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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945312
Clone id YMU02A01NGRL0008_O14
Library
Length 244
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_O14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GGAGATTGGTGGTGTCTTTGAAAGTGTTCAGCCTTCTGATACTGACCTTGGCTCTAAAGC
CCCCAAAGATGTCAAGATTCAGGGTATTTGGTATGCGCAAGTAGAGTAGACGGAGAAAAC
TTGGGGTCTTTCCTTTCGCAAGGCCCTGGCTTGACCCTGTCCTTGTTTCTATATTGTTAT
GTAAAGCAAAGTTCTGAAAAAAGGTGCCTGTTCATAAGAAAAAAAAAAAAAAAAAAAAAA
AAAA
■■Homology search results ■■ -
sp_hit_id O49079
Definition sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis
Align length 35
Score (bit) 68.9
E-value 7.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945312|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_O14, 5'
         (215 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop...    69   7e-12
sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla...    67   2e-11
sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop...    66   5e-11
sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop...    66   5e-11
sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop...    66   5e-11
sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo...    64   2e-10
sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo...    64   3e-10
sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop...    63   5e-10
sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop...    62   7e-10
sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop...    62   7e-10
sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop...    61   2e-09
sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop...    59   1e-08
sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype...    55   1e-07
sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype...    54   2e-07
sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype...    53   5e-07
sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype...    46   7e-05
sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype...    46   7e-05
sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype...    45   1e-04
sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop...    40   0.004

>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1
          Length = 329

 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+E
Sbjct: 295 EVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329


>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1
          Length = 329

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 29/35 (82%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 294 EVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328


>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1
          Length = 332

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 298 EVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332


>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1
          Length = 333

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 298 EVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332


>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2
          Length = 329

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 295 EVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329


>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2,
           chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1
          Length = 331

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+E
Sbjct: 297 EVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331


>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1,
           chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2
          Length = 332

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+K PKDVKIQG+WY Q+E
Sbjct: 298 EVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332


>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1
          Length = 332

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 26/35 (74%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVF+S+QPSDTDLG+K PKDVKI+G+WYAQ+E
Sbjct: 296 EVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330


>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2
          Length = 338

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQV 103
           EI GVFES+QPSDTDLG+K PKD+K  G+WYAQ+
Sbjct: 301 EIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334


>sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1,
           chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2
           SV=1
          Length = 291

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           EI GVFES+QPSDTDLG+K PKD+K+ G+WYAQ++
Sbjct: 257 EIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291
tr_hit_id A9NV80
Definition tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 35
Score (bit) 68.9
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945312|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_O14, 5'
         (215 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea...    69   1e-10
tr|A9NRV4|A9NRV4_PICSI Putative uncharacterized protein OS=Picea...    69   1e-10
tr|B6T3B2|B6T3B2_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea...    68   3e-10
tr|B4FRF2|B4FRF2_MAIZE Putative uncharacterized protein OS=Zea m...    68   3e-10
tr|B4F9R9|B4F9R9_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea...    68   3e-10
tr|B7FHI9|B7FHI9_MEDTR Putative uncharacterized protein OS=Medic...    67   3e-10
tr|Q943W1|Q943W1_ORYSJ cDNA clone:001-013-B04, full insert seque...    66   8e-10
tr|Q84QE8|Q84QE8_TOBAC Oxygen evolving complex 33 kDa photosyste...    66   8e-10
tr|Q58H58|Q58H58_NICBE Chloroplast photosynthetic oxygen-evolvin...    66   8e-10
tr|B8A8L8|B8A8L8_ORYSI Putative uncharacterized protein OS=Oryza...    66   8e-10
tr|A6N1L3|A6N1L3_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    66   8e-10
tr|A6N1E2|A6N1E2_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    66   8e-10
tr|A6N109|A6N109_ORYSI Oxygen-evolving enhancer protein 1 (Fragm...    66   8e-10
tr|A9PK45|A9PK45_POPJC Putative uncharacterized protein OS=Popul...    66   1e-09
tr|A7NTK5|A7NTK5_VITVI Chromosome chr18 scaffold_1, whole genome...    66   1e-09
tr|A5JV93|A5JV93_9POAL Chloroplast oxygen-evolving enhancer prot...    66   1e-09
tr|A5BPG1|A5BPG1_VITVI Putative uncharacterized protein OS=Vitis...    66   1e-09
tr|A9PJ90|A9PJ90_POPJC Putative uncharacterized protein OS=Popul...    65   1e-09
tr|A9PHI5|A9PHI5_POPTR Putative uncharacterized protein OS=Popul...    65   1e-09
tr|A9PGS6|A9PGS6_POPTR Putative uncharacterized protein OS=Popul...    65   1e-09
tr|A9CMA1|A9CMA1_9VIRI 33kDa oxygen evolving protein of photosys...    65   1e-09
tr|A9CM95|A9CM95_9CHLO 33kDa oxygen evolving protein of photosys...    65   1e-09
tr|A9CM98|A9CM98_NEPOL 33kDa oxygen evolving protein of photosys...    65   2e-09
tr|A9CM96|A9CM96_9CHLO 33kDa oxygen evolving protein of photosys...    65   2e-09
tr|A9PHA9|A9PHA9_POPTR Putative uncharacterized protein OS=Popul...    65   2e-09
tr|Q9LRC4|Q9LRC4_9ROSI Oxygen evolving enhancer protein 1 OS=Bru...    64   3e-09
tr|Q7XYP5|Q7XYP5_BIGNA Photosystem II protein PsbO OS=Bigelowiel...    64   3e-09
tr|Q6RUN4|Q6RUN4_TOBAC ERT12 (Fragment) OS=Nicotiana tabacum GN=...    64   3e-09
tr|Q1WLV2|Q1WLV2_CHLIN Chloroplast oxygen-evolving enhancer prot...    64   3e-09
tr|A9CM97|A9CM97_9CHLO 33kDa oxygen evolving protein of photosys...    64   3e-09

>tr|A9NV80|A9NV80_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 341

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+E
Sbjct: 305 EVIGVFESLQPSDTDLGSKAPKDVKIQGIWYAQIE 339


>tr|A9NRV4|A9NRV4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 341

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLGSKAPKDVKIQGIWYAQ+E
Sbjct: 305 EVIGVFESLQPSDTDLGSKAPKDVKIQGIWYAQIE 339


>tr|B6T3B2|B6T3B2_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 329

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFESVQPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 295 EVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 329


>tr|B4FRF2|B4FRF2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 230

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFESVQPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 196 EVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 230


>tr|B4F9R9|B4F9R9_MAIZE Oxygen-evolving enhancer protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 335

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFESVQPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 301 EVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 335


>tr|B7FHI9|B7FHI9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 170

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 34/35 (97%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+KAPKDVKIQG+WYAQ+E
Sbjct: 135 EVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 169


>tr|Q943W1|Q943W1_ORYSJ cDNA clone:001-013-B04, full insert sequence
           OS=Oryza sativa subsp. japonica GN=B1080D07.27 PE=1 SV=1
          Length = 333

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFESVQPSDTDLG+K PKDVKIQG+WYAQ+E
Sbjct: 299 EVIGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE 333


>tr|Q84QE8|Q84QE8_TOBAC Oxygen evolving complex 33 kDa photosystem
           II protein OS=Nicotiana tabacum GN=PsbO PE=2 SV=1
          Length = 332

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 298 EVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332


>tr|Q58H58|Q58H58_NICBE Chloroplast photosynthetic oxygen-evolving
           protein 33 kDa subunit OS=Nicotiana benthamiana GN=psbO
           PE=2 SV=1
          Length = 332

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFES+QPSDTDLG+K PKDVKIQGIWYAQ+E
Sbjct: 298 EVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332


>tr|B8A8L8|B8A8L8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02088 PE=4 SV=1
          Length = 333

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2

Query: 2   EIGGVFESVQPSDTDLGSKAPKDVKIQGIWYAQVE 106
           E+ GVFESVQPSDTDLG+K PKDVKIQG+WYAQ+E
Sbjct: 299 EVIGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE 333