DK945236 |
Clone id |
YMU02A01NGRL0008_K15 |
Library |
YMU02 |
Length |
582 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_K15. 5' end sequence. |
Accession |
DK945236 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
ATTATGGCACTTTATTTCTCCTACACAATGGTAGGAATGCTGAGATGGAAAGGTCTTTTA TGGATGGCTACTTTCATTTTTATCAGCATCTTCCTTTTGCTGTCTGTAACCTGGGATTTC AGCTCCAGCATCTCTAGACAAATGGGTTTCTTCCAGGAGACATTTCAGGGACCAGGATTT CTTGGTGATTCAGAGTTCTCTGATTTGAACGAGTCATCATTGGAAACAATTGAGAGATGT GACAGTCCTTTACGTGTATACATGTATGACATTCCTCGAAAGTTTAACCTGGGAATGATA AAGCAAGGTTCTAATGAAGAAAGGCCTTGGAGAGATGCAAAGGTTCCTTCTTGGCCAATG AATTCGGGATTGAAGAGGCAACATAGTGTTGAATATTGGATGATGCTGTCACTATTGAAT CAGGAGGCAGGAAAGAGCTTGGAAAGAGTAGCACTGAGAGTCGCGGATCCACTTGAAGCT GATTTATTTTTCATGCCCTTCTTTTCCTCTTTGAGTTTCAACAAGCACGGTGTCAACATG CTTGATCCCGAGACNAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P41695 |
Definition |
sp|P41695|BUB1_YEAST Checkpoint serine/threonine-protein kinase BUB1 OS=Saccharomyces cerevisiae |
Align length |
69 |
Score (bit) |
33.5 |
E-value |
0.72 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV69 |
Definition |
tr|A9NV69|A9NV69_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
107 |
Score (bit) |
130.0 |
E-value |
4.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945236|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_K15, 5' (555 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV69|A9NV69_PICSI Putative uncharacterized protein OS=Picea... 130 4e-29 tr|Q08AA5|Q08AA5_ARATH At1g67410 OS=Arabidopsis thaliana PE=2 SV=1 102 1e-20 tr|O64805|O64805_ARATH T1F15.13 protein (Fragment) OS=Arabidopsi... 102 1e-20 tr|A7QP83|A7QP83_VITVI Chromosome chr1 scaffold_136, whole genom... 102 2e-20 tr|A9TID6|A9TID6_PHYPA Predicted protein OS=Physcomitrella paten... 92 1e-17 tr|A9TSL6|A9TSL6_PHYPA Predicted protein OS=Physcomitrella paten... 91 5e-17 tr|B6UFM1|B6UFM1_MAIZE Exostosin-like OS=Zea mays PE=2 SV=1 83 9e-15 tr|Q8RZJ1|Q8RZJ1_ORYSJ cDNA clone:001-206-B06, full insert seque... 79 2e-13 tr|A9RL82|A9RL82_PHYPA Predicted protein OS=Physcomitrella paten... 74 4e-12 tr|A2WYG6|A2WYG6_ORYSI Putative uncharacterized protein OS=Oryza... 64 5e-09 tr|Q5BM99|Q5BM99_9ROSI Secondary cell wall-related glycosyltrans... 62 2e-08 tr|Q2RB29|Q2RB29_ORYSJ Secondary cell wall-related glycosyltrans... 61 4e-08 tr|Q0IUY7|Q0IUY7_ORYSJ Os11g0128000 protein OS=Oryza sativa subs... 61 4e-08 tr|B8BIU7|B8BIU7_ORYSI Putative uncharacterized protein OS=Oryza... 61 4e-08 tr|Q2QYC6|Q2QYC6_ORYSJ Os12g0124400 protein OS=Oryza sativa subs... 61 5e-08 tr|B8BLT2|B8BLT2_ORYSI Putative uncharacterized protein OS=Oryza... 61 5e-08 tr|A3CEI5|A3CEI5_ORYSJ Putative uncharacterized protein OS=Oryza... 61 5e-08 tr|A7QA17|A7QA17_VITVI Chromosome chr8 scaffold_68, whole genome... 60 6e-08 tr|A5AF70|A5AF70_VITVI Putative uncharacterized protein OS=Vitis... 60 8e-08 tr|B4FJA4|B4FJA4_MAIZE Putative uncharacterized protein OS=Zea m... 58 4e-07 tr|Q9S7E2|Q9S7E2_ARATH Putative uncharacterized protein F1M20.36... 57 5e-07 tr|Q93ZD5|Q93ZD5_ARATH At1g74680/F1M20_36 OS=Arabidopsis thalian... 57 5e-07 tr|B6U626|B6U626_MAIZE Secondary cell wall-related glycosyltrans... 57 5e-07 tr|Q10M35|Q10M35_ORYSJ Os03g0324700 protein OS=Oryza sativa subs... 57 7e-07 tr|A2XG66|A2XG66_ORYSI Putative uncharacterized protein OS=Oryza... 57 7e-07 tr|Q9SS65|Q9SS65_ARATH T12J13.7 protein (Putative uncharacterize... 56 1e-06 tr|B4FR58|B4FR58_MAIZE Putative uncharacterized protein OS=Zea m... 56 1e-06 tr|A7PDM2|A7PDM2_VITVI Chromosome chr17 scaffold_12, whole genom... 55 3e-06 tr|Q9M3D9|Q9M3D9_ARATH Putative uncharacterized protein F18N11.1... 54 4e-06 tr|A5BLW9|A5BLW9_VITVI Putative uncharacterized protein OS=Vitis... 54 4e-06
>tr|A9NV69|A9NV69_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 446
Score = 130 bits (328), Expect = 4e-29 Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Frame = +1
Query: 238 CDSPLRVYMYDIPRKFNLGMIKQGSNE-ERPWRDAKVPSWPMNSGLKRQHSVEYWMMLSL 414 C+SPL+VYMYD+PR+FNLGM+K+ S++ + PW +K+P WP SGLK+QHS+EYWMM+ L Sbjct: 62 CESPLKVYMYDLPRRFNLGMLKKNSSDLDLPWTSSKIPPWPQRSGLKKQHSIEYWMMVYL 121
Query: 415 LNQEAGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDPET 555 L Q G+ ER A+RVADP +AD N HG NM DPET Sbjct: 122 LGQHVGEEGERTAVRVADPDQADVFYVPFFASLSFNTHGQNMRDPET 168
>tr|Q08AA5|Q08AA5_ARATH At1g67410 OS=Arabidopsis thaliana PE=2 SV=1 Length = 430
Score = 102 bits (255), Expect = 1e-20 Identities = 52/103 (50%), Positives = 63/103 (61%) Frame = +1
Query: 247 PLRVYMYDIPRKFNLGMIKQGSNEERPWRDAKVPSWPMNSGLKRQHSVEYWMMLSLLNQE 426 PLRV+MYD+PRKFN+ M+ S++ P +PSWP SG+KRQHSVEYW+M SLLN Sbjct: 52 PLRVFMYDLPRKFNIAMMDPHSSDVEPITGKNLPSWPQTSGIKRQHSVEYWLMASLLN-- 109
Query: 427 AGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDPET 555 G E A+RV DP AD N HG NM DP+T Sbjct: 110 -GGEDENEAIRVFDPDLADVFYVPFFSSLSFNTHGKNMTDPDT 151
>tr|O64805|O64805_ARATH T1F15.13 protein (Fragment) OS=Arabidopsis thaliana GN=T1F15.13 PE=4 SV=1 Length = 440
Score = 102 bits (255), Expect = 1e-20 Identities = 52/103 (50%), Positives = 63/103 (61%) Frame = +1
Query: 247 PLRVYMYDIPRKFNLGMIKQGSNEERPWRDAKVPSWPMNSGLKRQHSVEYWMMLSLLNQE 426 PLRV+MYD+PRKFN+ M+ S++ P +PSWP SG+KRQHSVEYW+M SLLN Sbjct: 52 PLRVFMYDLPRKFNIAMMDPHSSDVEPITGKNLPSWPQTSGIKRQHSVEYWLMASLLN-- 109
Query: 427 AGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDPET 555 G E A+RV DP AD N HG NM DP+T Sbjct: 110 -GGEDENEAIRVFDPDLADVFYVPFFSSLSFNTHGKNMTDPDT 151
>tr|A7QP83|A7QP83_VITVI Chromosome chr1 scaffold_136, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002837001 PE=4 SV=1 Length = 400
Score = 102 bits (253), Expect = 2e-20 Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 1/108 (0%) Frame = +1
Query: 235 RCDSPLRVYMYDIPRKFNLGMIKQGSN-EERPWRDAKVPSWPMNSGLKRQHSVEYWMMLS 411 R PL VYMYD+PR+F++GM+++ S +E P +P WP NSGLK+QHSVEYWMM S Sbjct: 43 RFPCPLMVYMYDLPRRFHVGMLRRRSPADESPVTAENLPPWPSNSGLKKQHSVEYWMMAS 102
Query: 412 LLNQEAGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDPET 555 LL G + R A+RV DP AD N HG NM DP+T Sbjct: 103 LLYDGGGGNETREAVRVWDPEMADAFFVPFFSSLSFNTHGHNMTDPDT 150
>tr|A9TID6|A9TID6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108211 PE=4 SV=1 Length = 406
Score = 92.4 bits (228), Expect = 1e-17 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Frame = +1
Query: 196 FSDLNESSLETIER-CDSPLRVYMYDIPRKFNLG-MIKQGSNEERPWRDAKVPSWPMNSG 369 F LN+ S I R C PL+VYMYDIPRKFN G M NE+ PW + P W Sbjct: 12 FIMLNQKSPRPIARSCSHPLKVYMYDIPRKFNFGLMTMDNKNEDLPWGNHAAPPWSQQWE 71
Query: 370 LKRQHSVEYWMMLSLLNQEAGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDP 549 + +QHSVEYWM + LL+ K R A+RV DP +AD N +G M P Sbjct: 72 VNKQHSVEYWMTVYLLDGWDRKDGRRAAIRVRDPYQADVFFVPFFASLSFNNYGYGMEGP 131
>tr|A9TSL6|A9TSL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96602 PE=4 SV=1 Length = 460
Score = 90.5 bits (223), Expect = 5e-17 Identities = 41/98 (41%), Positives = 58/98 (59%) Frame = +1
Query: 247 PLRVYMYDIPRKFNLGMIKQGSNEERPWRDAKVPSWPMNSGLKRQHSVEYWMMLSLLNQE 426 PL++YMY++PRKFN+GM+K+ N+E PW + P W + +QHSVEYW+M+ LL+ Sbjct: 66 PLKIYMYELPRKFNMGMLKKDKNQEIPWTNHVAPPWKQKFEVNKQHSVEYWLMVYLLDGW 125
Query: 427 AGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNM 540 K + A+RV DP +AD N HG M Sbjct: 126 DRKDGKTAAVRVIDPEQADVFFVPFFSALSFNSHGHGM 163
>tr|B6UFM1|B6UFM1_MAIZE Exostosin-like OS=Zea mays PE=2 SV=1 Length = 427
Score = 83.2 bits (204), Expect = 9e-15 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 1/105 (0%) Frame = +1
Query: 244 SPLRVYMYDIPRKFNLGMIKQGSNEERPWRDAKVPSWPMNSG-LKRQHSVEYWMMLSLLN 420 +PLRV+MYD+P +F++ M+ + A P+WP ++G ++RQHSVEYWMM SL + Sbjct: 54 APLRVFMYDLPARFHVAMMGAAAG-------AGFPAWPPSAGGIRRQHSVEYWMMASLQD 106
Query: 421 QEAGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDPET 555 AG R A+RV DP AD N HG NM DP+T Sbjct: 107 GGAGPERGREAVRVRDPDAADAFFVPFFSSLSFNVHGRNMTDPDT 151
>tr|Q8RZJ1|Q8RZJ1_ORYSJ cDNA clone:001-206-B06, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1485_B09.5 PE=2 SV=1 Length = 437
Score = 78.6 bits (192), Expect = 2e-13 Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 6/109 (5%) Frame = +1
Query: 247 PLRVYMYDIPRKFNLGMIKQGSNEERPWRDAKVPSWPMNS-GLKRQHSVEYWMMLSLLNQ 423 PLRV+MYD+PR+F++GM+ + + P+WP ++ G++RQHSVEYWMM SL Sbjct: 61 PLRVFMYDLPRRFHVGMMDASA--------SGFPAWPPSAGGIRRQHSVEYWMMASLQGG 112
Query: 424 EA---GKSLE--RVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDPET 555 G S E R A+RV DP A+ N HG NM DPET Sbjct: 113 GGGGNGSSSEEGREAVRVTDPDAAEAFFVPFFSSLSFNVHGRNMTDPET 161
>tr|A9RL82|A9RL82_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_203566 PE=4 SV=1 Length = 378
Score = 74.3 bits (181), Expect = 4e-12 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Frame = +1
Query: 262 MYDIPRKFNLGMIKQGS-NEERPWRDAKVPSWPMNSGLKRQHSVEYWMMLSLLNQEAGKS 438 MY++PRK+NLG++++ + ++E PW +P W M + QHSVEYW+M+ LL+ K Sbjct: 1 MYELPRKYNLGLLQRDNPDQELPWTSDVIPPWKMEFEVNNQHSVEYWLMVYLLSGRDRKK 60
Query: 439 LERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDP 549 A+RV DP +A+ N G NM P Sbjct: 61 GNMAAVRVKDPEQAEVFFVPFFASLSFNSFGRNMAAP 97
>tr|A2WYG6|A2WYG6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04969 PE=4 SV=1 Length = 416
Score = 63.9 bits (154), Expect = 5e-09 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Frame = +1
Query: 247 PLRVYMYDIPRKFNLGMIKQGSNEERPWRDAKVPSWPMNS-GLKRQHSVEYWMMLSLLNQ 423 PLRV+MYD+PR+F++GM+ + + P+WP ++ G++RQHSVEYWMM SL Sbjct: 61 PLRVFMYDLPRRFHVGMMDASA--------SGFPAWPPSAGGIRRQHSVEYWMMASLQGG 112
Query: 424 EAGKSLERVALRVADPLEADXXXXXXXXXXXXNKHGVNMLDPET 555 G + N HG NM DPET Sbjct: 113 GGGGN----------------GSSSEEGRRRFNVHGRNMTDPET 140
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