NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945175
Clone id YMU02A01NGRL0008_H16
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_H16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CAGATAGAGAGAAGGGGGGAAGAGAGAGAGAGAGAGAGACAGAGAGAGAGTCGACTGGAA
GGCTTTTGGCTTTTCAACAACAGTTGATTGAGACTTGTGCTCCTGGGGTTGTGCCCTGCC
TGCAGCTTCAGAAGAGACCCTAGAGCATGTCGTCTGCTAAGCCAGGCGGGAATGGGAGTA
AAGACGGTGTGGTGGCAAAGACGGCAGGTGTTGCCGTTCTCTGCGGCGTTGCATGGAGTG
TCTACAAGACGGTGAAGCCGCTTCTCTGCAAACCCAAGTACACCACCTACCACATCGAGA
GAGGGGACACTCTCTACTCCATTGCACACCGTAATGGGGTTTCAGTGCACGATTTGAAAG
TTGCGAATGGATATGATGATGATGATATTTATGCGGGTGATGTCATGAGCATACCCAAAT
AAGGCTTTGAATGTATATATCTCTCCCTGCTTGGTTTGCGTGCCTAGGTGCATCGGGCCG
TTTGTGTCAGCAACACCTGATTGCAACATTTGTGGTGGTTGGGTGATTAGCATGCATAGT
TGTAAACATTTCCCAGCTTTGTATTCATTTGAGATAAGACTACT
■■Homology search results ■■ -
sp_hit_id O34669
Definition sp|O34669|YOCH_BACSU Uncharacterized protein yocH OS=Bacillus subtilis
Align length 42
Score (bit) 41.6
E-value 0.003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945175|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_H16, 5'
         (584 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O34669|YOCH_BACSU Uncharacterized protein yocH OS=Bacillus su...    42   0.003
sp|O31681|YKVP_BACSU Spore protein ykvP OS=Bacillus subtilis GN=...    41   0.004
sp|Q01838|P60_LISSE Protein p60 OS=Listeria seeligeri GN=iap PE=...    40   0.007
sp|O31852|CWLS_BACSU D-gamma-glutamyl-meso-diaminopimelic acid e...    40   0.007
sp|Q88893|POL1_TRSVB RNA1 polyprotein OS=Tobacco ringspot virus ...    38   0.032
sp|O07532|LYTF_BACSU Endopeptidase lytF OS=Bacillus subtilis GN=...    38   0.032
sp|P37710|ALYS_ENTFA Autolysin OS=Enterococcus faecalis GN=EF_07...    38   0.032
sp|Q01835|P60_LISGR Protein p60 OS=Listeria grayi GN=iap PE=3 SV=1     38   0.042
sp|Q01836|P60_LISIN Protein p60 OS=Listeria innocua GN=iap PE=3 ...    37   0.055
sp|P54421|LYTE_BACSU Probable endopeptidase lytE OS=Bacillus sub...    37   0.055
sp|A2RHZ5|ACMA_LACLM Probable N-acetylmuramidase OS=Lactococcus ...    37   0.055
sp|P0C2T5|ACMA_LACLC Probable N-acetylmuramidase OS=Lactococcus ...    37   0.055
sp|O05495|YDHD_BACSU Putative sporulation-specific glycosylase y...    37   0.094
sp|Q49UX4|SLE1_STAS1 N-acetylmuramoyl-L-alanine amidase sle1 OS=...    37   0.094
sp|Q4L3C1|SLE1_STAHJ N-acetylmuramoyl-L-alanine amidase sle1 OS=...    37   0.094
sp|Q8CMN2|SLE1_STAES N-acetylmuramoyl-L-alanine amidase sle1 OS=...    37   0.094
sp|Q5HRU2|SLE1_STAEQ N-acetylmuramoyl-L-alanine amidase sle1 OS=...    37   0.094
sp|P21171|P60_LISMO Protein p60 OS=Listeria monocytogenes GN=iap...    36   0.12 
sp|Q9CIT4|ACMA_LACLA Probable N-acetylmuramidase OS=Lactococcus ...    36   0.12 
sp|Q01837|P60_LISIV Protein p60 OS=Listeria ivanovii GN=iap PE=3...    36   0.16 
sp|Q93ZH0|LYM1_ARATH LysM domain-containing GPI-anchored protein...    36   0.16 
sp|O34391|XLYB_BACSU N-acetylmuramoyl-L-alanine amidase xlyB OS=...    35   0.36 
sp|Q01839|P60_LISWE Protein p60 OS=Listeria welshimeri GN=iap PE...    35   0.36 
sp|Q6NPN4|LYM3_ARATH LysM domain-containing GPI-anchored protein...    34   0.61 
sp|P0AEZ7|MLTD_ECOLI Membrane-bound lytic murein transglycosylas...    33   0.80 
sp|P0AEZ8|MLTD_ECOL6 Membrane-bound lytic murein transglycosylas...    33   0.80 
sp|Q46798|YGER_ECOLI Uncharacterized lipoprotein ygeR OS=Escheri...    32   1.8  
sp|P39046|MUR2_ENTHR Muramidase-2 OS=Enterococcus hirae PE=1 SV=1      32   1.8  
sp|Q66HY7|IF4E3_DANRE Eukaryotic translation initiation factor 4...    32   1.8  
sp|Q9CH26|TAGH_LACLA Teichoic acids export ATP-binding protein t...    32   2.3  

>sp|O34669|YOCH_BACSU Uncharacterized protein yocH OS=Bacillus
           subtilis GN=yocH PE=2 SV=1
          Length = 287

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +3

Query: 288 YHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           Y I+ GDTL  IA + G +V++LKV N    D IYAG  +S+
Sbjct: 80  YTIKAGDTLSKIAQKFGTTVNNLKVWNNLSSDMIYAGSTLSV 121



 Score = 40.0 bits (92), Expect = 0.009
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = +3

Query: 210 VAVLCGVAWSVYKTVKPLLCKPKYTTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDI 389
           VA L   A+  + + K +          +++GDTL+ I+ +NGV++ DLK  N    D I
Sbjct: 11  VAALSTTAFGAHASAKEIT---------VQKGDTLWGISQKNGVNLKDLKEWNKLTSDKI 61

Query: 390 YAGDVMSI 413
            AG+ ++I
Sbjct: 62  IAGEKLTI 69


>sp|O31681|YKVP_BACSU Spore protein ykvP OS=Bacillus subtilis
           GN=ykvP PE=2 SV=1
          Length = 399

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +3

Query: 270 KPKYTTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           K KY  +H+  G+TL  IA +  VS+  L   N +  D IYAG ++ I
Sbjct: 339 KEKYVIHHVTPGETLSIIASKYNVSLQQLMELNHFKSDQIYAGQIIKI 386


>sp|Q01838|P60_LISSE Protein p60 OS=Listeria seeligeri GN=iap PE=3
           SV=1
          Length = 523

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 26/78 (33%), Positives = 36/78 (46%)
 Frame = +3

Query: 180 KDGVVAKTAGVAVLCGVAWSVYKTVKPLLCKPKYTTYHIERGDTLYSIAHRNGVSVHDLK 359
           K   +A TAG+AV    A ++             +T  +E GDTL+ IA  NG +V  LK
Sbjct: 4   KKATIAATAGIAVTAFAAPTIASA----------STVVVEAGDTLWGIAQDNGTTVDALK 53

Query: 360 VANGYDDDDIYAGDVMSI 413
            AN    D I  G  + +
Sbjct: 54  KANKLTTDKIVPGQKLQV 71



 Score = 37.4 bits (85), Expect = 0.055
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           ++Y ++ GDTL  IA   G +V  +K  NG   D++  GDV+ +
Sbjct: 318 SSYTVKSGDTLGKIASTFGTTVSKIKALNGLTSDNLQVGDVLKV 361



 Score = 36.6 bits (83), Expect = 0.094
 Identities = 23/89 (25%), Positives = 36/89 (40%)
 Frame = +3

Query: 147 MSSAKPGGNGSKDGVVAKTAGVAVLCGVAWSVYKTVKPLLCKPKYTTYHIERGDTLYSIA 326
           +  A P     KD V  KT   AV                     TT+ ++ GDT+++++
Sbjct: 170 VKQATPAATTEKDAVETKTTAPAV-----------------DTNATTHTVKSGDTIWALS 212

Query: 327 HRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
            + G SV DL   N      IY G  +++
Sbjct: 213 VKYGASVQDLMSWNNLSSSSIYVGQNIAV 241


>sp|O31852|CWLS_BACSU D-gamma-glutamyl-meso-diaminopimelic acid
           endopeptidase cwlS OS=Bacillus subtilis GN=cwlS PE=1
           SV=1
          Length = 414

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +3

Query: 255 KPLLCKP-KYTTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           KP    P K TTY ++ GD+L+ IA+R GV+V  ++  N    D +  G V++I
Sbjct: 215 KPSNSNPSKTTTYKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTI 268



 Score = 36.2 bits (82), Expect = 0.12
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           +TY ++ GD+L+ IA+   ++V +LK  NG   D +Y   V+ I
Sbjct: 157 STYTVKLGDSLWKIANSLNMTVAELKTLNGLTSDTLYPKQVLKI 200



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 276 KYTTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           K +TY +  GD+L+ IA  + +SV +LK  N    D I  G  + I
Sbjct: 86  KTSTYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131


>sp|Q88893|POL1_TRSVB RNA1 polyprotein OS=Tobacco ringspot virus
           (strain Bud Blight) PE=3 SV=1
          Length = 2304

 Score = 38.1 bits (87), Expect = 0.032
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
 Frame = -3

Query: 366 SQLSNRALKPHYGVQWSRECPLSRCGRWCTWVCREAASPSCRHSMQRRRERQH------L 205
           S+ SNRAL+   G+ +S  CP + CG       +E  +   RHS +R R   H      L
Sbjct: 15  SEWSNRALREE-GLSFSMRCPGACCGAMLVRKQQEPEAVDQRHSPERVRIAPHQNVCAGL 73

Query: 204 PSLPPHRLYSHSRLA*QTTCSRVSSEAAGRAQPQEHKSQSTVV 76
           P + P +   HS++        V + A   A P + +    VV
Sbjct: 74  PGVGPSKCPKHSQVPLAPKSKSVPARATVSASPLKKQHCDVVV 116


>sp|O07532|LYTF_BACSU Endopeptidase lytF OS=Bacillus subtilis
           GN=lytF PE=1 SV=1
          Length = 488

 Score = 38.1 bits (87), Expect = 0.032
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 285 TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVM 407
           TY ++ GD+L+ IA++  +S+ +LKV N    D IY   V+
Sbjct: 175 TYKVQLGDSLWKIANKVNMSIAELKVLNNLKSDTIYVNQVL 215



 Score = 33.1 bits (74), Expect = 1.0
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           T Y ++ GD+L+ IA+   ++V  ++  N    D +Y G V+ +
Sbjct: 240 TKYTVKSGDSLWKIANNYNLTVQQIRNINNLKSDVLYVGQVLKL 283


>sp|P37710|ALYS_ENTFA Autolysin OS=Enterococcus faecalis GN=EF_0799
           PE=3 SV=2
          Length = 737

 Score = 38.1 bits (87), Expect = 0.032
 Identities = 21/46 (45%), Positives = 28/46 (60%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           T Y I+ GDTL  IA + GVSV +L+  NG   D I+AG  + + K
Sbjct: 497 TYYTIKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVKK 542



 Score = 38.1 bits (87), Expect = 0.032
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           T+Y I+ GDTL  I+ + GVSV +L+  NG   D I+AG  + + K
Sbjct: 631 TSYTIKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIVKK 676



 Score = 36.6 bits (83), Expect = 0.094
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           T Y ++ GDTL  IA + GVSV +L+  NG   D I+ G  + + K
Sbjct: 361 TYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVKK 406



 Score = 36.6 bits (83), Expect = 0.094
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           T Y ++ GDTL  IA + GVSV +L+  NG   D I+ G  + + K
Sbjct: 429 TYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVKK 474



 Score = 34.3 bits (77), Expect = 0.47
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 294 IERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           ++ GD+L+ ++ + G+S+  +K  NG   D IY G  + +
Sbjct: 697 VKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIYIGQTLKV 736



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           T Y I+ GDTL  I+ + GVSV +L+  N      I+AG  + + K
Sbjct: 565 TYYTIKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVKK 610


>sp|Q01835|P60_LISGR Protein p60 OS=Listeria grayi GN=iap PE=3 SV=1
          Length = 511

 Score = 37.7 bits (86), Expect = 0.042
 Identities = 25/78 (32%), Positives = 33/78 (42%)
 Frame = +3

Query: 180 KDGVVAKTAGVAVLCGVAWSVYKTVKPLLCKPKYTTYHIERGDTLYSIAHRNGVSVHDLK 359
           K   +   AG+AV    A SV              T  +  GDTL+ IA + G +V  LK
Sbjct: 4   KKATIVSAAGIAVTAFAAPSVVSA----------NTVVVASGDTLWGIASKTGTTVDQLK 53

Query: 360 VANGYDDDDIYAGDVMSI 413
             N  D D I  G  ++I
Sbjct: 54  QLNKLDSDRIVPGQKLTI 71



 Score = 33.1 bits (74), Expect = 1.0
 Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
 Frame = +3

Query: 114 PCLQLQKRP*SMSSAKPGGNGSKDGVVAKTAGVAVLCGVAWSVYKTVKPLLCKPKYTTYH 293
           P  Q Q +P +  + KP  +  K    A TA  AV    +     T           TY 
Sbjct: 249 PAKQEQAKPAAKETVKPAVSKPKAATPAPTAKPAVEQKASTPAVDT--------NAATYK 300

Query: 294 IERGDTLYSIAHRNGVSVHDLKVANGYDDD-DIYAGDVMSI 413
           ++ GD+L  IA    VSV DL   N  +    IYAG  +S+
Sbjct: 301 VQNGDSLGKIASLFKVSVADLTNWNNLNATITIYAGQELSV 341



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           +TY ++ GDT+++++ + GV V  L   N      IY G  +++
Sbjct: 175 STYKVKSGDTIWALSVKYGVPVQKLIEWNNLSSSSIYVGQTIAV 218


>sp|Q01836|P60_LISIN Protein p60 OS=Listeria innocua GN=iap PE=3
           SV=2
          Length = 467

 Score = 37.4 bits (85), Expect = 0.055
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           TT++++ GDT+++++ + GVSV D+   N      IY G  ++I
Sbjct: 199 TTHNVKSGDTIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242


>sp|P54421|LYTE_BACSU Probable endopeptidase lytE OS=Bacillus
           subtilis GN=lytE PE=1 SV=1
          Length = 334

 Score = 37.4 bits (85), Expect = 0.055
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           +TY ++ GD+L  IA + G +V  LK  NG   D IY   V+ +
Sbjct: 149 STYKVKSGDSLSKIASKYGTTVSKLKSLNGLKSDVIYVNQVLKV 192



 Score = 37.0 bits (84), Expect = 0.072
 Identities = 14/44 (31%), Positives = 29/44 (65%)
 Frame = +3

Query: 282 TTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           +TY ++ GD+L+ I+ + G+++++LK  NG   D +  G V+ +
Sbjct: 86  STYKVKSGDSLWKISKKYGMTINELKKLNGLKSDLLRVGQVLKL 129



 Score = 30.8 bits (68), Expect = 5.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 294 IERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSI 413
           +++GDTL+ ++ +   ++  +K  N    D IY G  +SI
Sbjct: 30  VKKGDTLWDLSRKYDTTISKIKSENHLRSDIIYVGQTLSI 69
tr_hit_id A9NQL2
Definition tr|A9NQL2|A9NQL2_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 152
Score (bit) 54.3
E-value 5.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945175|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_H16, 5'
         (584 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NQL2|A9NQL2_PICSI Putative uncharacterized protein OS=Picea...    54   5e-06
tr|A1US83|A1US83_BARBK LysM/M23 peptidase domain protein OS=Bart...    51   5e-05
tr|Q9KJW8|Q9KJW8_BARBA 43 kDa antigen OS=Bartonella bacilliformi...    51   5e-05
tr|A9NYY7|A9NYY7_PICSI Putative uncharacterized protein OS=Picea...    51   5e-05
tr|A9NK98|A9NK98_PICSI Putative uncharacterized protein OS=Picea...    51   5e-05
tr|Q8RB08|Q8RB08_THETN LysM-repeat proteins and domains OS=Therm...    50   1e-04
tr|B0K0J3|B0K0J3_THEPX Cell wall hydrolase, SleB OS=Thermoanaero...    49   2e-04
tr|B2UQB9|B2UQB9_AKKM8 Peptidoglycan-binding LysM OS=Akkermansia...    49   2e-04
tr|Q8RNB5|Q8RNB5_BARHE NlpD (Antigen) (Virulence determinant) (L...    47   6e-04
tr|Q6WG12|Q6WG12_BARHE NlpD (Fragment) OS=Bartonella henselae GN...    47   6e-04
tr|Q1YIQ0|Q1YIQ0_MOBAS Putative peptidoglycan-binding peptidase,...    47   6e-04
tr|A7DVT0|A7DVT0_BARHE NlpD protein (Fragment) OS=Bartonella hen...    47   6e-04
tr|B2V5V6|B2V5V6_SULSY Peptidase M23 OS=Sulfurihydrogenibium sp....    47   8e-04
tr|B0K930|B0K930_THEP3 Cell wall hydrolase, SleB OS=Thermoanaero...    47   8e-04
tr|A5KPV8|A5KPV8_9FIRM Putative uncharacterized protein OS=Rumin...    47   8e-04
tr|A9TQC5|A9TQC5_PHYPA Predicted protein OS=Physcomitrella paten...    47   8e-04
tr|Q2RGP3|Q2RGP3_MOOTA NLP/P60 OS=Moorella thermoacetica (strain...    46   0.001
tr|A9IS26|A9IS26_BART1 Putative virulence determinant OS=Bartone...    46   0.001
tr|B7B574|B7B574_9PORP Putative uncharacterized protein OS=Parab...    46   0.001
tr|A8UCR7|A8UCR7_9LACT Autolysin OS=Carnobacterium sp. AT7 GN=CA...    46   0.001
tr|Q8ETN8|Q8ETN8_OCEIH N-acetylmuramoyl-L-alanine amidase (Autol...    46   0.002
tr|Q2SBB8|Q2SBB8_HAHCH N-acetylmuramoyl-L-alanine amidase OS=Hah...    46   0.002
tr|Q11HD1|Q11HD1_MESSB Peptidase M23B OS=Mesorhizobium sp. (stra...    46   0.002
tr|B2QC20|B2QC20_9BACL 3D domain protein OS=Exiguobacterium sp. ...    46   0.002
tr|Q1IYK1|Q1IYK1_DEIGD NLP/P60 OS=Deinococcus geothermalis (stra...    45   0.003
tr|A6CME6|A6CME6_9BACI Peptidoglycan hydrolase OS=Bacillus sp. S...    45   0.003
tr|Q5L0A8|Q5L0A8_GEOKA Hypothetical conserved protein OS=Geobaci...    45   0.004
tr|B1IJV0|B1IJV0_CLOBK Putative cell wall hydrolase OS=Clostridi...    45   0.004
tr|Q2B663|Q2B663_9BACI Putative uncharacterized protein OS=Bacil...    45   0.004
tr|B8CX65|B8CX65_9FIRM Peptidoglycan-binding LysM OS=Halothermot...    45   0.004

>tr|A9NQL2|A9NQL2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 150

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 47/152 (30%), Positives = 61/152 (40%), Gaps = 62/152 (40%)
 Frame = +3

Query: 147 MSSAKP-----GGNGS-KDGVVAKTAGVAVLCGVAWSVYKT---------VKPLLCKPKY 281
           MS AKP     GGNG  KD  +A TAGV V  G+  S++K          V PL  +P Y
Sbjct: 1   MSGAKPNKKGGGGNGKGKDTFIATTAGVVVFTGIGLSLFKAFKSKRLAEEVSPL--QPSY 58

Query: 282 T-----------------------------------------------TYHIERGDTLYS 320
                                                           T  I +GD+L+S
Sbjct: 59  EAVGDVRDQPQTEATEKNNDVVKEVNDVVKEVNIFGFHKGGNKKRSSQTIEIFKGDSLWS 118

Query: 321 IAHRNGVSVHDLKVANGYDDDDIYAGDVMSIP 416
           ++ + GVSV  +K AN Y DD IYAG+ + IP
Sbjct: 119 LSRKYGVSVDQIKAANKYTDDTIYAGEKLIIP 150


>tr|A1US83|A1US83_BARBK LysM/M23 peptidase domain protein
           OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
           GN=BARBAKC583_0521 PE=4 SV=1
          Length = 397

 Score = 50.8 bits (120), Expect = 5e-05
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +3

Query: 285 TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIP 416
           +Y ++ GDTL+SIA + G+SV  LKVANG  D+ IY G  + IP
Sbjct: 138 SYIVQSGDTLFSIAQQKGISVESLKVANGMGDNAIYIGQKLVIP 181


>tr|Q9KJW8|Q9KJW8_BARBA 43 kDa antigen OS=Bartonella bacilliformis
           GN=ORF-401 PE=4 SV=1
          Length = 401

 Score = 50.8 bits (120), Expect = 5e-05
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +3

Query: 285 TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIP 416
           +Y ++ GDTL+SIA + G+SV  LKVANG  D+ IY G  + IP
Sbjct: 142 SYIVQSGDTLFSIAQQKGISVESLKVANGMGDNAIYIGQKLVIP 185


>tr|A9NYY7|A9NYY7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 152

 Score = 50.8 bits (120), Expect = 5e-05
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +3

Query: 225 GVAWSVYKTVKPLLCKPKYT-TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGD 401
           GVA+ V K  +    K K   T  I +GDTL+ ++ + GVSV  +K ANG+ DD IYAG+
Sbjct: 88  GVAYDVGKKFQKGGGKKKSNQTIEIFKGDTLWGLSRKYGVSVEAIKAANGFSDDTIYAGE 147

Query: 402 VMSIP 416
            + +P
Sbjct: 148 KLILP 152



 Score = 34.7 bits (78), Expect = 4.0
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 153 SAKPGG--NGSKDGVVAKTAGVAVLCGVAWSVYKTVKP 260
           S K GG  +G KD VVA +AG  V  G+A S++K + P
Sbjct: 8   SGKSGGKDDGKKDAVVATSAGFVVFTGIALSLFKALWP 45


>tr|A9NK98|A9NK98_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 148

 Score = 50.8 bits (120), Expect = 5e-05
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +3

Query: 225 GVAWSVYKTVKPLLCKPKYT-TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGD 401
           GVA+ V K  +    K K   T  I +GDTL+ ++ + GVSV  +K ANG+ DD IYAG+
Sbjct: 84  GVAYDVGKKFQKGGGKKKSNQTIEIFKGDTLWGLSRKYGVSVEAIKAANGFSDDTIYAGE 143

Query: 402 VMSIP 416
            + +P
Sbjct: 144 KLILP 148



 Score = 34.7 bits (78), Expect = 4.0
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 153 SAKPGG--NGSKDGVVAKTAGVAVLCGVAWSVYKTVKP 260
           S K GG  +G KD VVA +AG  V  G+A S++K + P
Sbjct: 8   SGKSGGKDDGKKDAVVATSAGFVVFTGIALSLFKALWP 45


>tr|Q8RB08|Q8RB08_THETN LysM-repeat proteins and domains
           OS=Thermoanaerobacter tengcongensis GN=LytE PE=4 SV=1
          Length = 268

 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = +3

Query: 285 TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           TY +++GD+LY IA + G++V  LK AN Y  D IY G V  IPK
Sbjct: 77  TYVVQKGDSLYLIAKKYGITVDALKAANDYKSDIIYPGQVFIIPK 121



 Score = 38.5 bits (88), Expect = 0.28
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 285 TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIP 416
           TY ++ GDTL+ I+ + G++   L   NG     IY G V+ +P
Sbjct: 29  TYTVKPGDTLWGISQKYGITYTKLMALNGLQTTTIYPGQVLQVP 72


>tr|B0K0J3|B0K0J3_THEPX Cell wall hydrolase, SleB
           OS=Thermoanaerobacter sp. (strain X514) GN=Teth514_1429
           PE=3 SV=1
          Length = 267

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = +3

Query: 285 TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           TY +++GD+LY IA + G++V  LK ANGY  D IY G V  IP+
Sbjct: 77  TYVVQKGDSLYLIALKYGITVDMLKSANGYKSDIIYPGQVFIIPR 121



 Score = 36.2 bits (82), Expect = 1.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 285 TYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIP 416
           TY ++ GDTL+ I+ + G +   L   NG     IY G V+ +P
Sbjct: 29  TYTVKPGDTLWGISQKYGTTYTKLMSLNGLQSTVIYPGQVLQVP 72


>tr|B2UQB9|B2UQB9_AKKM8 Peptidoglycan-binding LysM OS=Akkermansia
           muciniphila (strain ATCC BAA-835) GN=Amuc_0821 PE=3 SV=1
          Length = 164

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 24/49 (48%), Positives = 32/49 (65%)
 Frame = +3

Query: 273 PKYTTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIPK 419
           PK  TY +++GDTL +IA RNG SV  LK ANG   D I+    ++IP+
Sbjct: 114 PKARTYTVKKGDTLGAIARRNGTSVKALKRANGLKSDLIHINQKLTIPR 162


>tr|Q8RNB5|Q8RNB5_BARHE NlpD (Antigen) (Virulence determinant)
           (Lipoptrotein) OS=Bartonella henselae GN=nlpD PE=4 SV=1
          Length = 392

 Score = 47.4 bits (111), Expect = 6e-04
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = +3

Query: 276 KYTTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIP 416
           +  +Y ++ GDTL SIA + GVSV  LK+ NG   + IY G V+ IP
Sbjct: 130 RQNSYIVQTGDTLLSIARQRGVSVEALKLVNGIRSNSIYIGQVLMIP 176


>tr|Q6WG12|Q6WG12_BARHE NlpD (Fragment) OS=Bartonella henselae
           GN=nlpD PE=4 SV=1
          Length = 164

 Score = 47.4 bits (111), Expect = 6e-04
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = +3

Query: 276 KYTTYHIERGDTLYSIAHRNGVSVHDLKVANGYDDDDIYAGDVMSIP 416
           +  +Y ++ GDTL SIA + GVSV  LK+ NG   + IY G V+ IP
Sbjct: 59  RQNSYIVQTGDTLLSIARQRGVSVEALKLVNGIRSNSIYIGQVLMIP 105