BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945231|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K09, 5'
         (260 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q1LV19|SPKAP_DANRE A-kinase anchor protein SPHKAP OS=Danio re...    30   2.8  
sp|Q88893|POL1_TRSVB RNA1 polyprotein OS=Tobacco ringspot virus ...    29   8.2  
sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli GN=A...    29   8.2  

>sp|Q1LV19|SPKAP_DANRE A-kinase anchor protein SPHKAP OS=Danio rerio
           GN=sphkap PE=3 SV=1
          Length = 1596

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +3

Query: 24  DRLLQLSSDGVSQVSEPVHGGRGMVRCIQHNCGAPRRPPGCSFEGPNLII 173
           D  ++LS D  S V+E       +   I H+  AP+R   CSFE P ++I
Sbjct: 338 DAFIRLSQDEPSFVAE---AAVSVSSDISHSTEAPQRARACSFELPKIVI 384


>sp|Q88893|POL1_TRSVB RNA1 polyprotein OS=Tobacco ringspot virus
            (strain Bud Blight) PE=3 SV=1
          Length = 2304

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 24   DRLLQLSSDGVSQVSEPVHGGRGMVRCIQHNCGAPRRPPGCS 149
            D+L+  +S+G   V E  HG +G  R  +   GA    PG S
Sbjct: 1621 DKLIMDTSEGYPYVLERTHGEKGKTRYFEGGPGAYTLKPGTS 1662


>sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli GN=Ahr
           PE=2 SV=1
          Length = 854

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 207 KHYMEISSKLQGLSGWDPQKNNLEGASEHRNCAVCNAPYRARH 79
           KHY  + S LQG +   P K  ++G    +N A CN P    H
Sbjct: 678 KHY-HLFSSLQGTAQEFPYKPEVDGMPYTQNFAPCNQPLLPEH 719

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945231|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K09, 5'
         (260 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******