DK945195
Clone id YMU02A01NGRL0008_I13
Library
Length 261
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_I13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCTTGAGTTTCTTTTTTGAGCAGGCTTCTCTTTTTCAGATTGATGCTCCCTTTTGAGGTA
TAGTACTAGGGACTCTTGACACAGAAGAGTCTTTTGAGTCGGCTTGGCTTATGCTCATGT
GAAACTCATTTTTGAGCTCAAGCTTATTTTGAATGCTACGATTTTTTTTACTTTTGGGAC
ATTTTAATGAGTGTATCCAAGCTTGTTATTAGGATTAAAGGCTATGCTTTCAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q2TBE0
Definition sp|Q2TBE0|C19L2_HUMAN CWF19-like protein 2 OS=Homo sapiens
Align length 48
Score (bit) 35.0
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945195|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_I13, 5'
(231 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2TBE0|C19L2_HUMAN CWF19-like protein 2 OS=Homo sapiens GN=CW... 35 0.12
sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizos... 33 0.45
sp|Q9SI37|WRKY1_ARATH WRKY transcription factor 1 OS=Arabidopsis... 30 2.9

>sp|Q2TBE0|C19L2_HUMAN CWF19-like protein 2 OS=Homo sapiens
GN=CWF19L2 PE=1 SV=3
Length = 890

Score = 35.0 bits (79), Expect = 0.12
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = -3

Query: 193 HSLKCPKSKKNRSIQNKLELKNEFHMSISQADSKDSSVSRVPSTIPQK 50
HS K K KK +S + K E NE S S + S+D V VPS P K
Sbjct: 81 HSKKAKKEKKKKSKKQKYEKNNE--SSDSSSSSEDEWVEAVPSQTPDK 126


>sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3
OS=Schizosaccharomyces pombe GN=rrp3 PE=2 SV=1
Length = 465

Score = 33.1 bits (74), Expect = 0.45
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -3

Query: 184 KCPKSKKNRSIQNKLELKNEFHMSISQADSKDSSVSRVPSTIPQKGASI*KREACSKKKL 5
K + KKN S+ K+E N S+ ++ DS + P T + G EAC K
Sbjct: 7 KLTEDKKNSSLNKKIETSNSSSEKSSENNNGDSQNNEAPKTFKELGVIDELCEACEKLGF 66

Query: 4 K 2
K
Sbjct: 67 K 67


>sp|Q9SI37|WRKY1_ARATH WRKY transcription factor 1 OS=Arabidopsis
thaliana GN=WRKY1 PE=1 SV=1
Length = 487

Score = 30.4 bits (67), Expect = 2.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1

Query: 108 AKPTQKTLLCQESLVLYLKREHQSEKEKPAQ 16
AK KT +CQE V L+ E Q K +PAQ
Sbjct: 456 AKSDDKTTVCQEKAVGTLESEEQKPKTEPAQ 486


tr_hit_id Q16QT6
Definition tr|Q16QT6|Q16QT6_AEDAE Posterior sex combs protein OS=Aedes aegypti
Align length 66
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945195|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_I13, 5'
(231 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q16QT6|Q16QT6_AEDAE Posterior sex combs protein OS=Aedes aegy... 33 7.1

>tr|Q16QT6|Q16QT6_AEDAE Posterior sex combs protein OS=Aedes aegypti
GN=AAEL011178 PE=4 SV=1
Length = 1348

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = -3

Query: 205 QAWIHSLKCPKSKKNRSIQNKLELKNEFHMSISQADSKDSSVSRVPSTIPQKGASI*KRE 26
Q + S + PK KKN SI+ K+E+ ++SI Q+ D+ S KG + K++
Sbjct: 394 QQQVESSEQPKVKKNESIKLKIEMNKNTYVSILQSPQPDTVSKHHKS---DKGEKVKKKK 450

Query: 25 ACSKKK 8
+ K K
Sbjct: 451 SEDKDK 456