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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945192
Clone id YMU02A01NGRL0008_I10
Library
Length 240
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_I10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GGGTGGTCACGGAGGTCATCACTAGATCCAGCCTCTTCTCCTACCCTCACTCTATACATA
TCATGAGTACGTGCTCGCTTTGAGCGCTGAGCTCCCCTTCCTTCCTGTTTGTAAGTATTC
GAATGTTCGAAAGGTGAATAAAGTAGGCTAATATGTTGTAAGTTGCCTGTTTTGCTTATC
TTCGTCATCTTACCTAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P19524
Definition sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae
Align length 35
Score (bit) 29.3
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945192|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_I10, 5'
         (200 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae GN=MYO...    29   6.4  
sp|Q875X3|MYO2A_SACCA Myosin-2A OS=Saccharomyces castellii GN=MY...    29   8.4  

>sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae GN=MYO2
           PE=1 SV=1
          Length = 1574

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 160 YNILAYFIHLSNIRILTNRKEGELSAQSEHVLMIC 56
           + ILA  +H+ NI I   R +  LSA   ++ + C
Sbjct: 335 FKILAALLHIGNIEIKKTRNDASLSADEPNLKLAC 369


>sp|Q875X3|MYO2A_SACCA Myosin-2A OS=Saccharomyces castellii GN=MYO2A
           PE=3 SV=2
          Length = 1567

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 172 KQATYNILAYFIHLSNIRILTNRKEGELSAQSEHVLMIC 56
           +Q  + ILA  +H+ NI I   R +  LS+   ++ + C
Sbjct: 334 QQHIFKILAALLHIGNIEIKKTRNDSSLSSDEPNLKIAC 372
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945192|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_I10, 5'
         (200 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******