DK945225 |
Clone id |
YMU02A01NGRL0008_K02 |
Library |
YMU02 |
Length |
577 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_K02. 5' end sequence. |
Accession |
DK945225 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL84Contig1 |
Sequence |
CTTTTCTCTCTGAGGTTTCCTGTTTCCGAGCTCCTACAGGCAACTATGTCTGGCAAGAGG AAGACCAAGGAGGTGAAGGAGGAGAATGTTACTCTTAGTGGACCTGGTGCCCGTGATGGC GAGCATGTCTTTGGAGTTGCGCATATCTTTGCTTCATTCAATGACACCTTTGTGCATGTC ACTGATCTGTCTGGCAAGGAGACACTTGCTCGTGTTACGGGTGGCATGAAGGTGAAAGCT GACAGAGACGAGTCTTCCCCGTATGCAGCCATGCTTGCTGCTCAGGATGTAGCTCAGAGG TGCAAGGAGTTGGGGATAACAGCTCTGCACATAAAGCTGAGGGCAACTGGCGGGAACAAG ACCAAGACACCCGGGCCTGGTGCACAGTCAGCATTGAGAGCACTTGCTCGTTCTGGCATG AGGATCGGACGAATTGAGGATGTCACCCCTATCCCGACAGACAGCACACGAAGGANAGGT GGTCGGAGAGGTCGCAGGCTGTAAGGCCAGCCTCAGGACTGTTTGGATTTACATCTAGTT TACCTTTGTTTAGGACAATTTTTTTTTCCGTCAACAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P19951 |
Definition |
sp|P19951|RS142_MAIZE 40S ribosomal protein S14 OS=Zea mays |
Align length |
141 |
Score (bit) |
221.0 |
E-value |
3.0e-57 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TTN2 |
Definition |
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
141 |
Score (bit) |
228.0 |
E-value |
2.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945225|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_K02, 5' (577 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella paten... 228 2e-58 tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella paten... 225 1e-57 tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea m... 225 2e-57 tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea... 223 8e-57 tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome... 223 8e-57 tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subs... 222 1e-56 tr|Q01IS6|Q01IS6_ORYSA OSIGBa0134P10.10 protein (OSIGBa0137L20.1... 222 1e-56 tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Popul... 222 1e-56 tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, who... 222 1e-56 tr|A2XT84|A2XT84_ORYSI Putative uncharacterized protein OS=Oryza... 222 1e-56 tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensi... 220 4e-56 tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whol... 220 4e-56 tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis... 220 4e-56 tr|A3ATP4|A3ATP4_ORYSJ Putative uncharacterized protein OS=Oryza... 220 4e-56 tr|A9PBW7|A9PBW7_POPTR Putative uncharacterized protein OS=Popul... 220 5e-56 tr|A9P8E9|A9P8E9_POPTR Putative uncharacterized protein OS=Popul... 220 5e-56 tr|A9PDF0|A9PDF0_POPTR Putative uncharacterized protein OS=Popul... 219 7e-56 tr|A9PIB5|A9PIB5_POPTR Putative uncharacterized protein OS=Popul... 219 1e-55 tr|Q6H7T1|Q6H7T1_ORYSJ Os02g0162500 protein OS=Oryza sativa subs... 218 1e-55 tr|B8AI71|B8AI71_ORYSI Putative uncharacterized protein OS=Oryza... 218 1e-55 tr|B4FJ48|B4FJ48_MAIZE Putative uncharacterized protein OS=Zea m... 218 2e-55 tr|B4FBS3|B4FBS3_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 218 2e-55 tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea... 218 2e-55 tr|B6UH09|B6UH09_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 218 2e-55 tr|B6T522|B6T522_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 217 3e-55 tr|B6T281|B6T281_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 216 7e-55 tr|Q84X98|Q84X98_BRANA Cytoplasmic ribosomal protein S14 OS=Bras... 215 2e-54 tr|B6UHC8|B6UHC8_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 214 2e-54 tr|Q1H555|Q1H555_ARATH At3g11510 OS=Arabidopsis thaliana PE=2 SV=1 213 5e-54 tr|A3A7N0|A3A7N0_ORYSJ Putative uncharacterized protein OS=Oryza... 213 5e-54
>tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198161 PE=3 SV=1 Length = 151
Score = 228 bits (580), Expect = 2e-58 Identities = 119/141 (84%), Positives = 123/141 (87%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MSGK+K + KEENVTL GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGG Sbjct: 1 MSGKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDE+SPYAAMLAAQDVAQRCKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 ARSGMRIGRIEDVTPIPTDST Sbjct: 120 ARSGMRIGRIEDVTPIPTDST 140
>tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223910 PE=4 SV=1 Length = 151
Score = 225 bits (574), Expect = 1e-57 Identities = 118/141 (83%), Positives = 122/141 (86%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MSGK+K + KEENVTL GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGG Sbjct: 1 MSGKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDE+SPYAAMLAAQDVAQRCKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 ARS MRIGRIEDVTPIPTDST Sbjct: 120 ARSNMRIGRIEDVTPIPTDST 140
>tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 151
Score = 225 bits (573), Expect = 2e-57 Identities = 114/141 (80%), Positives = 124/141 (87%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MSG++KT+E KEENVTL GP R+GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDESSPYAAMLA+QDVAQRCKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
>tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 151
Score = 223 bits (567), Expect = 8e-57 Identities = 116/141 (82%), Positives = 123/141 (87%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MSGK+K +E KE+NVTL GP R+GE VFGVAHIFASFNDTFVHVTDLSGKET+ARVTGG Sbjct: 1 MSGKKKVREPKEDNVTL-GPTVREGEQVFGVAHIFASFNDTFVHVTDLSGKETIARVTGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDESSPYAAMLAAQDVAQRCKELG+TALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLAAQDVAQRCKELGLTALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 ARSGM+IGRIEDVTPIPTDST Sbjct: 120 ARSGMKIGRIEDVTPIPTDST 140
>tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021579001 PE=3 SV=1 Length = 173
Score = 223 bits (567), Expect = 8e-57 Identities = 115/142 (80%), Positives = 121/142 (85%) Frame = +1
Query: 43 TMSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTG 222 T + +RK +E KEENVTL GP RDGEH FGVAHIFASFNDTF+HVTDLSG+ETL R+TG Sbjct: 22 TFNSRRKVREPKEENVTL-GPTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITG 80
Query: 223 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRA 402 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA AQSALRA Sbjct: 81 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRA 140
Query: 403 LARSGMRIGRIEDVTPIPTDST 468 LARSGMRIGRIEDVTPIPTDST Sbjct: 141 LARSGMRIGRIEDVTPIPTDST 162
>tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subsp. japonica GN=OJ000126_13.9 PE=2 SV=2 Length = 151
Score = 222 bits (565), Expect = 1e-56 Identities = 113/141 (80%), Positives = 124/141 (87%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MSG++KT+E KEENVTL GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDESSPYAAMLA+QDVAQRCKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
>tr|Q01IS6|Q01IS6_ORYSA OSIGBa0134P10.10 protein (OSIGBa0137L20.1 protein) OS=Oryza sativa GN=OSIGBa0134P10.10 PE=3 SV=1 Length = 151
Score = 222 bits (565), Expect = 1e-56 Identities = 113/141 (80%), Positives = 124/141 (87%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MSG++KT+E KEENVTL GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDESSPYAAMLA+QDVAQRCKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
>tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 151
Score = 222 bits (565), Expect = 1e-56 Identities = 114/141 (80%), Positives = 122/141 (86%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MS +RKT+E KEENVTL GP R+GEH FGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSSRRKTREPKEENVTL-GPTVREGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 +RSGMRIGRIEDVTPIPTDST Sbjct: 120 SRSGMRIGRIEDVTPIPTDST 140
>tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003445001 PE=3 SV=1 Length = 156
Score = 222 bits (565), Expect = 1e-56 Identities = 115/138 (83%), Positives = 120/138 (86%) Frame = +1
Query: 55 KRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 234 +RK +E KEENVTL GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV Sbjct: 9 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 67
Query: 235 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARS 414 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA AQSALRALARS Sbjct: 68 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 127
Query: 415 GMRIGRIEDVTPIPTDST 468 GMRIGRIEDVTPIPTDST Sbjct: 128 GMRIGRIEDVTPIPTDST 145
>tr|A2XT84|A2XT84_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07537 PE=3 SV=1 Length = 151
Score = 222 bits (565), Expect = 1e-56 Identities = 113/141 (80%), Positives = 124/141 (87%) Frame = +1
Query: 46 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 225 MSG++KT+E KEENVTL GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 226 MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 405 MKVKADRDESSPYAAMLA+QDVAQRCKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 406 ARSGMRIGRIEDVTPIPTDST 468 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
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