DK945234
Clone id YMU02A01NGRL0008_K13
Library
Length 368
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_K13. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GATAAGATATCAAATTGAGCAGGTCTATACCAAGTGAGCTTTTAACGACGACGTTTGGCC
TCATCATATGAATGTGATATACCATCTTCTTGATTATTTCCATGCAAGTTGACCTCACTA
CTTGACTAACAAGTATTTGATATATCATGTTGTAAACAAAGTTTCACTGAAAGGCTTCTA
TACTGAAGGCTACATTAGCCTGTTCTTATCGATTGTAAATCTGAGAAGTTGTTATACTGA
GCAGAAGCCCATGTTTACTTGTAAAGAGCTCGTCCATAGAAAGATATGAGTGAGGCGAGT
TCTTCCATTGCCTGGAATTCTGGTATTGTTTGTTGACAGAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
■■Homology search results ■■ -
sp_hit_id P87169
Definition sp|P87169|MAD1_SCHPO Spindle assembly checkpoint component mad1 OS=Schizosaccharomyces pombe
Align length 54
Score (bit) 33.9
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945234|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K13, 5'
(339 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P87169|MAD1_SCHPO Spindle assembly checkpoint component mad1 ... 34 0.26
sp|P74297|SPKB_SYNY3 Serine/threonine-protein kinase B OS=Synech... 29 6.4
sp|Q6UJY2|S9A10_MOUSE Sodium/hydrogen exchanger 10 OS=Mus muscul... 29 6.4

>sp|P87169|MAD1_SCHPO Spindle assembly checkpoint component mad1
OS=Schizosaccharomyces pombe GN=mad1 PE=2 SV=1
Length = 689

Score = 33.9 bits (76), Expect = 0.26
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2

Query: 119 YLTNKYLIYHVVNKVSLKGFYTEGYISLFLSIVNLRSCYTEQKPMFTCKELVHR 280
Y N++L++ V K +++ F E I+L SI LR + + +C+ L HR
Sbjct: 475 YRKNQHLLFQVKEKTNIEAFLREQIITLESSIATLRQELAQVTEINSCRVLQHR 528


>sp|P74297|SPKB_SYNY3 Serine/threonine-protein kinase B
OS=Synechocystis sp. (strain PCC 6803) GN=spkB PE=1 SV=1
Length = 574

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2

Query: 86 LLDYFHAS*PHYLTNKYLIYHVVN-KVSLKGFYTEGYISLFLS 211
LLDYF YL +Y+ H ++ +V G +TEG + FL+
Sbjct: 103 LLDYFEDDHQFYLVQEYVKGHNLHQEVKKNGTFTEGSVKQFLT 145


>sp|Q6UJY2|S9A10_MOUSE Sodium/hydrogen exchanger 10 OS=Mus musculus
GN=Slc9a10 PE=1 SV=2
Length = 1175

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2

Query: 11 QIEQVYTK*AFNDDVWPHHMNVIYHLLDYFHAS*PHYLTNKYLIYHVVNKVSLKGFYTEG 190
++ Q++ F DDV +H+ +I+ +L YLI++V V + G +T
Sbjct: 249 KVIQLWMATIFGDDV--NHITLIFSVL--------------YLIFYVCELVGMSGIFTLA 292

Query: 191 YISLFLSIVNLR 226
I LFL+ + +
Sbjct: 293 TIGLFLNSTSFK 304


tr_hit_id Q8IKX1
Definition tr|Q8IKX1|Q8IKX1_PLAF7 Putative uncharacterized protein OS=Plasmodium falciparum (isolate 3D7)
Align length 113
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945234|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K13, 5'
(339 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8IKX1|Q8IKX1_PLAF7 Putative uncharacterized protein OS=Plasm... 36 1.1

>tr|Q8IKX1|Q8IKX1_PLAF7 Putative uncharacterized protein
OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0480 PE=4
SV=1
Length = 1653

Score = 35.8 bits (81), Expect = 1.1
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Frame = -3

Query: 331 KQYQNSRQWKNSPHSY------LSMDELFTSKHGLLLSITTSQIYNR*EQANVAFSIEAF 170
+++Q +R+ K + ++Y L D +F SK LLL + + YN + + +
Sbjct: 536 EKFQKTRKIKTNNNAYYDKKNSLPFDNMFYSKLRLLLCMQYKEKYNVVDNEMIKIDKYFY 595

Query: 169 Q*NFVYNMIYQILVSQVVRSTCMEIIKKMVYHIHMMRPNVVVKSSLGIDLLNL 11
F+ N+I +V+ + EIIKKM Y+ + + + + SL ++ + L
Sbjct: 596 FIEFINNIIKDGIVNFIDEFKTKEIIKKMQYNFKITNIDDLYEYSLLLNNIQL 648