPADGNETSGAYKVAIERAKNNAPTLLAFTRQNVP 532
Query: 180 HLPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMV 359 +L GTSI+ V KGGY + + PDLIL GTGSEL + AAE ++ EGK VRVVS+ Sbjct: 533 NLAGTSIDDVAKGGYIVV--DTDGTPDLILIGTGSELSLCVTAAEKLKAEGKKVRVVSLA 590
Query: 360 SWELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAGTI 539 +W+LF+ Q A YKESV+P AVT R++ EA S+FGW KY+GS+G A+ ID FGASAP G Sbjct: 591 AWDLFDAQDAAYKESVLPKAVTKRLAVEAASSFGWHKYIGSEGDAVTIDRFGASAPGGVC 650
Query: 540 YKKFGLTVDNVVANAKEVM 596 +KFG +VDNV+A AK+++ Sbjct: 651 LEKFGFSVDNVLAKAKQLL 669
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 205 bits (522), Expect = 1e-52 Identities = 102/201 (50%), Positives = 140/201 (69%), Gaps = 3/201 (1%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 +GEDGPTH+P+E LAS RAMP + ++RPADGNE+ A+K+A+ES+ +P+ LSRQ LP Sbjct: 465 VGEDGPTHEPVEQLASLRAMPGLSVIRPADGNESVAAWKLALESKDQPTALVLSRQNLPT 524
Query: 183 LPGT---SIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVS 353 L G + +GV KG Y ++ + DL+L +GSE+ +A A E + KEG VVS Sbjct: 525 LEGAVDRAYDGVSKGAYVLA--PANGSADLLLLASGSEVSLAVNAKEALEKEGIHAAVVS 582
Query: 354 MVSWELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAG 533 M SW+ FE QSAEYKE V+P+ VT+R++ E GS+ GW KYVG++G + ID FGASAP Sbjct: 583 MPSWDRFEAQSAEYKEEVLPSDVTARLAIEMGSSLGWAKYVGNQGDVVAIDRFGASAPGE 642
Query: 534 TIYKKFGLTVDNVVANAKEVM 596 I ++FG TV +VVA AK ++ Sbjct: 643 RIMEEFGFTVQHVVARAKALL 663
>sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (strain MW2) GN=tkt PE=3 SV=1 Length = 662
Score = 199 bits (507), Expect = 7e-51 Identities = 102/194 (52%), Positives = 137/194 (70%), Gaps = 3/194 (1%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 +GEDGPTH+PIE LA RA+PN+ ++RPADGNET A++VA+ES P+ L+RQ LP Sbjct: 465 VGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESESTPTSLVLTRQNLPV 524
Query: 183 L--PGTSIE-GVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVS 353 L P +E GV KG YT+ S P+ +L +GSE+ +A +AA+ + K+GK+VRVVS Sbjct: 525 LDVPEDVVEEGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVS 582
Query: 354 MVSWELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAG 533 M +W FE+QS EYKESVIP++VT RV+ E S GW KYVG+ GK I ID FGASAP Sbjct: 583 MPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGD 642
Query: 534 TIYKKFGLTVDNVV 575 + +K+G T +N++ Sbjct: 643 LVVEKYGFTKENIL 656
>sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (strain MSSA476) GN=tkt PE=3 SV=1 Length = 662
Score = 199 bits (507), Expect = 7e-51 Identities = 102/194 (52%), Positives = 137/194 (70%), Gaps = 3/194 (1%) Frame = +3
Query: 3 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSIPALSRQKLPH 182 +GEDGPTH+PIE LA RA+PN+ ++RPADGNET A++VA+ES P+ L+RQ LP Sbjct: 465 VGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESESTPTSLVLTRQNLPV 524
Query: 183 L--PGTSIE-GVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVS 353 L P +E GV KG YT+ S P+ +L +GSE+ +A +AA+ + K+GK+VRVVS Sbjct: 525 LDVPEDVVEEGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVS 582
Query: 354 MVSWELFEEQSAEYKESVIPAAVTSRVSAEAGSTFGWEKYVGSKGKAIGIDHFGASAPAG 533 M +W FE+QS EYKESVIP++VT RV+ E S GW KYVG+ GK I ID FGASAP Sbjct: 583 MPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGD 642
Query: 534 TIYKKFGLTVDNVV 575 + +K+G T +N++ Sbjct: 643 LVVEKYGFTKENIL 656
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNE5 |
Definition |
tr|A9NNE5|A9NNE5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
198 |
Score (bit) |
330.0 |
E-value |
5.0e-89 |
Report |
|