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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945242
Clone id YMU02A01NGRL0008_K22
Library
Length 412
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_K22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GCGACTAAACCTATCTTCGTATCGAGATGCGGGTGGATCCTGTTGCTTCTGTGTCCCCCG
AAGCTAATTCTGTCACAAGAAAAGTGAAATCCTTGGGAAATTTAATATTCCCTAGTACCA
ATCCGTAAAAATGGAATGTAAATCCTGGGATTGTTGACTACTAAAAGTCTCTCTTATCAT
TCTATGGAGTTTCCATATATAGGTAAGGTCTTAAGTCCCACCTTTTCTATTTTCCCCTCT
CCAAATCAAGGGTGGGGCGGCTAAGAATATATTGGGTCTCGCCCCAATGCGGTACTCAAA
GAATAGTCTTACGGGATAGAGAAGAACGAGGAGTAGGAAGTGGCGACTTAGACTGATACA
CGGACGTGATTCGTCTCCTAGACTGATACACGGACGTGATTCGTCTCCTATT
■■Homology search results ■■ -
sp_hit_id P09310
Definition sp|P09310|IE62_VZVD Transcriptional transactivator IE62 OS=Varicella-zoster virus (strain Dumas)
Align length 57
Score (bit) 32.7
E-value 0.59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945242|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K22, 5'
         (412 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P09310|IE62_VZVD Transcriptional transactivator IE62 OS=Varic...    33   0.59 

>sp|P09310|IE62_VZVD Transcriptional transactivator IE62
           OS=Varicella-zoster virus (strain Dumas) GN=62 PE=1 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560
tr_hit_id Q9J3N0
Definition tr|Q9J3N0|Q9J3N0_HHV3 ORF62 OS=Human herpesvirus 3
Align length 57
Score (bit) 32.7
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945242|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_K22, 5'
         (412 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9J3N0|Q9J3N0_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1           33   9.3  
tr|Q9DWX9|Q9DWX9_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1           33   9.3  
tr|Q9DK02|Q9DK02_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1           33   9.3  
tr|Q99BW7|Q99BW7_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1           33   9.3  
tr|Q99BU9|Q99BU9_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1           33   9.3  
tr|Q993S8|Q993S8_HHV3 ORF62 OS=Human herpesvirus 3 VZV-32 PE=4 SV=1    33   9.3  
tr|Q98WV6|Q98WV6_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1           33   9.3  
tr|Q98WV5|Q98WV5_HHV3 ORF62 (Transcription regulator) (Transcrip...    33   9.3  
tr|Q98WV4|Q98WV4_HHV3 ORF62 (Transcriptional regulator) (Immedia...    33   9.3  
tr|Q8AZM1|Q8AZM1_HHV3 IE62 transactivator OS=Human herpesvirus 3...    33   9.3  
tr|Q80AC4|Q80AC4_HHV3 IE62 (Fragment) OS=Human herpesvirus 3 PE=...    33   9.3  
tr|Q80AC2|Q80AC2_HHV3 IE62 (Fragment) OS=Human herpesvirus 3 PE=...    33   9.3  
tr|Q80AC0|Q80AC0_HHV3 IE62 (Fragment) OS=Human herpesvirus 3 PE=...    33   9.3  
tr|Q80AB9|Q80AB9_HHV3 IE62 (Fragment) OS=Human herpesvirus 3 PE=...    33   9.3  
tr|Q775H6|Q775H6_VZVE ORF62 OS=Varicella-zoster virus (strain El...    33   9.3  
tr|Q6X674|Q6X674_HHV3 IE62 (Transcription regulator) (Putative u...    33   9.3  
tr|Q4JQR3|Q4JQR3_HHV3 ORF62 OS=Human herpesvirus 3 GN=ORF62 PE=4...    33   9.3  
tr|Q4JQQ4|Q4JQQ4_HHV3 ORF71 OS=Human herpesvirus 3 GN=ORF71 PE=4...    33   9.3  
tr|Q0Q9H0|Q0Q9H0_HHV3 Transcriptional regulator OS=Human herpesv...    33   9.3  
tr|Q0Q809|Q0Q809_HHV3 Transcriptional regulator OS=Human herpesv...    33   9.3  
tr|A6XEF1|A6XEF1_HHV3 Transcription regulator (Putative uncharac...    33   9.3  

>tr|Q9J3N0|Q9J3N0_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q9DWX9|Q9DWX9_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q9DK02|Q9DK02_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q99BW7|Q99BW7_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q99BU9|Q99BU9_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q993S8|Q993S8_HHV3 ORF62 OS=Human herpesvirus 3 VZV-32 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q98WV6|Q98WV6_HHV3 ORF62 OS=Human herpesvirus 3 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q98WV5|Q98WV5_HHV3 ORF62 (Transcription regulator)
           (Transcriptional regulator) OS=Human herpesvirus 3
           GN=HHV3M2gp63 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q98WV4|Q98WV4_HHV3 ORF62 (Transcriptional regulator)
           (Immediate-early transcriptional transactivator)
           OS=Human herpesvirus 3 GN=HHV3gp63 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560


>tr|Q8AZM1|Q8AZM1_HHV3 IE62 transactivator OS=Human herpesvirus 3
           GN=ORF62 PE=4 SV=1
          Length = 1310

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  RIEMRVDPVASVSPEANSVTRKVKSLGNLIF-PSTNP*KWNVNPGIVDY*KSLLSFY 185
           R E   +PV    PE     R+ ++L NLI+ P  +P  W  NP +     +L  FY
Sbjct: 504 RYEASTEPVPLYVPELGDPARQYRALINLIYCPDRDPIAWLQNPKLTGVNSALNQFY 560