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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945300
Clone id YMU02A01NGRL0008_N24
Library
Length 395
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_N24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
ACTGGTAGCGGAGAGCTTTTAATGGTTGAGCTGTCTTTCCTCTCTCACCGGTTTTAAGAA
TAGAAGGATCGCATCTTTGCAAGGTACTCTGACAAAGAGGATGTTCTTGTCCCCAAACAT
ATGTGGTTTCGTATTATTTCTCCAGCCTTCGATTTATATGACTCTATCTAGTCGCTCCAT
CTACTTGTGAACTCGTATACATTCTGTCCAATCAAAACTGATATGACACCACGTGAAAAA
CTTGATTCATTTGCTTCCTCCATGAAGATTGATAACGAATAGAATATATTGCTAGACATC
TAAAATAGCTGACTCATCGTCTCTAAACCTCATAGAATCCATCTGGGATATAAAGTTGGA
ATATATAAATCCGGGTTTGTCAAGATTATTGAACA
■■Homology search results ■■ -
sp_hit_id Q8NVJ0
Definition sp|Q8NVJ0|LEU3_STAAW 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MW2)
Align length 35
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945300|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_N24, 5'
         (395 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NVJ0|LEU3_STAAW 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|Q6G7Q0|LEU3_STAAS 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|Q6GF15|LEU3_STAAR 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|P65101|LEU3_STAAN 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|P65100|LEU3_STAAM 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|Q5HEE3|LEU3_STAAC 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|Q2YUF1|LEU3_STAAB 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|Q2FF66|LEU3_STAA3 3-isopropylmalate dehydrogenase OS=Staphylo...    30   4.9  
sp|Q92TB5|COAA_RHIME Pantothenate kinase OS=Rhizobium meliloti G...    30   4.9  
sp|A6UEK1|COAA_SINMW Pantothenate kinase OS=Sinorhizobium medica...    29   8.3  

>sp|Q8NVJ0|LEU3_STAAW 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain MW2) GN=leuB PE=3 SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|Q6G7Q0|LEU3_STAAS 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain MSSA476) GN=leuB PE=3
           SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|Q6GF15|LEU3_STAAR 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain MRSA252) GN=leuB PE=3
           SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|P65101|LEU3_STAAN 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain N315) GN=leuB PE=3 SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|P65100|LEU3_STAAM 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
           GN=leuB PE=3 SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|Q5HEE3|LEU3_STAAC 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain COL) GN=leuB PE=3 SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|Q2YUF1|LEU3_STAAB 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
           GN=leuB PE=3 SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|Q2FF66|LEU3_STAA3 3-isopropylmalate dehydrogenase
           OS=Staphylococcus aureus (strain USA300) GN=leuB PE=3
           SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 91  DKEDVLVPKHMWFRIISPAFDLYDSI*SLHLLVNS 195
           DKE+VL    +W ++++    LY  +   HLLV++
Sbjct: 184 DKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA 218


>sp|Q92TB5|COAA_RHIME Pantothenate kinase OS=Rhizobium meliloti
           GN=coaA PE=3 SV=1
          Length = 331

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = -3

Query: 372 GFIYSNFISQMDSMRFRDDESAILDV*QYILFVINLHGGSK*IKFFTWCHISFD 211
           GF+Y N + Q +++  R    A  D+   + F+  +  G   +K  T+ H+++D
Sbjct: 142 GFLYPNAVLQRENLMDRKGFPASYDIGALLRFLSAIKAGRPNVKAPTYSHLTYD 195


>sp|A6UEK1|COAA_SINMW Pantothenate kinase OS=Sinorhizobium medicae
           (strain WSM419) GN=coaA PE=3 SV=1
          Length = 331

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = -3

Query: 372 GFIYSNFISQMDSMRFRDDESAILDV*QYILFVINLHGGSK*IKFFTWCHISFD 211
           GF+Y N + Q +S+  R       D+   + F+  +  G   +K  T+ H+++D
Sbjct: 142 GFLYPNAVLQRESLMDRKGFPESYDIGALLRFLSAIKAGRPNVKAPTYSHLTYD 195
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945300|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_N24, 5'
         (395 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******