DK945177 |
Clone id |
YMU02A01NGRL0008_H19 |
Library |
YMU02 |
Length |
483 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_H19. 5' end sequence. |
Accession |
DK945177 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL182Contig1 |
Sequence |
CTCTTTTCGTCTCCTTCCGATCGTCTGTGCTGCTGCAGCAAACCAGCGGCCACGGTGAAC GTTCCAAAGACGAAGAAGTCCTTTTGCAAGGGCAAGGACTGCAAGAAGCACACTTTGCAT AAGGTGACTCAATACAAGAAGGGCAAGGACAGTCTCTATGTGCAAGGAAAGAGGCGTTAT GACAGGAAGCAATCTGGCTATGGTGGCCAAACAAAGCCGGTCTTCCACAAGAAGGCTAAG ACTACAAAGAAAATTGTGTTAAGGTTGCAATGTCAGAGTTGCAAGCATGTAACTCAGCAT CCAATCAAGCGATGCAAGCACTTTGAGATTGGTGGTGACAAGAAGCGCAAGGGTGCCATG TACTAGGTCAATTTTTGCAGCATCATGATGAATCGAAGAGTTTTGCTCAGACCTTTGCAC TGTTTTAAGTATTAAATTGAACTGAATTTTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96499 |
Definition |
sp|Q96499|RL44_GOSHI 60S ribosomal protein L44 OS=Gossypium hirsutum |
Align length |
100 |
Score (bit) |
169.0 |
E-value |
5.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9ST20 |
Definition |
tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
100 |
Score (bit) |
176.0 |
E-value |
5.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945177|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_H19, 5' (453 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella paten... 176 5e-43 tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella paten... 174 2e-42 tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 174 2e-42 tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella paten... 174 2e-42 tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genom... 171 2e-41 tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Popul... 171 2e-41 tr|B8LKF1|B8LKF1_PICSI Putative uncharacterized protein OS=Picea... 169 6e-41 tr|A7P2V6|A7P2V6_VITVI Chromosome chr1 scaffold_5, whole genome ... 169 6e-41 tr|A7P2V5|A7P2V5_VITVI Chromosome chr1 scaffold_5, whole genome ... 169 6e-41 tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa ... 169 6e-41 tr|Q8H5N0|Q8H5N0_ORYSJ Os07g0450000 protein OS=Oryza sativa subs... 167 2e-40 tr|Q0D5Z3|Q0D5Z3_ORYSJ Os07g0523100 protein OS=Oryza sativa subs... 167 2e-40 tr|B6TXV2|B6TXV2_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 167 2e-40 tr|B3TLV9|B3TLV9_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 167 2e-40 tr|B3TLU1|B3TLU1_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 167 2e-40 tr|B3TLU0|B3TLU0_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 167 2e-40 tr|A6N0K7|A6N0K7_ORYSI Putative uncharacterized protein OS=Oryza... 167 2e-40 tr|A9P9G6|A9P9G6_POPTR Putative uncharacterized protein OS=Popul... 166 4e-40 tr|Q94ER6|Q94ER6_BRARP 60S ribosomal protein L144 (Fragment) OS=... 165 1e-39 tr|Q0D5Z2|Q0D5Z2_ORYSJ Os07g0523300 protein (Fragment) OS=Oryza ... 165 1e-39 tr|Q6RI22|Q6RI22_9ASPA 60S ribosomal protein L44 OS=Phalaenopsis... 164 2e-39 tr|B6SIY6|B6SIY6_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 164 2e-39 tr|B6SHJ5|B6SHJ5_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 164 2e-39 tr|A9NQ93|A9NQ93_PICSI Putative uncharacterized protein OS=Picea... 164 2e-39 tr|B7FGY8|B7FGY8_MEDTR Putative uncharacterized protein OS=Medic... 164 3e-39 tr|B8LRK8|B8LRK8_PICSI Putative uncharacterized protein OS=Picea... 162 1e-38 tr|Q2V9C3|Q2V9C3_SOLTU Ribosomal protein L41-like OS=Solanum tub... 160 4e-38 tr|Q6B8B7|Q6B8B7_9ACAR Ribosomal protein L44 OS=Ixodes pacificus... 154 2e-36 tr|Q4PM81|Q4PM81_IXOSC 60S ribosomal protein L44, putative OS=Ix... 154 2e-36 tr|Q09JL5|Q09JL5_ARGMO Ribosomal protein L44 OS=Argas monolakens... 154 2e-36
>tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106959 PE=3 SV=1 Length = 105
Score = 176 bits (446), Expect = 5e-43 Identities = 84/100 (84%), Positives = 85/100 (85%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKSFCPGKACKKHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177351 PE=3 SV=1 Length = 105
Score = 174 bits (442), Expect = 2e-42 Identities = 83/100 (83%), Positives = 84/100 (84%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSLY QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKSFCPGKACKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129054 PE=3 SV=1 Length = 105
Score = 174 bits (442), Expect = 2e-42 Identities = 83/100 (83%), Positives = 84/100 (84%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSLY QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKSFCPGKACKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109414 PE=3 SV=1 Length = 105
Score = 174 bits (442), Expect = 2e-42 Identities = 83/100 (83%), Positives = 84/100 (84%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSLY QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKSFCPGKSCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028799001 PE=3 SV=1 Length = 115
Score = 171 bits (433), Expect = 2e-41 Identities = 82/104 (78%), Positives = 84/104 (80%) Frame = +1
Query: 43 PAATVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPV 222 P +VNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPV Sbjct: 8 PQFSVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPV 67
Query: 223 FHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 FHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 68 FHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 111
>tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=3 SV=1 Length = 105
Score = 171 bits (432), Expect = 2e-41 Identities = 82/100 (82%), Positives = 83/100 (83%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQSCKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKG 101
>tr|B8LKF1|B8LKF1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 105
Score = 169 bits (428), Expect = 6e-41 Identities = 81/100 (81%), Positives = 83/100 (83%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSL VQGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKTFCKNKACKKHTLHKVTQYKKGKDSLAVQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVL+LQCQSCKH +QHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>tr|A7P2V6|A7P2V6_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030200001 PE=3 SV=1 Length = 109
Score = 169 bits (428), Expect = 6e-41 Identities = 81/100 (81%), Positives = 82/100 (82%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 6 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 65
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 66 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 105
>tr|A7P2V5|A7P2V5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030198001 PE=3 SV=1 Length = 151
Score = 169 bits (428), Expect = 6e-41 Identities = 81/100 (81%), Positives = 82/100 (82%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 108 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa PE=3 SV=1 Length = 105
Score = 169 bits (428), Expect = 6e-41 Identities = 81/100 (81%), Positives = 82/100 (82%) Frame = +1
Query: 55 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 234 VNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 235 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 354 AKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 101
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