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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945203
Clone id YMU02A01NGRL0008_I23
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_I23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCGAACTGAAATCATTATTCGTGCAACAAGGACCCAGAATGTGCTTGGGGATAAGGGGAG
AAGAATCAGAGAGTTAACATCTTTGGTTCAGAAGAGGTTTAACTTTCCTGAAGGCACCGT
TGAATTGTATGCTGAGAAAGTTAACAATCGGGGTCTTTGTGCTATTGCACAAGCAGAGTC
ACTCCGTTACAAGCTTCTTGGAGGGCTTGCTGTCAGAAGGGCTTGCTATGGTGTCCTAAG
GTTTGTCATGGAGAGTGGCGCGAGGGTTGTGAGGTCATTGTGAGTGGTAAGCTGAGAGCC
CAGCGAGCGAAGTCGATGAAGTTCAAAGATGGGTATATGATTTCCTCTGGGCATCCTGTG
AACTTGTACATTGACTCTGCAGTTCGCCACGTGCTTTTGAGACAGGGAGTCTTGGGCATC
AAGGTCAAGATCATGTTGGATTGGGATCCCAAGGGCAAGCAAGGTCCGGCTATTCCTTTA
CCTGACAATGTCACAATTCACAGTCCCAAGGATGAAGAAGAACTCATCCCAAAATCAGTC
A
■■Homology search results ■■ -
sp_hit_id O60128
Definition sp|O60128|RS3_SCHPO 40S ribosomal protein S3 OS=Schizosaccharomyces pombe
Align length 87
Score (bit) 143.0
E-value 9.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945203|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_I23, 5'
         (541 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O60128|RS3_SCHPO 40S ribosomal protein S3 OS=Schizosaccharomy...   143   9e-60
sp|P05750|RS3_YEAST 40S ribosomal protein S3 OS=Saccharomyces ce...   127   5e-57
sp|P90526|RS3_DICDI 40S ribosomal protein S3 OS=Dictyostelium di...   117   4e-50
sp|Q9M339|RS32_ARATH 40S ribosomal protein S3-2 OS=Arabidopsis t...   160   3e-39
sp|Q9SIP7|RS31_ARATH 40S ribosomal protein S3-1 OS=Arabidopsis t...   160   3e-39
sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3 OS=Arabidopsis t...   159   8e-39
sp|P62909|RS3_RAT 40S ribosomal protein S3 OS=Rattus norvegicus ...   155   1e-37
sp|Q0Z8U2|RS3_PIG 40S ribosomal protein S3 OS=Sus scrofa GN=RPS3...   155   1e-37
sp|P62908|RS3_MOUSE 40S ribosomal protein S3 OS=Mus musculus GN=...   155   1e-37
sp|P23396|RS3_HUMAN 40S ribosomal protein S3 OS=Homo sapiens GN=...   155   1e-37
sp|Q3T169|RS3_BOVIN 40S ribosomal protein S3 OS=Bos taurus GN=RP...   155   1e-37
sp|P02350|RS31_XENLA 40S ribosomal protein S3-A OS=Xenopus laevi...   155   1e-37
sp|P79891|RS3_AMBME 40S ribosomal protein S3 OS=Ambystoma mexica...   154   3e-37
sp|Q5R465|RS3_PONAB 40S ribosomal protein S3 OS=Pongo abelii GN=...   154   3e-37
sp|P47835|RS32_XENLA 40S ribosomal protein S3-B OS=Xenopus laevi...   154   3e-37
sp|Q90YS2|RS3_ICTPU 40S ribosomal protein S3 OS=Ictalurus puncta...   153   5e-37
sp|P48153|RS3_MANSE 40S ribosomal protein S3 OS=Manduca sexta GN...   149   7e-36
sp|P48152|RS3_CAEEL 40S ribosomal protein S3 OS=Caenorhabditis e...   149   7e-36
sp|Q06559|RS3_DROME 40S ribosomal protein S3 OS=Drosophila melan...   144   2e-34
sp|Q8SQM3|RS3_ENCCU 40S ribosomal protein S3 OS=Encephalitozoon ...    96   1e-32
sp|Q8U004|RS3_PYRFU 30S ribosomal protein S3P OS=Pyrococcus furi...    60   3e-20
sp|Q9V1U1|RS3_PYRAB 30S ribosomal protein S3P OS=Pyrococcus abys...    59   2e-18
sp|O59424|RS3_PYRHO 30S ribosomal protein S3P OS=Pyrococcus hori...    58   3e-18
sp|Q5JDH5|RS3_PYRKO 30S ribosomal protein S3P OS=Pyrococcus koda...    55   4e-18
sp|Q46GA1|RS3_METBF 30S ribosomal protein S3P OS=Methanosarcina ...    60   3e-15
sp|Q8PV44|RS3_METMA 30S ribosomal protein S3P OS=Methanosarcina ...    61   4e-15
sp|A4FWB6|RS3_METM5 30S ribosomal protein S3P OS=Methanococcus m...    60   1e-14
sp|P20281|RS3_HALMA 30S ribosomal protein S3P OS=Haloarcula mari...    53   3e-14
sp|P54034|RS3_METJA 30S ribosomal protein S3P OS=Methanocaldococ...    51   4e-14
sp|Q6LXE7|RS3_METMP 30S ribosomal protein S3P OS=Methanococcus m...    58   2e-13

>sp|O60128|RS3_SCHPO 40S ribosomal protein S3 OS=Schizosaccharomyces
           pombe GN=rps3 PE=1 SV=1
          Length = 249

 Score =  143 bits (361), Expect(2) = 9e-60
 Identities = 72/87 (82%), Positives = 79/87 (90%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           R+EIIIRAT TQ+VLG+KGRRIRELT+LVQKRF F E TVELYAEKV NRGLCA+AQ ES
Sbjct: 47  RSEIIIRATHTQDVLGEKGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCES 106

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLL GLAVRRA YGVLR+VME+GA
Sbjct: 107 LRYKLLAGLAVRRAAYGVLRYVMEAGA 133



 Score =  106 bits (264), Expect(2) = 9e-60
 Identities = 56/88 (63%), Positives = 68/88 (77%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV++SGKLRA RAKSMKF DG+MI SG P   +IDSA RHVLLRQGVLG+KVKIML 
Sbjct: 134 KGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGVKVKIMLP 193

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEEL 525
            +PK +Q  +  LPD V +  PK+EE +
Sbjct: 194 -EPKTRQKKS--LPDIVVVLDPKEEEPI 218


>sp|P05750|RS3_YEAST 40S ribosomal protein S3 OS=Saccharomyces
           cerevisiae GN=RPS3 PE=1 SV=5
          Length = 240

 Score =  127 bits (318), Expect(2) = 5e-57
 Identities = 61/87 (70%), Positives = 76/87 (87%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           +TE+IIRATRTQ+VLG+ GRRI ELT LVQKRF +  GT+ LYAE+V +RGL A+AQAES
Sbjct: 45  KTEVIIRATRTQDVLGENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           +++KLL GLA+RRA YGV+R+VMESGA
Sbjct: 105 MKFKLLNGLAIRRAAYGVVRYVMESGA 131



 Score =  113 bits (283), Expect(2) = 5e-57
 Identities = 60/93 (64%), Positives = 72/93 (77%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV+VSGKLRA RAK+MKF DG++I SG PVN +ID+A RHVL+RQGVLGIKVKIM D
Sbjct: 132 KGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMRD 191

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEELIPKSV 540
              K + GP   LPD VTI  PK+EE ++  SV
Sbjct: 192 -PAKSRTGPK-ALPDAVTIIEPKEEEPILAPSV 222


>sp|P90526|RS3_DICDI 40S ribosomal protein S3 OS=Dictyostelium
           discoideum GN=rps3 PE=2 SV=1
          Length = 218

 Score =  117 bits (292), Expect(2) = 4e-50
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = +2

Query: 5   TEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESL 184
           TEIIIRA++TQ V+G   RRI+EL SLVQKRFNF EGTV L+AEK+ NRGLCA+AQAESL
Sbjct: 49  TEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESL 108

Query: 185 RYKLLGGLAVRRACYGVLRFVMESGA 262
           + KLL GL VR+ACY ++  +M  GA
Sbjct: 109 KLKLLAGLPVRKACYAIVHQIMTRGA 134



 Score =  100 bits (249), Expect(2) = 4e-50
 Identities = 55/81 (67%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEVIVSGKLRAQRAKSMKF+DGYMI SG P   +ID A RHVLLRQG LG+KV IML 
Sbjct: 135 KGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTLGVKVAIMLP 194

Query: 442 WDPKGKQGPA--IPLPDNVTI 498
           +D   K   A  IP PD V I
Sbjct: 195 YDETRKIHGACNIPQPDVVVI 215


>sp|Q9M339|RS32_ARATH 40S ribosomal protein S3-2 OS=Arabidopsis
           thaliana GN=RPS3B PE=2 SV=1
          Length = 249

 Score =  160 bits (406), Expect = 3e-39
 Identities = 82/87 (94%), Positives = 84/87 (96%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRATRTQNVLG+KGRRIRELTSLVQKRF FP  +VELYAEKVNNRGLCAIAQAES
Sbjct: 45  RTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRACYGVLRFVMESGA
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFVMESGA 131



 Score =  148 bits (374), Expect = 1e-35
 Identities = 74/103 (71%), Positives = 81/103 (78%), Gaps = 7/103 (6%)
 Frame = +1

Query: 238 KVCHGEWR-------EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVL 396
           + C+G  R       +GCEVIVSGKLRA RAKSMKFKDGYM+SSG P   YIDSAVRHVL
Sbjct: 117 RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVL 176

Query: 397 LRQGVLGIKVKIMLDWDPKGKQGPAIPLPDNVTIHSPKDEEEL 525
           LRQGVLGIKVK+MLDWDPKG  GP  PLPD V IHSPK+EE +
Sbjct: 177 LRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAI 219


>sp|Q9SIP7|RS31_ARATH 40S ribosomal protein S3-1 OS=Arabidopsis
           thaliana GN=RPS3A PE=2 SV=1
          Length = 250

 Score =  160 bits (406), Expect = 3e-39
 Identities = 82/87 (94%), Positives = 84/87 (96%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRATRTQNVLG+KGRRIRELTSLVQKRF FP  +VELYAEKVNNRGLCAIAQAES
Sbjct: 45  RTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRACYGVLRFVMESGA
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFVMESGA 131



 Score =  145 bits (366), Expect = 1e-34
 Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 7/100 (7%)
 Frame = +1

Query: 238 KVCHGEWR-------EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVL 396
           + C+G  R       +GCEVIVSGKLRA RAKSMKFKDGYM+SSG P   YID+AVRHVL
Sbjct: 117 RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVL 176

Query: 397 LRQGVLGIKVKIMLDWDPKGKQGPAIPLPDNVTIHSPKDE 516
           LRQGVLGIKVKIMLDWDP GK GP  PLPD V IH+PKD+
Sbjct: 177 LRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDD 216


>sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3 OS=Arabidopsis
           thaliana GN=RPS3C PE=2 SV=1
          Length = 248

 Score =  159 bits (402), Expect = 8e-39
 Identities = 81/87 (93%), Positives = 84/87 (96%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRATRTQNVLG+KGRRIRELTSLVQKRF FP+ +VELYAEKV NRGLCAIAQAES
Sbjct: 45  RTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRACYGVLRFVMESGA
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFVMESGA 131



 Score =  148 bits (374), Expect = 1e-35
 Identities = 73/104 (70%), Positives = 83/104 (79%), Gaps = 7/104 (6%)
 Frame = +1

Query: 238 KVCHGEWR-------EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVL 396
           + C+G  R       +GCEVIVSGKLRA RAKSMKFKDGYM+SSG P   YID+AVRHVL
Sbjct: 117 RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVL 176

Query: 397 LRQGVLGIKVKIMLDWDPKGKQGPAIPLPDNVTIHSPKDEEELI 528
           LRQGVLG+KVKIMLDWDPKGKQGP  PLPD V IH+PK+++  I
Sbjct: 177 LRQGVLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYI 220


>sp|P62909|RS3_RAT 40S ribosomal protein S3 OS=Rattus norvegicus
           GN=Rps3 PE=2 SV=1
          Length = 243

 Score =  155 bits (392), Expect = 1e-37
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIII ATRTQNVLG+KGRRIRELT++VQKRF FPEG+VELYAEKV  RGLCAIAQAES
Sbjct: 45  RTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRACYGVLRF+MESGA
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFIMESGA 131



 Score =  137 bits (344), Expect = 4e-32
 Identities = 69/100 (69%), Positives = 77/100 (77%), Gaps = 7/100 (7%)
 Frame = +1

Query: 238 KVCHGEWR-------EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVL 396
           + C+G  R       +GCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVL
Sbjct: 117 RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVL 176

Query: 397 LRQGVLGIKVKIMLDWDPKGKQGPAIPLPDNVTIHSPKDE 516
           LRQGVLGIKVKIML WDP GK GP  PLPD+V+I  PKDE
Sbjct: 177 LRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216


>sp|Q0Z8U2|RS3_PIG 40S ribosomal protein S3 OS=Sus scrofa GN=RPS3
           PE=2 SV=1
          Length = 243

 Score =  155 bits (392), Expect = 1e-37
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIII ATRTQNVLG+KGRRIRELT++VQKRF FPEG+VELYAEKV  RGLCAIAQAES
Sbjct: 45  RTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRACYGVLRF+MESGA
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFIMESGA 131



 Score =  136 bits (343), Expect = 6e-32
 Identities = 69/100 (69%), Positives = 77/100 (77%), Gaps = 7/100 (7%)
 Frame = +1

Query: 238 KVCHGEWR-------EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVL 396
           + C+G  R       +GCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVL
Sbjct: 117 RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVL 176

Query: 397 LRQGVLGIKVKIMLDWDPKGKQGPAIPLPDNVTIHSPKDE 516
           LRQGVLGIKVKIML WDP GK GP  PLPD+V+I  PKDE
Sbjct: 177 LRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216


>sp|P62908|RS3_MOUSE 40S ribosomal protein S3 OS=Mus musculus
           GN=Rps3 PE=1 SV=1
          Length = 243

 Score =  155 bits (392), Expect = 1e-37
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIII ATRTQNVLG+KGRRIRELT++VQKRF FPEG+VELYAEKV  RGLCAIAQAES
Sbjct: 45  RTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRACYGVLRF+MESGA
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFIMESGA 131



 Score =  137 bits (344), Expect = 4e-32
 Identities = 69/100 (69%), Positives = 77/100 (77%), Gaps = 7/100 (7%)
 Frame = +1

Query: 238 KVCHGEWR-------EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVL 396
           + C+G  R       +GCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVL
Sbjct: 117 RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVL 176

Query: 397 LRQGVLGIKVKIMLDWDPKGKQGPAIPLPDNVTIHSPKDE 516
           LRQGVLGIKVKIML WDP GK GP  PLPD+V+I  PKDE
Sbjct: 177 LRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216


>sp|P23396|RS3_HUMAN 40S ribosomal protein S3 OS=Homo sapiens
           GN=RPS3 PE=1 SV=2
          Length = 243

 Score =  155 bits (392), Expect = 1e-37
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIII ATRTQNVLG+KGRRIRELT++VQKRF FPEG+VELYAEKV  RGLCAIAQAES
Sbjct: 45  RTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRACYGVLRF+MESGA
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFIMESGA 131



 Score =  136 bits (343), Expect = 6e-32
 Identities = 69/100 (69%), Positives = 77/100 (77%), Gaps = 7/100 (7%)
 Frame = +1

Query: 238 KVCHGEWR-------EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVL 396
           + C+G  R       +GCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVL
Sbjct: 117 RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVL 176

Query: 397 LRQGVLGIKVKIMLDWDPKGKQGPAIPLPDNVTIHSPKDE 516
           LRQGVLGIKVKIML WDP GK GP  PLPD+V+I  PKDE
Sbjct: 177 LRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
tr_hit_id Q2PYZ0
Definition tr|Q2PYZ0|Q2PYZ0_SOLTU 40S ribosomal protein-like protein OS=Solanum tuberosum
Align length 86
Score (bit) 158.0
E-value 7.0e-74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945203|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_I23, 5'
         (541 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2PYZ0|Q2PYZ0_SOLTU 40S ribosomal protein-like protein OS=Sol...   158   7e-74
tr|Q6JWW3|Q6JWW3_OIKDI 40S ribosomal protein S3 OS=Oikopleura di...   140   4e-63
tr|Q4U9P5|Q4U9P5_THEAN 40S ribosomal protein S3, putative OS=The...   137   3e-61
tr|Q4N2D0|Q4N2D0_THEPA 40S ribosomal protein S3, putative OS=The...   137   3e-61
tr|A8Q4L6|A8Q4L6_MALGO Putative uncharacterized protein OS=Malas...   137   2e-60
tr|Q4PAA7|Q4PAA7_USTMA Putative uncharacterized protein OS=Ustil...   145   4e-58
tr|A7AT61|A7AT61_BABBO 40S ribosomal protein S3 protein, putativ...   132   4e-58
tr|B6K7U2|B6K7U2_SCHJP 40S ribosomal protein S3 OS=Schizosacchar...   143   2e-57
tr|A7TP90|A7TP90_VANPO Putative uncharacterized protein OS=Vande...   128   7e-56
tr|B5VQM9|B5VQM9_YEAS6 YNL178Wp-like protein OS=Saccharomyces ce...   127   9e-56
tr|B3LP29|B3LP29_YEAS1 Ribosomal protein S3 OS=Saccharomyces cer...   127   9e-56
tr|A6ZRQ7|A6ZRQ7_YEAS7 Ribosomal protein S3 OS=Saccharomyces cer...   127   9e-56
tr|Q75E11|Q75E11_ASHGO ABL138Wp OS=Ashbya gossypii GN=ABL138W PE...   125   3e-55
tr|Q6FNJ4|Q6FNJ4_CANGA Similar to uniprot|P05750 Saccharomyces c...   127   5e-55
tr|Q6CRK7|Q6CRK7_KLULA KLLA0D08305p OS=Kluyveromyces lactis GN=K...   122   8e-54
tr|Q6C4U1|Q6C4U1_YARLI YALI0E23694p OS=Yarrowia lipolytica GN=YA...   124   4e-53
tr|A9BL58|A9BL58_9CRYP Rps3 OS=Cryptophyta GN=HAN_3g438 PE=3 SV=1     112   2e-50
tr|B0ESV0|B0ESV0_ENTDI 40S ribosomal protein S3-3, putative OS=E...   109   2e-49
tr|B0EL05|B0EL05_ENTDI 40S ribosomal protein S3-3, putative OS=E...   109   2e-49
tr|A5AXX8|A5AXX8_VITVI Putative uncharacterized protein OS=Vitis...   162   2e-48
tr|A7NTL0|A7NTL0_VITVI Chromosome chr18 scaffold_1, whole genome...   107   3e-48
tr|Q4Q4A0|Q4Q4A0_LEIMA 40S ribosomal protein S3, putative OS=Lei...   114   8e-48
tr|A4HWJ3|A4HWJ3_LEIIN 40S ribosomal protein S3, putative OS=Lei...   114   8e-48
tr|A4H868|A4H868_LEIBR 40S ribosomal protein S3, putative OS=Lei...   114   8e-48
tr|A4HLE6|A4HLE6_LEIBR 40S ribosomal protein S3, putative OS=Lei...   114   1e-47
tr|Q98S35|Q98S35_GUITH 40S ribosomal protein S3 OS=Guillardia th...   105   2e-46
tr|A5E0W8|A5E0W8_LODEL 40S ribosomal protein S3 OS=Lodderomyces ...   103   6e-45
tr|Q4DMK9|Q4DMK9_TRYCR 40S ribosomal protein S3, putative OS=Try...   116   1e-44
tr|Q4CUL0|Q4CUL0_TRYCR 40S ribosomal protein S3, putative OS=Try...   116   2e-44
tr|A5DF26|A5DF26_PICGU Putative uncharacterized protein OS=Pichi...   102   2e-44

>tr|Q2PYZ0|Q2PYZ0_SOLTU 40S ribosomal protein-like protein
           OS=Solanum tuberosum PE=2 SV=1
          Length = 240

 Score =  158 bits (400), Expect(2) = 7e-74
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRATRTQNVLG+KGRRIR LTS+VQKRFNF E +VELYAEKVNNRGLCAIAQAES
Sbjct: 46  RTEIIIRATRTQNVLGEKGRRIRSLTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAES 105

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESG 259
           LRYKLLGGLAVRRACYGVLRFVMESG
Sbjct: 106 LRYKLLGGLAVRRACYGVLRFVMESG 131



 Score =  142 bits (358), Expect(2) = 7e-74
 Identities = 72/89 (80%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
 Frame = +1

Query: 265 GCEV-IVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           GCEV  VSGKLRAQRAKSMK  DGYMISSG PV+ Y+D+AVRHVLLRQGVLGIKVKIMLD
Sbjct: 135 GCEVDSVSGKLRAQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLLRQGVLGIKVKIMLD 194

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEELI 528
           WDPKGKQGP  PLPD VTIH PK+E E +
Sbjct: 195 WDPKGKQGPMTPLPDLVTIHPPKEEGEFV 223


>tr|Q6JWW3|Q6JWW3_OIKDI 40S ribosomal protein S3 OS=Oikopleura
           dioica GN=RS3 PE=4 SV=1
          Length = 239

 Score =  140 bits (354), Expect(2) = 4e-63
 Identities = 72/87 (82%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIII ATRTQNVLGDK +RIRELT+LVQKRF   +G VEL+AEKV NRGLCAIAQ ES
Sbjct: 48  RTEIIILATRTQNVLGDKAKRIRELTALVQKRFQIKDGAVELFAEKVANRGLCAIAQCES 107

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKL GGLAVRRA YGVLRF+MESGA
Sbjct: 108 LRYKLEGGLAVRRAAYGVLRFIMESGA 134



 Score =  124 bits (311), Expect(2) = 4e-63
 Identities = 60/93 (64%), Positives = 72/93 (77%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV++SGKLR QRAK+MKF DG MI +GHPV  Y+D+AVRHV+LRQGV+G+KVK+ML 
Sbjct: 135 KGCEVVISGKLRGQRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQGVIGLKVKVMLP 194

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEELIPKSV 540
            DP GK GP  P PD V I  PK  EE+IP  V
Sbjct: 195 HDPAGKVGPKTPYPDIVEIREPK--EEVIPVDV 225


>tr|Q4U9P5|Q4U9P5_THEAN 40S ribosomal protein S3, putative
           OS=Theileria annulata GN=TA08340 PE=4 SV=1
          Length = 216

 Score =  137 bits (344), Expect(2) = 3e-61
 Identities = 70/87 (80%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRATRT+ VLG+K RRIRELTSLVQKRF F   +VELYAE+V NRGLCA+AQAES
Sbjct: 46  RTEIIIRATRTREVLGEKARRIRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAES 105

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLL GLA+RRA YGVLR +MESGA
Sbjct: 106 LRYKLLKGLAIRRAAYGVLRQIMESGA 132



 Score =  121 bits (304), Expect(2) = 3e-61
 Identities = 59/83 (71%), Positives = 70/83 (84%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEVIVSGKLRAQRAKSMKFKDGY+IS+G P   Y+++AVR V LRQGVLGIKVKIML 
Sbjct: 133 KGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIKVKIMLP 192

Query: 442 WDPKGKQGPAIPLPDNVTIHSPK 510
           +DP+G+ GP+  LPD VT+  PK
Sbjct: 193 YDPEGRLGPSTLLPDTVTVLDPK 215


>tr|Q4N2D0|Q4N2D0_THEPA 40S ribosomal protein S3, putative
           OS=Theileria parva GN=TP04_0421 PE=4 SV=1
          Length = 216

 Score =  137 bits (344), Expect(2) = 3e-61
 Identities = 70/87 (80%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRATRT+ VLG+K RRIRELTSLVQKRF F   +VELYAE+V NRGLCA+AQAES
Sbjct: 47  RTEIIIRATRTREVLGEKARRIRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAES 106

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLL GLA+RRA YGVLR +MESGA
Sbjct: 107 LRYKLLKGLAIRRAAYGVLRQIMESGA 133



 Score =  121 bits (304), Expect(2) = 3e-61
 Identities = 59/83 (71%), Positives = 70/83 (84%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEVIVSGKLRAQRAKSMKFKDGY+IS+G P   Y+++AVR V LRQGVLGIKVKIML 
Sbjct: 134 KGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIKVKIMLP 193

Query: 442 WDPKGKQGPAIPLPDNVTIHSPK 510
           +DP+G+ GP+  LPD VT+  PK
Sbjct: 194 YDPEGRLGPSTLLPDTVTVLDPK 216


>tr|A8Q4L6|A8Q4L6_MALGO Putative uncharacterized protein
           OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
           GN=MGL_2567 PE=4 SV=1
          Length = 264

 Score =  137 bits (346), Expect(2) = 2e-60
 Identities = 70/87 (80%), Positives = 78/87 (89%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRAT TQ VLGDKGRR+RELT+LV++RF FPEG++ELYAEKV NRGL A+AQ ES
Sbjct: 46  RTEIIIRATHTQEVLGDKGRRLRELTTLVRQRFRFPEGSLELYAEKVANRGLHAVAQCES 105

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LR KLLGGL VRRA YGVLR+VMESGA
Sbjct: 106 LRNKLLGGLPVRRAAYGVLRYVMESGA 132



 Score =  118 bits (296), Expect(2) = 2e-60
 Identities = 52/88 (59%), Positives = 69/88 (78%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV++SGK+R  RAKSMKF DG+MI +G P   ++D A+RHVL++QGVLG+KVKIM  
Sbjct: 133 KGCEVVISGKVRGARAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQGVLGLKVKIMHG 192

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEEL 525
           WDP+G+ G   PLPD VTI  PK++E +
Sbjct: 193 WDPEGRSGRPFPLPDAVTILEPKEDEPI 220


>tr|Q4PAA7|Q4PAA7_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM02956.1 PE=4 SV=1
          Length = 239

 Score =  145 bits (366), Expect(2) = 4e-58
 Identities = 74/87 (85%), Positives = 79/87 (90%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRAT TQ VLGDKGRRIRELT+LVQKRF FP+ ++ELYAEKV NRGL A+AQ ES
Sbjct: 46  RTEIIIRATHTQEVLGDKGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCES 105

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLLGGLAVRRA YGVLRFVMESGA
Sbjct: 106 LRYKLLGGLAVRRAAYGVLRFVMESGA 132



 Score =  102 bits (255), Expect(2) = 4e-58
 Identities = 51/85 (60%), Positives = 61/85 (71%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV++SGKLRA RAKSMKF D +           +D AVRHVL++QGVLGIKVKIM  
Sbjct: 133 KGCEVVISGKLRAARAKSMKFTDDF-----------VDEAVRHVLMKQGVLGIKVKIMQG 181

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDE 516
           WDP+G+ G   PLPD VTI  PK+E
Sbjct: 182 WDPEGRAGKPFPLPDAVTILEPKEE 206


>tr|A7AT61|A7AT61_BABBO 40S ribosomal protein S3 protein, putative
           OS=Babesia bovis GN=BBOV_II001650 PE=4 SV=1
          Length = 223

 Score =  132 bits (333), Expect(2) = 4e-58
 Identities = 67/87 (77%), Positives = 76/87 (87%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           RTEIIIRATR + V+G+K RRIRELTSL+QKRF F   TVELYAE+V ++GLCA+AQAES
Sbjct: 47  RTEIIIRATRAREVVGEKARRIRELTSLIQKRFGFSPDTVELYAERVEHKGLCAMAQAES 106

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLL GLAVRRA YGVLR +MESGA
Sbjct: 107 LRYKLLKGLAVRRAAYGVLRHIMESGA 133



 Score =  115 bits (288), Expect(2) = 4e-58
 Identities = 55/87 (63%), Positives = 67/87 (77%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEVIVSGKLRAQRAKSMKFKDGY+IS+G P   ++ SA R V LRQGVLGIKVKIM  
Sbjct: 134 KGCEVIVSGKLRAQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQGVLGIKVKIMHP 193

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEE 522
            DP+G+ GP+  +PD +T+  P  + E
Sbjct: 194 HDPEGRLGPSTVMPDTITVKEPSPDME 220


>tr|B6K7U2|B6K7U2_SCHJP 40S ribosomal protein S3
           OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_04814
           PE=4 SV=1
          Length = 251

 Score =  143 bits (361), Expect(2) = 2e-57
 Identities = 72/87 (82%), Positives = 79/87 (90%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           R+EIIIRAT TQ+VLG+KGRRIRELT+LVQKRF F E TVELYAEKV NRGLCA+AQ ES
Sbjct: 46  RSEIIIRATHTQDVLGEKGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCES 105

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           LRYKLL GLAVRRA YGVLR+VME+GA
Sbjct: 106 LRYKLLAGLAVRRAAYGVLRYVMEAGA 132



 Score =  102 bits (254), Expect(2) = 2e-57
 Identities = 54/85 (63%), Positives = 65/85 (76%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV++SGKLRA RAKSMKF DG+MI SG P   +ID A RHVLLRQGVLG+KVKIML 
Sbjct: 133 KGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQGVLGVKVKIMLP 192

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDE 516
            +PK +Q  +  LPD V +  PK+E
Sbjct: 193 -EPKTRQKKS--LPDAVVVLDPKEE 214


>tr|A7TP90|A7TP90_VANPO Putative uncharacterized protein
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=Kpol_480p28 PE=3 SV=1
          Length = 234

 Score =  128 bits (322), Expect(2) = 7e-56
 Identities = 63/87 (72%), Positives = 76/87 (87%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           +TEIIIRATRTQ+VLG+ GRRI ELT LVQKRF F  GT+ LYAE+V +RGL A+AQAES
Sbjct: 45  KTEIIIRATRTQDVLGENGRRINELTLLVQKRFKFKPGTIVLYAERVQDRGLSAVAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           +++KLL GLA+RRA YGV+R+VMESGA
Sbjct: 105 MKFKLLNGLAIRRAAYGVVRYVMESGA 131



 Score =  112 bits (280), Expect(2) = 7e-56
 Identities = 60/93 (64%), Positives = 72/93 (77%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV+VSGKLRA RAK+MKF DG++I SG PVN +ID A RHVL+RQGVLGIKVKIM D
Sbjct: 132 KGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGIKVKIMRD 191

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEELIPKSV 540
              + K GP   LPD VTI  PK+EE+++  SV
Sbjct: 192 -PARSKVGPR-ALPDAVTIVEPKEEEKILVPSV 222


>tr|B5VQM9|B5VQM9_YEAS6 YNL178Wp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_141510 PE=4
           SV=1
          Length = 240

 Score =  127 bits (318), Expect(2) = 9e-56
 Identities = 61/87 (70%), Positives = 76/87 (87%)
 Frame = +2

Query: 2   RTEIIIRATRTQNVLGDKGRRIRELTSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAES 181
           +TE+IIRATRTQ+VLG+ GRRI ELT LVQKRF +  GT+ LYAE+V +RGL A+AQAES
Sbjct: 45  KTEVIIRATRTQDVLGENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAES 104

Query: 182 LRYKLLGGLAVRRACYGVLRFVMESGA 262
           +++KLL GLA+RRA YGV+R+VMESGA
Sbjct: 105 MKFKLLNGLAIRRAAYGVVRYVMESGA 131



 Score =  113 bits (283), Expect(2) = 9e-56
 Identities = 60/93 (64%), Positives = 72/93 (77%)
 Frame = +1

Query: 262 EGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIMLD 441
           +GCEV+VSGKLRA RAK+MKF DG++I SG PVN +ID+A RHVL+RQGVLGIKVKIM D
Sbjct: 132 KGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMRD 191

Query: 442 WDPKGKQGPAIPLPDNVTIHSPKDEEELIPKSV 540
              K + GP   LPD VTI  PK+EE ++  SV
Sbjct: 192 -PAKSRTGPK-ALPDAVTIIEPKEEEPILAPSV 222