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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945288
Clone id YMU02A01NGRL0008_N10
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_N10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GGCAGGATGGGTATCTCACGGGACTCCACGCACAAGAGGCGGGCAACTGGAGGCAAGAAG
AAGACATGGCGCAAGAAAAGGAAATACGAGTTGGGTCGTCAACCAGGCATGACTAAGCTG
TCCAGTAACAAGACTGTAAGGAAGATCCGCGTGCGGGGAGGCAATTTCAAGTTTCGTGCT
CTGCGCCTTGATACTGGCAACTACTCATGGGGATCAGAGGCAACGACCAGGAAGACCCGT
ATCTTAGATGTTGTCTACAATGCATCCAATAATGAGCTTGTTAGGACGCAGACGCTCGTG
AAGTCTGCCATTGTTCAGGTGGATGCTGCACCTTTCCGCCAGTGGTATAGCCAGCACTAT
GGTGTGGACTTGGGAAAGAAGAAGAGAGCTGCCAGTGCCAAGAAGGAAGCTGAGGTGACG
GGGAGAAGAAGCAAAGCAAACATGTCGAGCGGAAGATATCTGCTCGTAATGAGGATCGCA
AATTGGATGCTCATCTGGAGGATCAAATTGCAAGTGGACGCCTTCTCGCTTGCATATCAT
CTCGTCCTGGCCAATGTGGGCGAGCCGATGGTTATATTCT
■■Homology search results ■■ -
sp_hit_id Q93VG5
Definition sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis thaliana
Align length 123
Score (bit) 186.0
E-value 3.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945288|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_N10, 5'
         (580 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis t...   186   3e-66
sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa sub...   187   2e-65
sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8...   187   3e-65
sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis t...   182   4e-64
sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca...   186   6e-62
sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus puncta...   149   1e-49
sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera G...   145   6e-49
sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=r...   142   5e-48
sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus ...   142   1e-47
sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus GN=...   142   1e-47
sp|Q4R6P8|RS8_MACFA 40S ribosomal protein S8 OS=Macaca fascicula...   142   1e-47
sp|P62241|RS8_HUMAN 40S ribosomal protein S8 OS=Homo sapiens GN=...   142   1e-47
sp|Q5E958|RS8_BOVIN 40S ribosomal protein S8 OS=Bos taurus GN=RP...   142   1e-47
sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosacchar...   144   1e-47
sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosacchar...   144   1e-47
sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera frugi...   144   3e-47
sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila melan...   141   6e-47
sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis G...   138   1e-45
sp|Q4N3P0|RS8_THEPA 40S ribosomal protein S8 OS=Theileria parva ...   149   1e-45
sp|P05754|RS8_YEAST 40S ribosomal protein S8 OS=Saccharomyces ce...   139   9e-45
sp|Q4UFS9|RS8_THEAN 40S ribosomal protein S8 OS=Theileria annula...   147   2e-44
sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japo...   152   3e-44
sp|Q54E24|RS8_DICDI 40S ribosomal protein S8 OS=Dictyostelium di...   143   5e-43
sp|P48156|RS8_CAEEL 40S ribosomal protein S8 OS=Caenorhabditis e...   142   6e-43
sp|P25204|RS8_LEIMA 40S ribosomal protein S8 OS=Leishmania major...   134   3e-31
sp|A3DNX9|RS8E_STAMF 30S ribosomal protein S8e OS=Staphylothermu...    59   2e-08
sp|P61301|RS8E_NANEQ 30S ribosomal protein S8e OS=Nanoarchaeum e...    55   3e-07
sp|Q6L0D3|RS8E_PICTO 30S ribosomal protein S8e OS=Picrophilus to...    54   4e-07
sp|A0B8P7|RS8E_METTP 30S ribosomal protein S8e OS=Methanosaeta t...    54   7e-07
sp|A2STM4|RS8E_METLZ 30S ribosomal protein S8e OS=Methanocorpusc...    53   1e-06

>sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis
           thaliana GN=RPS8A PE=2 SV=1
          Length = 222

 Score =  186 bits (473), Expect(2) = 3e-66
 Identities = 93/123 (75%), Positives = 100/123 (81%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YE+GRQP  TKLSSNKTVR+IRVRGGN K+RALR
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEATTRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 367 DLG 375
           +LG
Sbjct: 121 ELG 123



 Score = 84.7 bits (208), Expect(2) = 3e-66
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E K+S H+ RKI++R E R LD+H+EDQ ASGRLLACISSRPGQCGRADGYI
Sbjct: 149 EVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYI 200


>sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp.
           japonica GN=RPS8 PE=2 SV=2
          Length = 220

 Score =  187 bits (475), Expect(2) = 2e-65
 Identities = 94/123 (76%), Positives = 99/123 (80%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 81.3 bits (199), Expect(2) = 2e-65
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E K+S HV RK+  R + R LDAH+E+Q  SGRLLACISSRPGQCGRADGYI
Sbjct: 146 EAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYI 197


>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8
           PE=2 SV=2
          Length = 221

 Score =  187 bits (475), Expect(2) = 3e-65
 Identities = 94/123 (76%), Positives = 99/123 (80%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 80.9 bits (198), Expect(2) = 3e-65
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E K+S HV RK+  R E R LD H+E+Q  SGRLLACISSRPGQCGRADGYI
Sbjct: 147 ETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYI 198


>sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis
           thaliana GN=RPS8B PE=2 SV=1
          Length = 210

 Score =  182 bits (461), Expect(2) = 4e-64
 Identities = 93/123 (75%), Positives = 98/123 (79%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP  TKLSSNKTVR+IRVRGGN K+RALR
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGN+SWGSEA TRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPF+Q Y QHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 82.4 bits (202), Expect(2) = 4e-64
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E K+S HV+RK+  R E R LD+HLE+Q +SGRLLACI+SRPGQCGRADGYI
Sbjct: 135 EVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYI 186


>sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca
           GN=RPS8 PE=2 SV=1
          Length = 221

 Score =  186 bits (472), Expect(2) = 6e-62
 Identities = 93/123 (75%), Positives = 100/123 (81%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP  TKLSSNKTVR+IRVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY QHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 367 DLG 375
           ++G
Sbjct: 121 EIG 123



 Score = 70.9 bits (172), Expect(2) = 6e-62
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E K+S HV  K+  R + R LDAH+E+Q   G+LLACISSRPGQCG+ADG I
Sbjct: 145 EAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADGDI 196


>sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus punctatus
           GN=rps8 PE=2 SV=3
          Length = 208

 Score =  149 bits (376), Expect(2) = 1e-49
 Identities = 74/123 (60%), Positives = 86/123 (69%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRD+ H                 YELGR P  TKL   K +  +RVRGGN K+RALR
Sbjct: 1   MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALR 59

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APFRQWY  HY +
Sbjct: 60  LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYAL 119

Query: 367 DLG 375
            LG
Sbjct: 120 PLG 122



 Score = 67.0 bits (162), Expect(2) = 1e-49
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = +3

Query: 426 KKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           KK+SK V++K   R ++ K+   L++Q   G+LLACISSRPGQCGRADGY+
Sbjct: 139 KKRSKKVQKKFDKRRKNSKISPLLDEQFQQGKLLACISSRPGQCGRADGYV 189


>sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera
           GN=RpS8 PE=2 SV=2
          Length = 208

 Score =  145 bits (367), Expect(2) = 6e-49
 Identities = 74/123 (60%), Positives = 85/123 (69%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRD  H                 +ELGR    TKL   + +  +R RGGN K+RALR
Sbjct: 1   MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQR-IHTVRTRGGNKKYRALR 59

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGN+SWGSE TTRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PFRQWY  HY +
Sbjct: 60  LDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVL 119

Query: 367 DLG 375
            LG
Sbjct: 120 PLG 122



 Score = 67.8 bits (164), Expect(2) = 6e-49
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +3

Query: 426 KKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           KK+SK  E K  AR    K++  LE+Q A+GR+LACISSRPGQCGR DGYI
Sbjct: 139 KKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQCGREDGYI 189


>sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=rps8
           PE=2 SV=2
          Length = 208

 Score =  142 bits (359), Expect(2) = 5e-48
 Identities = 71/123 (57%), Positives = 84/123 (68%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRD+ H                 YELGR    TK+   + +  IRVRGGN K+RALR
Sbjct: 1   MGISRDNWHKRRRTGGKRKPVHKKRKYELGRPAANTKIGPRR-IHTIRVRGGNKKYRALR 59

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P+RQWY  HY +
Sbjct: 60  LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYAL 119

Query: 367 DLG 375
            LG
Sbjct: 120 PLG 122



 Score = 67.8 bits (164), Expect(2) = 5e-48
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = +3

Query: 426 KKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           KK+SK V++K + R +  K+   LE+Q   G+LLACISSRPGQCGRADGY+
Sbjct: 139 KKRSKKVQKKFTLRRKTAKISPLLEEQFLQGKLLACISSRPGQCGRADGYV 189


>sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus
           GN=Rps8 PE=1 SV=2
          Length = 208

 Score =  142 bits (358), Expect(2) = 1e-47
 Identities = 70/123 (56%), Positives = 84/123 (68%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRD+ H                 YELGR    TK+   + +  +RVRGGN K+RALR
Sbjct: 1   MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P+RQWY  HY +
Sbjct: 60  LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119

Query: 367 DLG 375
            LG
Sbjct: 120 PLG 122



 Score = 67.0 bits (162), Expect(2) = 1e-47
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = +3

Query: 426 KKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           KK+SK +++K   R ++ K+ + LE+Q   G+LLACI+SRPGQCGRADGY+
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYV 189


>sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus
           GN=Rps8 PE=1 SV=2
          Length = 208

 Score =  142 bits (358), Expect(2) = 1e-47
 Identities = 70/123 (56%), Positives = 84/123 (68%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRD+ H                 YELGR    TK+   + +  +RVRGGN K+RALR
Sbjct: 1   MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P+RQWY  HY +
Sbjct: 60  LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119

Query: 367 DLG 375
            LG
Sbjct: 120 PLG 122



 Score = 67.0 bits (162), Expect(2) = 1e-47
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = +3

Query: 426 KKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           KK+SK +++K   R ++ K+ + LE+Q   G+LLACI+SRPGQCGRADGY+
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYV 189
tr_hit_id A9TGU7
Definition tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens
Align length 123
Score (bit) 192.0
E-value 2.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945288|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_N10, 5'
         (580 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   192   2e-67
tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   189   2e-67
tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   191   2e-66
tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   189   4e-66
tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   192   6e-66
tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   192   6e-66
tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   189   1e-65
tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   192   2e-65
tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea...   191   2e-65
tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocar...   190   2e-65
tr|B4FGG1|B4FGG1_MAIZE Putative uncharacterized protein OS=Zea m...   187   9e-65
tr|A9P8D2|A9P8D2_POPTR Ribosomal protein S8 OS=Populus trichocar...   190   1e-64
tr|B3TM36|B3TM36_ELAGV 40S ribosomal protein S8 OS=Elaeis guinee...   187   3e-64
tr|A2XS59|A2XS59_ORYSI Ribosomal protein S8 OS=Oryza sativa subs...   187   3e-64
tr|A3A6Z9|A3A6Z9_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   187   3e-64
tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   187   3e-64
tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza...   187   3e-64
tr|B7FMW0|B7FMW0_MEDTR Putative uncharacterized protein OS=Medic...   186   3e-64
tr|Q3HRZ6|Q3HRZ6_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...   187   4e-64
tr|B4FE90|B4FE90_MAIZE 40S ribosomal protein S8 OS=Zea mays PE=2...   187   4e-64
tr|Q7XKS7|Q7XKS7_ORYSA Ribosomal protein S8 OS=Oryza sativa GN=O...   187   6e-64
tr|Q0JDZ7|Q0JDZ7_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   187   6e-64
tr|A5AUZ0|A5AUZ0_VITVI Ribosomal protein S8 OS=Vitis vinifera GN...   189   1e-63
tr|Q0WSK1|Q0WSK1_ARATH Ribosomal protein S8 OS=Arabidopsis thali...   182   6e-63
tr|A1YKE4|A1YKE4_BRASY Ribosomal protein S8 OS=Brachypodium sylv...   184   2e-62
tr|B7FGL5|B7FGL5_MEDTR Putative uncharacterized protein OS=Medic...   179   4e-62
tr|Q2XPV9|Q2XPV9_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...   175   3e-61
tr|A7P0G2|A7P0G2_VITVI Ribosomal protein S8 OS=Vitis vinifera GN...   179   1e-60
tr|B6DMH1|B6DMH1_9LAMI Putative 40S ribosomal protein S8-like pr...   175   2e-60
tr|A8HVQ1|A8HVQ1_CHLRE Ribosomal protein S8 OS=Chlamydomonas rei...   170   2e-57

>tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194964 PE=3 SV=1
          Length = 216

 Score =  192 bits (488), Expect(2) = 2e-67
 Identities = 95/123 (77%), Positives = 102/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGNFKFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNFKFRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 367 DLG 375
           ++G
Sbjct: 121 EIG 123



 Score = 87.0 bits (214), Expect(2) = 2e-67
 Identities = 41/52 (78%), Positives = 46/52 (88%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E+K+SKHV RKI+ R E +KLDAHLEDQ ASGRLLACI+SRPGQCGR DGYI
Sbjct: 142 EEKKSKHVLRKIAKRVESQKLDAHLEDQFASGRLLACIASRPGQCGRVDGYI 193


>tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_191463 PE=3 SV=1
          Length = 216

 Score =  189 bits (481), Expect(2) = 2e-67
 Identities = 95/123 (77%), Positives = 101/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGN+SWGSEA TRKTRILDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 367 DLG 375
           ++G
Sbjct: 121 EIG 123



 Score = 89.7 bits (221), Expect(2) = 2e-67
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           EKKQS HV RKI+ R E +KLDAHLEDQ ASGRLLACISSRPGQCGR+DGYI
Sbjct: 142 EKKQSSHVLRKIAKRAEGQKLDAHLEDQFASGRLLACISSRPGQCGRSDGYI 193


>tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_208398 PE=3 SV=1
          Length = 216

 Score =  191 bits (485), Expect(2) = 2e-66
 Identities = 96/123 (78%), Positives = 101/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AIVQVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIVQVDAAPFRTWYSQHYGV 120

Query: 367 DLG 375
           ++G
Sbjct: 121 EIG 123



 Score = 84.7 bits (208), Expect(2) = 2e-66
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E+K+S HV++K++ R E  KLD+HLEDQ ASGRLLACI+SRPGQCGRADGYI
Sbjct: 142 EEKKSNHVQKKLAKRVEGHKLDSHLEDQFASGRLLACIASRPGQCGRADGYI 193


>tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194737 PE=3 SV=1
          Length = 216

 Score =  189 bits (480), Expect(2) = 4e-66
 Identities = 94/123 (76%), Positives = 101/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 367 DLG 375
           ++G
Sbjct: 121 EIG 123



 Score = 85.9 bits (211), Expect(2) = 4e-66
 Identities = 39/52 (75%), Positives = 47/52 (90%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E+K+S HV+RK++ R E +KLD+HLEDQ ASGRLLACI+SRPGQCGRADGYI
Sbjct: 142 EEKKSAHVQRKLAKRLEGQKLDSHLEDQFASGRLLACIASRPGQCGRADGYI 193


>tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis
           PE=2 SV=1
          Length = 222

 Score =  192 bits (489), Expect(2) = 6e-66
 Identities = 95/123 (77%), Positives = 101/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 81.6 bits (200), Expect(2) = 6e-66
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           EKK+SKH+ +KI  R E  KLD+HLE+Q ASGRLLA I+SRPGQCGRADGYI
Sbjct: 147 EKKKSKHLLKKIEKRQEGHKLDSHLEEQFASGRLLAAIASRPGQCGRADGYI 198


>tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis
           PE=2 SV=1
          Length = 221

 Score =  192 bits (489), Expect(2) = 6e-66
 Identities = 95/123 (77%), Positives = 101/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 81.6 bits (200), Expect(2) = 6e-66
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           EKK+SKH+ +KI  R E  KLD+HLE+Q ASGRLLA I+SRPGQCGRADGYI
Sbjct: 146 EKKKSKHLLKKIEKRQEGHKLDSHLEEQFASGRLLAAIASRPGQCGRADGYI 197


>tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_110504 PE=3 SV=1
          Length = 216

 Score =  189 bits (480), Expect(2) = 1e-65
 Identities = 94/123 (76%), Positives = 101/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 367 DLG 375
           ++G
Sbjct: 121 EIG 123



 Score = 84.0 bits (206), Expect(2) = 1e-65
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           + KQS HV RKI+ R E +KLD+HLEDQ ASGRLLACI+SRPGQCGRADGYI
Sbjct: 142 QTKQSGHVLRKIAKRVEGQKLDSHLEDQFASGRLLACIASRPGQCGRADGYI 193


>tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis
           PE=2 SV=1
          Length = 221

 Score =  192 bits (489), Expect(2) = 2e-65
 Identities = 95/123 (77%), Positives = 101/123 (82%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 80.1 bits (196), Expect(2) = 2e-65
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           EKK+SKH+ +KI  R E  KLD+HLE+Q  SGRLLA I+SRPGQCGRADGYI
Sbjct: 146 EKKKSKHLLKKIEKRQEGHKLDSHLEEQFGSGRLLAAIASRPGQCGRADGYI 197


>tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 221

 Score =  191 bits (484), Expect(2) = 2e-65
 Identities = 94/123 (76%), Positives = 100/123 (81%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSE  TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+
Sbjct: 61  LDTGNYSWGSEPVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 81.6 bits (200), Expect(2) = 2e-65
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           EKK+SKH+ +KI  R E  KLD+HLE+Q ASGRLLA I+SRPGQCGRADGYI
Sbjct: 146 EKKKSKHLLKKIEKRQEGHKLDSHLEEQFASGRLLAAIASRPGQCGRADGYI 197


>tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocarpa
           PE=2 SV=1
          Length = 220

 Score =  190 bits (483), Expect(2) = 2e-65
 Identities = 96/123 (78%), Positives = 100/123 (81%)
 Frame = +1

Query: 7   MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 186
           MGISRDS H                 YELGRQP  TKLSSNKTVR+IRVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 187 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 366
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY QHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 367 DLG 375
           D+G
Sbjct: 121 DIG 123



 Score = 82.0 bits (201), Expect(2) = 2e-65
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = +3

Query: 423 EKKQSKHVERKISARNEDRKLDAHLEDQIASGRLLACISSRPGQCGRADGYI 578
           E+K+SKHV+RK+  R + RKLD H+E+Q  SGRLLA ISSRPGQCGRADGYI
Sbjct: 145 EEKKSKHVQRKLEKRQQTRKLDPHIEEQFGSGRLLASISSRPGQCGRADGYI 196