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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945263
Clone id YMU02A01NGRL0008_M02
Library
Length 605
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_M02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CAGATGGAGATGGAGGCATGCGTGAGAGGAATGCAGAGCATGATGGAGGAGAAGGTGTTG
CACGTGCAAATGCACGTCGGCACTGCACATCTGAGGGAAGTGATGTTGCTCCCCGGATGG
ATGTTGATGGTGAGGCAGATGAGGTTGAATTGACGCCTTCTCCAGCTGAGAATGTACATG
GGGAGGCCTTAGCACGCACTATGAAGCGCCCTCGTCTTGTTTGGACGCCCGAGTTGCACA
AGAGGTTTGTGGATGCGGTCACTCACCTCGGCGTGCGGACGGCTGTACCAAAAACCATAA
TGCAGCTTATGAATGTGGAAGGCTTAACAAGGGAGAATGTAGCGAGCCATCTGCAGAAGT
ATCGGCTATATTTGAAGAGGGTGCAACAAGGGGGTCCGACAGCATCGGACCACCTCTTCT
TGATGACTCCGTTACCTCCAGCAAGTGCAAGATTTCAGCCAGGGTTCGTGCAGATGTAAA
TCAGGTACCGCATTTGCCGTTCACTAGTCCTGTTTCGATCAAAAGAGGGCACATAGCTGG
AATGCTGCCAGGGCCTTTACCTCCTATGGATCCATACTCTTACAATGTATATGCAAGACC
TACCC
■■Homology search results ■■ -
sp_hit_id Q9FGT7
Definition sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
Align length 120
Score (bit) 98.2
E-value 3.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945263|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_M02, 5'
         (605 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=...    98   3e-20
sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Ar...    94   5e-19
sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Ar...    94   7e-19
sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=...    89   2e-17
sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=...    88   4e-17
sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=...    87   5e-17
sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ...    85   3e-16
sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=...    80   6e-15
sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ...    79   2e-14
sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR...    74   4e-13
sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ...    68   3e-11
sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-...    68   3e-11
sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ...    64   8e-10
sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At...    60   9e-09
sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoid...    39   0.021
sp|O77755|INHA_TRIVU Inhibin alpha chain OS=Trichosurus vulpecul...    34   0.51 
sp|Q5Z8N6|U496B_ORYSJ Putative UPF0496 protein 2 OS=Oryza sativa...    34   0.66 
sp|A2YH25|U496B_ORYSI Putative UPF0496 protein 2 OS=Oryza sativa...    34   0.66 
sp|Q68DN1|CB016_HUMAN Uncharacterized protein C2orf16 OS=Homo sa...    33   1.1  
sp|Q7VRY3|HEM1_BORPE Glutamyl-tRNA reductase OS=Bordetella pertu...    33   1.5  
sp|Q7WCE4|HEM1_BORPA Glutamyl-tRNA reductase OS=Bordetella parap...    33   1.5  
sp|Q7WQF0|HEM1_BORBR Glutamyl-tRNA reductase OS=Bordetella bronc...    33   1.5  
sp|Q9UPV7|K1045_HUMAN Protein KIAA1045 OS=Homo sapiens GN=KIAA10...    32   1.9  
sp|P16794|UL53_HCMVA Protein UL53 OS=Human cytomegalovirus (stra...    32   2.5  
sp|Q9GQQ0|SPIN_DROME Protein spinster OS=Drosophila melanogaster...    32   2.5  
sp|Q5R4R7|K1045_PONAB Protein KIAA1045 homolog OS=Pongo abelii P...    32   2.5  
sp|Q1XH10|DLN1_HUMAN Protein DLN-1 OS=Homo sapiens GN=C10orf140 ...    31   4.3  
sp|A4X4I2|RNH2_SALTO Ribonuclease HII OS=Salinispora tropica (st...    31   5.6  
sp|A8M684|RNH2_SALAI Ribonuclease HII OS=Salinispora arenicola (...    31   5.6  
sp|Q8WW36|ZCH13_HUMAN Zinc finger CCHC domain-containing protein...    30   7.3  

>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18
           OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2
          Length = 635

 Score = 98.2 bits (243), Expect = 3e-20
 Identities = 54/120 (45%), Positives = 74/120 (61%)
 Frame = +3

Query: 33  AEHDGGEGVARANARRHCTSEGSDVAPRMDVDGEADEVELTPSPAENVHGEALARTMKRP 212
           +E D     +R    +   S   D + R + DGE  E +          G+  + T K+P
Sbjct: 147 SESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQD----------GDG-SGTRKKP 195

Query: 213 RLVWTPELHKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQQG 392
           R+VW+ ELH++FV AV  LG+  AVPK I+ LM++EGLTRENVASHLQKYRLYLK++ +G
Sbjct: 196 RVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDEG 255


>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1
           OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2
          Length = 690

 Score = 94.0 bits (232), Expect = 5e-19
 Identities = 51/123 (41%), Positives = 71/123 (57%)
 Frame = +3

Query: 15  GMRERNAEHDGGEGVARANARRHCTSEGSDVAPRMDVDGEADEVELTPSPAENVHGEALA 194
           G R++     GG G A +          S V    +    + + +      +    +  A
Sbjct: 173 GERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDA 232

Query: 195 RTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYL 374
             +K+PR+VW+ ELH++FV AV  LGV  AVPK I++LMNV GLTRENVASHLQKYR+YL
Sbjct: 233 SNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYL 292

Query: 375 KRV 383
           +R+
Sbjct: 293 RRL 295


>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2
           OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1
          Length = 664

 Score = 93.6 bits (231), Expect = 7e-19
 Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
 Frame = +3

Query: 12  GGMRERNAEHDGGEGVARANARRHCTS--EGSDVAPRM----DVDGEADEVELTPSPAEN 173
           GG R+R  +H       R +A  + +S  EG+  + R     +VD + D+ E + S    
Sbjct: 165 GGDRDRQQQH-------REDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSS---- 213

Query: 174 VHGEALARTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHL 353
                    +K+PR+VW+ ELH++FV AV  LGV  AVPK I+++MNV GLTRENVASHL
Sbjct: 214 ---------LKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHL 264

Query: 354 QKYRLYLKRV 383
           QKYR+YL+R+
Sbjct: 265 QKYRIYLRRL 274


>sp|P62598|ARR12_ARATH Two-component response regulator ARR12
           OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1
          Length = 596

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 50/101 (49%), Positives = 61/101 (60%), Gaps = 14/101 (13%)
 Frame = +3

Query: 204 KRPRLVWTPELHKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRV 383
           K+ R+VWT ELHK+FV AV  LG   A+PK I+ LMNVE LTRENVASHLQK+RLYLKR+
Sbjct: 194 KKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRI 253

Query: 384 ----QQGGPTASDHLFLM----------TPLPPASARFQPG 464
                Q    A+  L  M           P+P  S ++  G
Sbjct: 254 SGVANQQAIMANSELHFMQMNGLDGFHHRPIPVGSGQYHGG 294


>sp|O49397|ARR10_ARATH Two-component response regulator ARR10
           OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1
          Length = 552

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
 Frame = +3

Query: 204 KRPRLVWTPELHKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRV 383
           K+PR++WT ELH +F+ AV HLGV  AVPK I+ LMNV+ LTRENVASHLQK+R+ LK+V
Sbjct: 182 KKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKV 241

Query: 384 -----QQGGPTASDHLFL 422
                QQ    A D  F+
Sbjct: 242 SDDAIQQANRAAIDSHFM 259


>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14
           OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2
          Length = 382

 Score = 87.4 bits (215), Expect = 5e-17
 Identities = 46/99 (46%), Positives = 65/99 (65%)
 Frame = +3

Query: 114 RMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPK 293
           +  VD + +E +L   P  +          K+ R+VW+ ELH++FV+AV  LG+  AVPK
Sbjct: 179 KRSVDRDDNEDDLLLDPGNS----------KKSRVVWSIELHQQFVNAVNKLGIDKAVPK 228

Query: 294 TIMQLMNVEGLTRENVASHLQKYRLYLKRVQQGGPTASD 410
            I++LMNV GL+RENVASHLQK+RLYLKR+      ++D
Sbjct: 229 RILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQSND 267


>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator
           ARR21 OS=Arabidopsis thaliana GN=ARR21 PE=2 SV=2
          Length = 592

 Score = 84.7 bits (208), Expect = 3e-16
 Identities = 43/111 (38%), Positives = 70/111 (63%)
 Frame = +3

Query: 63  RANARRHCTSEGSDVAPRMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHK 242
           ++++R   ++ GS V+     DG     +  P+   +  GE++++  K+ ++ WT  LH 
Sbjct: 178 KSDSRTVNSTNGSCVS----TDGSRKNRKRKPNGGPSDDGESMSQPAKKKKIQWTDSLHD 233

Query: 243 RFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQQGG 395
            F+ A+ H+G+  AVPK I+  M+V  LTRENVASHLQKYR++L+RV + G
Sbjct: 234 LFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVAEQG 284


>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11
           OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1
          Length = 521

 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
 Frame = +3

Query: 39  HDGGEGVARANARRHCTSEGSDVA---PRMDVDGEADEVELTPSPAENVHGEALARTMKR 209
           ++GG          H    G DV+    R D D E   ++    P+ +        + K+
Sbjct: 142 YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSS--------SSKK 193

Query: 210 PRLVWTPELHKRFVDAVTHLGV-RTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQ 386
            R+VW+ ELH +FV+AV  +G    A PK I+ LMNV  LTRENVASHLQKYRLYL R++
Sbjct: 194 ARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLE 253

Query: 387 QG 392
           +G
Sbjct: 254 KG 255


>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator
           ARR13 OS=Arabidopsis thaliana GN=ARR13 PE=2 SV=2
          Length = 572

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
 Frame = +3

Query: 75  RRHCTSEG------SDVAPRMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPEL 236
           +++C+S+       S     +  +G     +  P    +  GE+L++  K+ ++ WT  L
Sbjct: 175 KKNCSSKSDTRTVNSTNVSHVSTNGSRKNRKRKPKGGPSDDGESLSQPPKKKKIWWTNPL 234

Query: 237 HKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQQGG 395
              F+ A+ H+G    VPK I+ +MNV  LTRENVASHLQKYRL++KRV   G
Sbjct: 235 QDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRVVHQG 287


>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2
           OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2
          Length = 535

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = +3

Query: 99  SDVAPRMDVDGEADEVELT--PSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLG 272
           S+    +D+  + DE +     S  +NV G   +R     ++ WTPELHK+FV AV  LG
Sbjct: 262 SEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRK----KVDWTPELHKKFVQAVEQLG 317

Query: 273 VRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRV 383
           V  A+P  I++LM V  LTR NVASHLQK+R + K +
Sbjct: 318 VDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNI 354
tr_hit_id A7NYW2
Definition tr|A7NYW2|A7NYW2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 111
Score (bit) 144.0
E-value 4.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945263|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_M02, 5'
         (605 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NYW2|A7NYW2_VITVI Chromosome chr6 scaffold_3, whole genome ...   144   4e-33
tr|A5BDT9|A5BDT9_VITVI Putative uncharacterized protein OS=Vitis...   144   4e-33
tr|A9NUS3|A9NUS3_PICSI Putative uncharacterized protein OS=Picea...   144   5e-33
tr|Q9SNB4|Q9SNB4_ARATH Putative uncharacterized protein F12A12.1...   140   4e-32
tr|Q4H2B3|Q4H2B3_NICBE NbPCL1 protein OS=Nicotiana benthamiana G...   140   4e-32
tr|A9SQM1|A9SQM1_PHYPA Predicted protein (Fragment) OS=Physcomit...   140   4e-32
tr|A9RUA4|A9RUA4_PHYPA Predicted protein (Fragment) OS=Physcomit...   140   6e-32
tr|A9RUA1|A9RUA1_PHYPA Predicted protein (Fragment) OS=Physcomit...   140   6e-32
tr|A2Q6F5|A2Q6F5_MEDTR Homeodomain-related OS=Medicago truncatul...   138   3e-31
tr|Q9FF65|Q9FF65_ARATH Similarity to unknown protein (At5g05090)...   137   4e-31
tr|Q8LFK7|Q8LFK7_ARATH Putative uncharacterized protein OS=Arabi...   137   4e-31
tr|Q9LTH4|Q9LTH4_ARATH Similarity to two-component response regu...   137   6e-31
tr|Q8LA15|Q8LA15_ARATH ARR1 protein-like OS=Arabidopsis thaliana...   137   6e-31
tr|Q4H2B1|Q4H2B1_SOLTU StPCL1 protein OS=Solanum tuberosum GN=St...   136   1e-30
tr|Q9SG82|Q9SG82_ARATH T7M13.16 protein OS=Arabidopsis thaliana ...   135   2e-30
tr|A9RTK9|A9RTK9_PHYPA Predicted protein (Fragment) OS=Physcomit...   134   5e-30
tr|A2WZK4|A2WZK4_ORYSI Putative uncharacterized protein OS=Oryza...   133   7e-30
tr|Q94DH3|Q94DH3_ORYSJ Induced protein MgI1 (Putative uncharacte...   133   9e-30
tr|Q6PT61|Q6PT61_ORYSJ Induced protein MgI1 OS=Oryza sativa subs...   132   1e-29
tr|A7PTB5|A7PTB5_VITVI Chromosome chr8 scaffold_29, whole genome...   129   2e-28
tr|A5AMU0|A5AMU0_VITVI Putative uncharacterized protein OS=Vitis...   129   2e-28
tr|B8A1T5|B8A1T5_MAIZE Putative uncharacterized protein OS=Zea m...   128   2e-28
tr|O22210|O22210_ARATH Putative uncharacterized protein At2g4097...   127   5e-28
tr|B6SQE7|B6SQE7_MAIZE ARR1 protein-like OS=Zea mays PE=2 SV=1        127   7e-28
tr|Q6AU85|Q6AU85_ORYSJ Os05g0412000 protein OS=Oryza sativa subs...   125   2e-27
tr|A2Y4N1|A2Y4N1_ORYSI Putative uncharacterized protein OS=Oryza...   125   2e-27
tr|Q4H2A8|Q4H2A8_SORBI SbPCL1 protein (Fragment) OS=Sorghum bico...   113   1e-23
tr|Q5YJN1|Q5YJN1_HYAOR Cytokinin response regulator 1 protein (F...   107   4e-22
tr|Q0JHT1|Q0JHT1_ORYSJ Os01g0844900 protein OS=Oryza sativa subs...   103   6e-21
tr|B8AC28|B8AC28_ORYSI Putative uncharacterized protein OS=Oryza...   103   6e-21

>tr|A7NYW2|A7NYW2_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024277001
           PE=4 SV=1
          Length = 311

 Score =  144 bits (363), Expect = 4e-33
 Identities = 74/111 (66%), Positives = 86/111 (77%), Gaps = 3/111 (2%)
 Frame = +3

Query: 114 RMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPK 293
           ++D   EAD    T    EN + +  ART+KRPRLVWTP+LHKRFVD V HLG++ AVPK
Sbjct: 120 KVDCAEEADSAMRT----ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPK 175

Query: 294 TIMQLMNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTASDHLFLMTPLP 437
           TIMQLMNVEGLTRENVASHLQKYRLYLKR+Q     GP++SDHLF  TP+P
Sbjct: 176 TIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVP 226


>tr|A5BDT9|A5BDT9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_006762 PE=4 SV=1
          Length = 362

 Score =  144 bits (363), Expect = 4e-33
 Identities = 74/111 (66%), Positives = 86/111 (77%), Gaps = 3/111 (2%)
 Frame = +3

Query: 114 RMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPK 293
           ++D   EAD    T    EN + +  ART+KRPRLVWTP+LHKRFVD V HLG++ AVPK
Sbjct: 171 KVDCAEEADSAMRT----ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPK 226

Query: 294 TIMQLMNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTASDHLFLMTPLP 437
           TIMQLMNVEGLTRENVASHLQKYRLYLKR+Q     GP++SDHLF  TP+P
Sbjct: 227 TIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVP 277


>tr|A9NUS3|A9NUS3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 274

 Score =  144 bits (362), Expect = 5e-33
 Identities = 76/119 (63%), Positives = 90/119 (75%), Gaps = 3/119 (2%)
 Frame = +3

Query: 96  GSDVAPRMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGV 275
           G +   R++++ E   V       ENV GE  ART+KRPRLVWTP+LHKRFVDAV HLG+
Sbjct: 66  GVEPPKRIELEEEESSVG---GVTENV-GEEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 121

Query: 276 RTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTASDHLFLMTPLPPA 443
           + AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR+Q     GP++ D LF  TP+PP+
Sbjct: 122 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSSEGPSSCDQLFASTPVPPS 180


>tr|Q9SNB4|Q9SNB4_ARATH Putative uncharacterized protein F12A12.160
           (Putative uncharacterized protein At3g46640) (PHYTOCLOCK
           1) (At3g46640) OS=Arabidopsis thaliana GN=F12A12.160
           PE=2 SV=1
          Length = 323

 Score =  140 bits (354), Expect = 4e-32
 Identities = 77/134 (57%), Positives = 92/134 (68%), Gaps = 14/134 (10%)
 Frame = +3

Query: 87  TSEGSDVAPRMDVDGEADE-----------VELTPSPAENVHGEALARTMKRPRLVWTPE 233
           +S GSD   +   +G+ D+            E   S  E++ G    +T+KRPRLVWTP+
Sbjct: 97  SSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSG----KTLKRPRLVWTPQ 152

Query: 234 LHKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTA 404
           LHKRFVD V HLG++ AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR+Q     GP+A
Sbjct: 153 LHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPSA 212

Query: 405 SDHLFLMTPLPPAS 446
           SD LF  TP+PP S
Sbjct: 213 SDKLFSSTPVPPQS 226


>tr|Q4H2B3|Q4H2B3_NICBE NbPCL1 protein OS=Nicotiana benthamiana
           GN=NbPCL1 PE=2 SV=1
          Length = 312

 Score =  140 bits (354), Expect = 4e-32
 Identities = 76/127 (59%), Positives = 89/127 (70%), Gaps = 10/127 (7%)
 Frame = +3

Query: 87  TSEGSDVAPRMDVDGEADEVELTPSPAENVHG------EALARTM-KRPRLVWTPELHKR 245
           T  GSD      +D E  E +      EN  G      ++ ++T+ KRPRLVWTP+LHKR
Sbjct: 90  TEHGSDPRKTRRIDPEMLEADSALPRNENCGGGDDSNNKSASKTLNKRPRLVWTPQLHKR 149

Query: 246 FVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTASDHL 416
           FVD V HLG++ AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR+Q     GPT+SDHL
Sbjct: 150 FVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPTSSDHL 209

Query: 417 FLMTPLP 437
           F  TP+P
Sbjct: 210 FAFTPVP 216


>tr|A9SQM1|A9SQM1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47310 PE=4 SV=1
          Length = 185

 Score =  140 bits (354), Expect = 4e-32
 Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 3/106 (2%)
 Frame = +3

Query: 129 GEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPKTIMQL 308
           G A + +    P  N + E  ART+KRPRLVWTP+LHKRFVDAV HLG++ AVPKTIMQL
Sbjct: 81  GNAKDTDSGGGPV-NSNEETNARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQL 139

Query: 309 MNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTASDHLFLMTPLP 437
           MNVEGLTRENVASHLQKYRLYLKR+Q     GP A+D LF  TPLP
Sbjct: 140 MNVEGLTRENVASHLQKYRLYLKRMQGLSSDGPPANDQLFSSTPLP 185


>tr|A9RUA4|A9RUA4_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_34063 PE=4 SV=1
          Length = 197

 Score =  140 bits (353), Expect = 6e-32
 Identities = 75/117 (64%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +3

Query: 96  GSDVAPRMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGV 275
           GS    R   D + ++ +    P  N + EA ART+KRPRLVWTP+LHKRFVDAV HLG+
Sbjct: 79  GSAKNARKLADSDFEDTDSGGGPV-NSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGI 137

Query: 276 RTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTASDHLFLMTPLP 437
           + AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR+Q     GP A+D LF  T LP
Sbjct: 138 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLPSDGPMANDQLFASTSLP 194


>tr|A9RUA1|A9RUA1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_34062 PE=4 SV=1
          Length = 193

 Score =  140 bits (353), Expect = 6e-32
 Identities = 75/117 (64%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +3

Query: 96  GSDVAPRMDVDGEADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGV 275
           GS    R   D + ++ +    P  N + EA ART+KRPRLVWTP+LHKRFVDAV HLG+
Sbjct: 75  GSAKNARKLADSDFEDTDSGGGPV-NSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGI 133

Query: 276 RTAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRVQ---QGGPTASDHLFLMTPLP 437
           + AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR+Q     GP A+D LF  T LP
Sbjct: 134 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLPSDGPMANDQLFASTSLP 190


>tr|A2Q6F5|A2Q6F5_MEDTR Homeodomain-related OS=Medicago truncatula
           GN=MtrDRAFT_AC183371g23v1 PE=4 SV=1
          Length = 299

 Score =  138 bits (347), Expect = 3e-31
 Identities = 75/118 (63%), Positives = 85/118 (72%), Gaps = 16/118 (13%)
 Frame = +3

Query: 135 ADEVELTPSPAENVHGEALARTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPKTIMQLMN 314
           AD  ELT   A    GE  ART+KRPRLVWTP+LHKRFVDAV HLG++ AVPKTIMQLM+
Sbjct: 71  ADSTELTSGTA----GEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 126

Query: 315 VEGLTRENVASHLQKYRLYLKRVQ----------QGGPTAS------DHLFLMTPLPP 440
           V+GLTRENVASHLQKYRLYLKR+Q           GG +AS      DHLF  +P+PP
Sbjct: 127 VDGLTRENVASHLQKYRLYLKRMQGISSGGGGGASGGGSASVNDAATDHLFASSPVPP 184


>tr|Q9FF65|Q9FF65_ARATH Similarity to unknown protein (At5g05090)
           (Putative uncharacterized protein At5g05090)
           OS=Arabidopsis thaliana GN=At5g05090 PE=2 SV=1
          Length = 266

 Score =  137 bits (346), Expect = 4e-31
 Identities = 71/110 (64%), Positives = 83/110 (75%), Gaps = 13/110 (11%)
 Frame = +3

Query: 180 GEALARTMKRPRLVWTPELHKRFVDAVTHLGVRTAVPKTIMQLMNVEGLTRENVASHLQK 359
           G+  ART+KRPRLVWTP+LHKRFVDAV HLG++ AVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 72  GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 131

Query: 360 YRLYLKRVQQGGPTA----SDHLFLMTPLPP---------ASARFQPGFV 470
           YRLYLKR++ GG       SDHLF  +P+PP         +S  F P FV
Sbjct: 132 YRLYLKRMKSGGGGGGSGDSDHLFASSPVPPHFLHPTSRQSSDLFIPSFV 181