DK945253 |
Clone id |
YMU02A01NGRL0008_L12 |
Library |
YMU02 |
Length |
478 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_L12. 5' end sequence. |
Accession |
DK945253 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL168Contig1 |
Sequence |
GATGGCTTTGATTAAGAAGCTTCGCAAGGCGAAAAGGGAAGCACCTGCGGGGGAGAAGCC GGAGCCTGTGAGAACTCACTTAAGGAACATGATCATTGTGCCTGAGATGATCGGTAGCAT TATTGGCGTGTATAATGGAAAGACATTCAACCAAGTTGAAATCAAGCCTGAACTGATTGG CCACTACTTGGGAGAGTTTTCCATCAGCTACAAGCCTGTGAAGCATGGAAGGCCCGGCAT TGGTGCCACCCACTCTTCTCGGTTTATTCCACTGAAGTAGTTTCTGATGGTGGCTATGAA TTGTGGAGGCTTGGAGAATTATTGACACCTTCTGCTAATCAAGACTTAAGAGCGAACTTT TTTGTCAACAATGTTCTCTTCAAGGTGTCATTTCTTGTTGGATTTTGAACATGTAACCTT AGCAATTGACAGAGGGGTTAAAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FY64 |
Definition |
sp|Q9FY64|RS154_ARATH 40S ribosomal protein S15-4 OS=Arabidopsis thaliana |
Align length |
92 |
Score (bit) |
184.0 |
E-value |
1.0e-46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SLM1 |
Definition |
tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
92 |
Score (bit) |
184.0 |
E-value |
1.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945253|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_L12, 5' (434 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomit... 184 1e-45 tr|A9S4A4|A9S4A4_PHYPA Predicted protein OS=Physcomitrella paten... 184 1e-45 tr|A8MQ96|A8MQ96_ARATH Uncharacterized protein At5g09510.2 OS=Ar... 184 1e-45 tr|A9NK76|A9NK76_PICSI Putative uncharacterized protein OS=Picea... 184 2e-45 tr|Q8W538|Q8W538_9FABA Ribosomal S15 protein (Fragment) OS=Retam... 183 4e-45 tr|A9TG45|A9TG45_PHYPA Predicted protein OS=Physcomitrella paten... 183 4e-45 tr|A7NX09|A7NX09_VITVI Chromosome chr5 scaffold_2, whole genome ... 183 4e-45 tr|A7PUN2|A7PUN2_VITVI Chromosome chr7 scaffold_31, whole genome... 182 6e-45 tr|Q851P5|Q851P5_ORYSJ Os03g0798600 protein OS=Oryza sativa subs... 182 7e-45 tr|Q0D852|Q0D852_ORYSJ Os07g0184300 protein OS=Oryza sativa subs... 182 7e-45 tr|A6MZB5|A6MZB5_ORYSI 40S ribosomal protein S15 OS=Oryza sativa... 182 7e-45 tr|A3BH94|A3BH94_ORYSJ Putative uncharacterized protein OS=Oryza... 182 7e-45 tr|A2YIV1|A2YIV1_ORYSI Putative uncharacterized protein OS=Oryza... 182 7e-45 tr|B3TLS1|B3TLS1_ELAGV 40S ribosomal protein S15 OS=Elaeis guine... 182 9e-45 tr|B6SII7|B6SII7_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 181 2e-44 tr|A9PCZ0|A9PCZ0_POPTR Putative uncharacterized protein OS=Popul... 180 3e-44 tr|A9PAQ1|A9PAQ1_POPTR Putative uncharacterized protein OS=Popul... 180 3e-44 tr|A9P8I7|A9P8I7_POPTR Putative uncharacterized protein OS=Popul... 180 3e-44 tr|A9NNI7|A9NNI7_PICSI Putative uncharacterized protein OS=Picea... 180 4e-44 tr|B6UGP9|B6UGP9_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 179 5e-44 tr|B6UDY1|B6UDY1_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 179 5e-44 tr|B6T6W2|B6T6W2_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 179 5e-44 tr|B6T379|B6T379_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 179 5e-44 tr|B6SII4|B6SII4_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 177 2e-43 tr|Q2V4R0|Q2V4R0_ARATH Uncharacterized protein At1g04270.2 OS=Ar... 176 4e-43 tr|A9T4N2|A9T4N2_PHYPA Predicted protein OS=Physcomitrella paten... 176 4e-43 tr|Q2XTB6|Q2XTB6_SOLTU 40S ribosomal protein S15-like OS=Solanum... 176 7e-43 tr|Q2V999|Q2V999_SOLTU 40S ribosomal protein S15-like OS=Solanum... 176 7e-43 tr|Q9SC33|Q9SC33_PEA Ribosomal protein S15 (Fragment) OS=Pisum s... 174 2e-42 tr|A6YPN5|A6YPN5_TRIIF Ribosomal protein S15e OS=Triatoma infest... 174 2e-42
>tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131980 PE=3 SV=1 Length = 146
Score = 184 bits (468), Expect = 1e-45 Identities = 89/92 (96%), Positives = 91/92 (98%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPE+IG Sbjct: 55 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 114
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 115 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 146
>tr|A9S4A4|A9S4A4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181118 PE=3 SV=1 Length = 150
Score = 184 bits (468), Expect = 1e-45 Identities = 89/92 (96%), Positives = 91/92 (98%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPE+IG Sbjct: 59 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 118
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 119 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 150
>tr|A8MQ96|A8MQ96_ARATH Uncharacterized protein At5g09510.2 OS=Arabidopsis thaliana GN=At5g09510 PE=3 SV=1 Length = 118
Score = 184 bits (468), Expect = 1e-45 Identities = 89/92 (96%), Positives = 91/92 (98%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE+IG Sbjct: 27 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 86
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPG+GATHSSRFIPLK Sbjct: 87 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 118
>tr|A9NK76|A9NK76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 151
Score = 184 bits (466), Expect = 2e-45 Identities = 89/92 (96%), Positives = 91/92 (98%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAP+GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE+IG Sbjct: 60 MALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 119
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 120 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
>tr|Q8W538|Q8W538_9FABA Ribosomal S15 protein (Fragment) OS=Retama raetam GN=S15 PE=2 SV=1 Length = 139
Score = 183 bits (464), Expect = 4e-45 Identities = 89/92 (96%), Positives = 90/92 (97%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE+IG Sbjct: 48 MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 107
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 108 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 139
>tr|A9TG45|A9TG45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108089 PE=3 SV=1 Length = 150
Score = 183 bits (464), Expect = 4e-45 Identities = 88/92 (95%), Positives = 90/92 (97%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPE+IG Sbjct: 59 MALIKKLRKAKREAPTGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 118
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 119 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 150
>tr|A7NX09|A7NX09_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020133001 PE=3 SV=1 Length = 185
Score = 183 bits (464), Expect = 4e-45 Identities = 89/92 (96%), Positives = 90/92 (97%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE+IG Sbjct: 94 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 153
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 154 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 185
>tr|A7PUN2|A7PUN2_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023867001 PE=3 SV=1 Length = 118
Score = 182 bits (463), Expect = 6e-45 Identities = 88/92 (95%), Positives = 90/92 (97%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPE+IG Sbjct: 27 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIG 86
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 87 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 118
>tr|Q851P5|Q851P5_ORYSJ Os03g0798600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0052F07.28 PE=2 SV=1 Length = 154
Score = 182 bits (462), Expect = 7e-45 Identities = 87/92 (94%), Positives = 91/92 (98%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAK++APAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPE+IG Sbjct: 63 MALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIG 122
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 123 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
>tr|Q0D852|Q0D852_ORYSJ Os07g0184300 protein OS=Oryza sativa subsp. japonica GN=Os07g0184300 PE=3 SV=1 Length = 118
Score = 182 bits (462), Expect = 7e-45 Identities = 87/92 (94%), Positives = 91/92 (98%) Frame = +2
Query: 2 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPELIG 181 MALIKKLRKAK++APAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPE+IG Sbjct: 27 MALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIG 86
Query: 182 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 277 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 87 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 118
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