BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945257|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_L16, 5'
         (124 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3SYW2|CO2_BOVIN Complement C2 OS=Bos taurus GN=C2 PE=2 SV=1        30   4.9  

>sp|Q3SYW2|CO2_BOVIN Complement C2 OS=Bos taurus GN=C2 PE=2 SV=1
          Length = 750

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +3

Query: 3   ESDEGFVLLGEAVECCTP----DGDSPVAGSTASSRSNP 107
           E ++GF L G AV  C P    DG++ V  + AS   NP
Sbjct: 116 ECEDGFTLRGSAVRQCRPNGMWDGETAVCDNGASHCPNP 154

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945257|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_L16, 5'
         (124 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7R8H6|A7R8H6_VITVI Chromosome undetermined scaffold_2564, wh...    48   2e-04
tr|A7R075|A7R075_VITVI Chromosome undetermined scaffold_298, who...    47   5e-04
tr|A6H5B3|A6H5B3_VIGUN Putative ribosomal protein S3 (Fragment) ...    46   8e-04
tr|A6H595|A6H595_VIGUN Putative 23S ribosomal RNA (Fragment) OS=...    46   8e-04
tr|A6H594|A6H594_VIGUN Putative 23S ribosomal RNA (Fragment) OS=...    46   8e-04
tr|A6H593|A6H593_VIGUN Putative 23S ribosomal RNA (Fragment) OS=...    46   8e-04
tr|A4QMB9|A4QMB9_PINKO ORF124 OS=Pinus koraiensis PE=4 SV=1            33   5.4  

>tr|A7R8H6|A7R8H6_VITVI Chromosome undetermined scaffold_2564, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00011927001 PE=4 SV=1
          Length = 60

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = +3

Query: 3   ESDEGFVLLGEAVECCTPDGDSPVAGSTASSRSNPSSMGH 122
           ES++   LL EA ECCT DG+SPVA S  S  S+ SSMGH
Sbjct: 13  ESNKSVTLLDEAEECCTLDGESPVAESITSLCSDQSSMGH 52


>tr|A7R075|A7R075_VITVI Chromosome undetermined scaffold_298, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00010999001 PE=4 SV=1
          Length = 73

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = +3

Query: 3   ESDEGFVLLGEAVECCTPDGDSPVAGSTASSRSNPSSMGH 122
           ES++   LL EA ECCT DG+SPVA S  S  S+ +SMGH
Sbjct: 13  ESNKSVTLLDEAEECCTLDGESPVAESITSLCSDQNSMGH 52


>tr|A6H5B3|A6H5B3_VIGUN Putative ribosomal protein S3 (Fragment)
           OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
          Length = 79

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3

Query: 39  VECCTPDGDSPVAGSTASSRSNPSSMGH 122
           +ECCT DG+SPVA S  S RS+PSSMGH
Sbjct: 23  IECCTLDGESPVAESITSLRSDPSSMGH 50


>tr|A6H595|A6H595_VIGUN Putative 23S ribosomal RNA (Fragment)
           OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
          Length = 87

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3

Query: 39  VECCTPDGDSPVAGSTASSRSNPSSMGH 122
           +ECCT DG+SPVA S  S RS+PSSMGH
Sbjct: 29  IECCTLDGESPVAESITSLRSDPSSMGH 56


>tr|A6H594|A6H594_VIGUN Putative 23S ribosomal RNA (Fragment)
           OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
          Length = 90

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3

Query: 39  VECCTPDGDSPVAGSTASSRSNPSSMGH 122
           +ECCT DG+SPVA S  S RS+PSSMGH
Sbjct: 32  IECCTLDGESPVAESITSLRSDPSSMGH 59


>tr|A6H593|A6H593_VIGUN Putative 23S ribosomal RNA (Fragment)
           OS=Vigna unguiculata GN=rrn23 PE=2 SV=1
          Length = 85

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3

Query: 39  VECCTPDGDSPVAGSTASSRSNPSSMGH 122
           +ECCT DG+SPVA S  S RS+PSSMGH
Sbjct: 27  IECCTLDGESPVAESITSLRSDPSSMGH 54


>tr|A4QMB9|A4QMB9_PINKO ORF124 OS=Pinus koraiensis PE=4 SV=1
          Length = 124

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -1

Query: 115 MLLGLERELAVLPATGLSPSGVQ 47
           MLLGLER+  +L ATGLSPS VQ
Sbjct: 1   MLLGLERKPMMLSATGLSPSRVQ 23