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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945280
Clone id YMU02A01NGRL0008_N01
Library
Length 460
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_N01. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAATTGTCCGTGTGTGCCAATGCGTGAAAGGAAGGAGTGCCACTGCATGCTTTTTTTAAC
CAAGGAAAATGACTTTGCTGGTGAGGAACAGGTCATAGCGCTCGATGAAATCAAGGATCT
GACTGCAAACTTTTAGCCGCTGGACTAGAAAGCTGTGAAATTTGAGCAATACAGATTTAT
TGAAGCTCATGGAAAAGCTTTGAAAGGATAAATTACGGGCTTGTCTGCCCCAAGCATGGA
GGAACTCACCGGTCTCTAAATTCTTTGTATAAATTTTTGAGTACTACCATCACTCTTGTC
ATGAACAAGTCTTCAGAGTGTGATGAGGAAGACTGTTCTCTTTTTCCACCTTTTATGTAA
GCATGGTTCTGACTCTTTGTACTTTTATAAGGAAACCTTGTATTAGAAAGAAAAATTCTT
TCATGCTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P41349
Definition sp|P41349|FTRC2_SPIOL Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea
Align length 43
Score (bit) 83.6
E-value 3.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945280|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_N01, 5'
         (430 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41349|FTRC2_SPIOL Ferredoxin-thioredoxin reductase catalytic...    84   3e-16
sp|O49856|FTRC_SOYBN Ferredoxin-thioredoxin reductase catalytic ...    83   4e-16
sp|P41348|FTRC1_SPIOL Ferredoxin-thioredoxin reductase catalytic...    82   7e-16
sp|P41347|FTRC_MAIZE Ferredoxin-thioredoxin reductase catalytic ...    80   3e-15
sp|Q9TM25|FTRC_CYACA Ferredoxin-thioredoxin reductase, catalytic...    67   4e-11
sp|O78461|FTRC_GUITH Ferredoxin-thioredoxin reductase, catalytic...    66   5e-11
sp|Q1XDA1|FTRC_PORYE Ferredoxin-thioredoxin reductase, catalytic...    60   4e-09
sp|P51386|FTRC_PORPU Ferredoxin-thioredoxin reductase, catalytic...    60   5e-09
sp|Q1RH58|GPDA_RICBR Glycerol-3-phosphate dehydrogenase [NAD(P)+...    32   1.4  
sp|A8GUW7|GPDA_RICB8 Glycerol-3-phosphate dehydrogenase [NAD(P)+...    32   1.4  
sp|P13956|ERM_BACSU rRNA adenine N-6-methyltransferase OS=Bacill...    29   7.1  
sp|P06572|ERMM_STAEP rRNA adenine N-6-methyltransferase OS=Staph...    29   7.1  
sp|P13978|ERMC3_STAAU rRNA adenine N-6-methyltransferase OS=Stap...    29   7.1  
sp|P13957|ERMC2_STAAU rRNA adenine N-6-methyltransferase OS=Stap...    29   7.1  
sp|P02979|ERMC1_STAAU rRNA adenine N-6-methyltransferase OS=Stap...    29   7.1  
sp|Q5VXM1|CDCP2_HUMAN CUB domain-containing protein 2 OS=Homo sa...    29   7.1  

>sp|P41349|FTRC2_SPIOL Ferredoxin-thioredoxin reductase catalytic
           chain, chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 148

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT ENDFAG++Q I LDEI+++TAN
Sbjct: 105 NCPCVPMRERKECHCMLFLTPENDFAGKDQTIGLDEIREVTAN 147


>sp|O49856|FTRC_SOYBN Ferredoxin-thioredoxin reductase catalytic
           chain, chloroplastic OS=Glycine max GN=FTRC PE=2 SV=1
          Length = 144

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT +NDFAG EQ I LDEIK+ TAN
Sbjct: 101 NCPCVPMRERKECHCMLFLTPDNDFAGNEQTITLDEIKESTAN 143


>sp|P41348|FTRC1_SPIOL Ferredoxin-thioredoxin reductase catalytic
           chain, chloroplastic OS=Spinacia oleracea GN=FTRC PE=1
           SV=2
          Length = 144

 Score = 82.4 bits (202), Expect = 7e-16
 Identities = 34/43 (79%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT +NDFAG+EQ I LDEI+++T+N
Sbjct: 101 NCPCVPMRERKECHCMLFLTPDNDFAGKEQTITLDEIREVTSN 143


>sp|P41347|FTRC_MAIZE Ferredoxin-thioredoxin reductase catalytic
           chain, chloroplastic OS=Zea mays GN=FTRC PE=2 SV=1
          Length = 152

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTANF 133
           NCPCVPMRERKECHCMLFLT +NDFAG++QVI+ +EIK+ T+ F
Sbjct: 109 NCPCVPMRERKECHCMLFLTPDNDFAGKDQVISFEEIKEATSKF 152


>sp|Q9TM25|FTRC_CYACA Ferredoxin-thioredoxin reductase, catalytic
           chain OS=Cyanidium caldarium GN=ftrB PE=3 SV=1
          Length = 111

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIK 115
           NCPCVPMRERKECHCMLFL   N+F+GE Q+I+ D+++
Sbjct: 70  NCPCVPMRERKECHCMLFLQPSNEFSGESQLISKDDLQ 107


>sp|O78461|FTRC_GUITH Ferredoxin-thioredoxin reductase, catalytic
           chain OS=Guillardia theta GN=ftrB PE=3 SV=1
          Length = 102

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVI 97
           NCPCVPMRERKECHCMLFLTK+N+FAG  Q +
Sbjct: 71  NCPCVPMRERKECHCMLFLTKDNEFAGSSQTL 102


>sp|Q1XDA1|FTRC_PORYE Ferredoxin-thioredoxin reductase, catalytic
           chain OS=Porphyra yezoensis GN=ftrB PE=3 SV=2
          Length = 116

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVI 97
           NCPCVPMRER+ECHCMLFLT +N+FA + Q I
Sbjct: 75  NCPCVPMRERRECHCMLFLTPDNEFASDLQEI 106


>sp|P51386|FTRC_PORPU Ferredoxin-thioredoxin reductase, catalytic
           chain OS=Porphyra purpurea GN=ftrB PE=3 SV=1
          Length = 118

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVI 97
           NCPCVPMRERKECHCMLFLT +N+F  + Q I
Sbjct: 75  NCPCVPMRERKECHCMLFLTPDNEFTSDLQEI 106


>sp|Q1RH58|GPDA_RICBR Glycerol-3-phosphate dehydrogenase [NAD(P)+]
           OS=Rickettsia bellii (strain RML369-C) GN=gpsA PE=3 SV=1
          Length = 314

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -1

Query: 241 LHAWGRQARNLSF-QSFSMSFNKSVLLKFHSFLVQRLKVCSQILDFIERYDL 89
           L  + R +RN  F   F +S +K   L+ +  LV+  +    +L+ IERYDL
Sbjct: 250 LTCYSRSSRNTKFGYEFGISKDKQKFLQEYKELVEGREAIKLVLELIERYDL 301


>sp|A8GUW7|GPDA_RICB8 Glycerol-3-phosphate dehydrogenase [NAD(P)+]
           OS=Rickettsia bellii (strain OSU 85-389) GN=gpsA PE=3
           SV=1
          Length = 314

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -1

Query: 241 LHAWGRQARNLSF-QSFSMSFNKSVLLKFHSFLVQRLKVCSQILDFIERYDL 89
           L  + R +RN  F   F +S +K   L+ +  LV+  +    +L+ IERYDL
Sbjct: 250 LTCYSRSSRNTKFGYEFGISKDKQKFLQEYKELVEGREAIKLVLELIERYDL 301
tr_hit_id Q94IK0
Definition tr|Q94IK0|Q94IK0_SOLTU Ferredoxin-thioredoxin-reductase catalytic subunit B OS=Solanum tuberosum
Align length 43
Score (bit) 83.6
E-value 5.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945280|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_N01, 5'
         (430 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q94IK0|Q94IK0_SOLTU Ferredoxin-thioredoxin-reductase catalyti...    84   5e-15
tr|B8LRQ9|B8LRQ9_PICSI Putative uncharacterized protein OS=Picea...    83   8e-15
tr|A9NL74|A9NL74_PICSI Putative uncharacterized protein OS=Picea...    83   8e-15
tr|Q9SJ89|Q9SJ89_ARATH Putative ferredoxin-thioredoxin reductase...    80   4e-14
tr|Q6LBH9|Q6LBH9_MAIZE Ferredoxin-thioredoxin reductase (Fragmen...    80   4e-14
tr|B6TNR7|B6TNR7_MAIZE Ferredoxin-thioredoxin reductase catalyti...    80   4e-14
tr|A9PJH5|A9PJH5_POPJC Putative uncharacterized protein OS=Popul...    80   4e-14
tr|A7PMG4|A7PMG4_VITVI Chromosome chr14 scaffold_21, whole genom...    80   4e-14
tr|A3QQP9|A3QQP9_MESVI Chloroplast ferredoxin-thioredoxin reduct...    80   4e-14
tr|Q6L8H7|Q6L8H7_9ASTR Ferredoxin OS=Codonopsis lanceolata PE=2 ...    80   5e-14
tr|A9RJI0|A9RJI0_PHYPA Predicted protein OS=Physcomitrella paten...    80   5e-14
tr|Q6K471|Q6K471_ORYSJ Os09g0249900 protein OS=Oryza sativa subs...    80   7e-14
tr|B8BD98|B8BD98_ORYSI Putative uncharacterized protein OS=Oryza...    80   7e-14
tr|A9NTH1|A9NTH1_PICSI Putative uncharacterized protein OS=Picea...    80   7e-14
tr|A4S824|A4S824_OSTLU Ferredoxin thioredoxin reductase beta cha...    79   1e-13
tr|B5ILB7|B5ILB7_9CHRO Ferredoxin thioredoxin reductase catalyti...    78   3e-13
tr|A8YGU4|A8YGU4_MICAE FtrC protein OS=Microcystis aeruginosa PC...    77   3e-13
tr|A8IWK2|A8IWK2_CHLRE Ferredoxin thioredoxin reductase, catalyt...    77   6e-13
tr|Q4C4P6|Q4C4P6_CROWT Ferredoxin thioredoxin reductase, beta ch...    76   1e-12
tr|B0JX64|B0JX64_MICAN Ferredoxin-thioredoxin reductase catalyti...    75   1e-12
tr|B2IWB5|B2IWB5_NOSP7 Ferredoxin thioredoxin reductase, beta ch...    73   8e-12
tr|B0C9K1|B0C9K1_ACAM1 Ferredoxin-thioredoxin reductase catalyti...    73   8e-12
tr|A3YVY3|A3YVY3_9SYNE Ferredoxin-thioredoxin reductase catalyti...    73   8e-12
tr|Q8YPX5|Q8YPX5_ANASP Ferredoxin--thioredoxin reductase catalyt...    72   1e-11
tr|Q3MCM2|Q3MCM2_ANAVT Ferredoxin thioredoxin reductase, beta ch...    72   1e-11
tr|B1XQ57|B1XQ57_SYNP2 Ferredoxin-thioredoxin reductase catalyti...    72   1e-11
tr|A3IZY6|A3IZY6_9CHRO Ferredoxin--thioredoxin reductase catalyt...    72   1e-11
tr|A0ZHN1|A0ZHN1_NODSP Ferredoxin--thioredoxin reductase catalyt...    72   1e-11
tr|Q115H7|Q115H7_TRIEI Ferredoxin thioredoxin reductase, beta ch...    71   2e-11
tr|B1WYY2|B1WYY2_CYAA5 Ferredoxin thioredoxin reductase catalyti...    71   3e-11

>tr|Q94IK0|Q94IK0_SOLTU Ferredoxin-thioredoxin-reductase catalytic
           subunit B OS=Solanum tuberosum GN=ftrbpot PE=2 SV=1
          Length = 148

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT +NDFAGEEQ I+++EIK+ TAN
Sbjct: 105 NCPCVPMRERKECHCMLFLTPDNDFAGEEQTISMEEIKETTAN 147


>tr|B8LRQ9|B8LRQ9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 103

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTANF 133
           NCPCVPMRERKECHCMLFLT +NDF+G+EQ I+ +EIKDLTA F
Sbjct: 60  NCPCVPMRERKECHCMLFLTTDNDFSGKEQTISSEEIKDLTAKF 103


>tr|A9NL74|A9NL74_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 150

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTANF 133
           NCPCVPMRERKECHCMLFLT +NDF+G+EQ I+ +EIKDLTA F
Sbjct: 107 NCPCVPMRERKECHCMLFLTTDNDFSGKEQTISSEEIKDLTAKF 150


>tr|Q9SJ89|Q9SJ89_ARATH Putative ferredoxin-thioredoxin reductase
           OS=Arabidopsis thaliana GN=At2g04700 PE=2 SV=1
          Length = 146

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT +NDFAG++Q I  DEIK+ TAN
Sbjct: 103 NCPCVPMRERKECHCMLFLTPDNDFAGKDQTITSDEIKETTAN 145


>tr|Q6LBH9|Q6LBH9_MAIZE Ferredoxin-thioredoxin reductase (Fragment)
           OS=Zea mays PE=2 SV=1
          Length = 115

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTANF 133
           NCPCVPMRERKECHCMLFLT +NDFAG++QVI+ +EIK+ T+ F
Sbjct: 72  NCPCVPMRERKECHCMLFLTPDNDFAGKDQVISFEEIKEATSKF 115


>tr|B6TNR7|B6TNR7_MAIZE Ferredoxin-thioredoxin reductase catalytic
           chain OS=Zea mays PE=2 SV=1
          Length = 152

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTANF 133
           NCPCVPMRERKECHCMLFLT +NDFAG++QVI+ +EIK+ T+ F
Sbjct: 109 NCPCVPMRERKECHCMLFLTPDNDFAGKDQVISFEEIKEATSKF 152


>tr|A9PJH5|A9PJH5_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 150

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT +NDFAG++Q I+L+EI++ TAN
Sbjct: 107 NCPCVPMRERKECHCMLFLTPDNDFAGKDQTISLEEIRETTAN 149


>tr|A7PMG4|A7PMG4_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020811001
           PE=4 SV=1
          Length = 145

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT +NDFAG++Q I+L+EI++ TAN
Sbjct: 102 NCPCVPMRERKECHCMLFLTPDNDFAGQDQTISLEEIRESTAN 144


>tr|A3QQP9|A3QQP9_MESVI Chloroplast ferredoxin-thioredoxin reductase
           (Fragment) OS=Mesostigma viride PE=2 SV=1
          Length = 136

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLT 124
           NCPCVPMRERKECHCMLFLT ENDFAG+EQ I+++E+K+LT
Sbjct: 93  NCPCVPMRERKECHCMLFLTPENDFAGQEQKISMEEVKELT 133


>tr|Q6L8H7|Q6L8H7_9ASTR Ferredoxin OS=Codonopsis lanceolata PE=2
           SV=1
          Length = 154

 Score = 80.1 bits (196), Expect = 5e-14
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 2   NCPCVPMRERKECHCMLFLTKENDFAGEEQVIALDEIKDLTAN 130
           NCPCVPMRERKECHCMLFLT +NDFAG+EQ I L+EIK+ T N
Sbjct: 111 NCPCVPMRERKECHCMLFLTPDNDFAGQEQSITLEEIKESTTN 153