BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945322|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_P03, 5'
         (420 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49565|FB239_ARATH Putative F-box protein At4g21240 OS=Arabid...    33   0.60 
sp|Q04G44|G6PI_OENOB Glucose-6-phosphate isomerase OS=Oenococcus...    31   1.7  
sp|Q9CSB4|PAR3L_MOUSE Partitioning defective 3 homolog B OS=Mus ...    30   3.8  
sp|Q01954|BNC1_HUMAN Zinc finger protein basonuclin-1 OS=Homo sa...    30   4.9  
sp|Q5XM24|APRA_DICDI Autocrine proliferation repressor OS=Dictyo...    30   5.0  
sp|Q9SS35|FB137_ARATH Putative F-box protein At3g10240 OS=Arabid...    29   6.6  

>sp|O49565|FB239_ARATH Putative F-box protein At4g21240
           OS=Arabidopsis thaliana GN=At4g21240 PE=2 SV=1
          Length = 417

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -1

Query: 216 TKDKEKFSKSETGQTIQIYIACIPLDLVPSIVLFNPSQIVSSFR--QNLWSSVT 61
           T+++ K  +S  G+  ++    IPLD++P I+L  P++    FR    LW S+T
Sbjct: 18  TRNQSKEDESRLGKIFEL----IPLDMIPDILLRLPAKSAVRFRIVSKLWLSIT 67


>sp|Q04G44|G6PI_OENOB Glucose-6-phosphate isomerase OS=Oenococcus
           oeni (strain BAA-331 / PSU-1) GN=pgi PE=3 SV=1
          Length = 438

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 395 LGVLFIDSVINSEFHPEFFRKLGCPRSFFFGENATNNYV 279
           LG   +   + SEFH E   K G P  +F G +A+  Y+
Sbjct: 85  LGARAVIEFLKSEFHNEKANKEGLPEVYFVGTSASGRYI 123


>sp|Q9CSB4|PAR3L_MOUSE Partitioning defective 3 homolog B OS=Mus
           musculus GN=Pard3b PE=1 SV=2
          Length = 1203

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 281 VPRSSRKQMRPSSLTLLGPRAKRKIKKNSLSLKRG 177
           VPR  RK   PS   L+G  +K+  KK  + LK+G
Sbjct: 355 VPRLGRKPSSPSLSPLMGFGSKKNAKKIKIDLKKG 389


>sp|Q01954|BNC1_HUMAN Zinc finger protein basonuclin-1 OS=Homo
           sapiens GN=BNC1 PE=1 SV=2
          Length = 994

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = -2

Query: 365 NSEFHPEFFRKLGCPRSFFFGENATNNYVPRSSRKQMRPSSLTLLGPRAKRKIKKNSLSL 186
           ++ F  E  + L CP +    E++T+     SS   +     T L P AK K ++NSL  
Sbjct: 294 STPFQVEKDQCLNCPDAITKKEDSTH-LSDSSSYNIVTKFERTQLSPEAKVKPERNSLGT 352

Query: 185 KRGRPY 168
           K+GR +
Sbjct: 353 KKGRVF 358


>sp|Q5XM24|APRA_DICDI Autocrine proliferation repressor
           OS=Dictyostelium discoideum GN=aprA PE=1 SV=1
          Length = 494

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 129 SIVLFNPSQIVSSFRQNLWSSVTDSTDSPDIRTISIIKIT 10
           +IVL  P   +  ++  +W++VT+ST   D R I+ + IT
Sbjct: 362 TIVLTVPEGGIIPYKVKVWTAVTESTTRRDFRIITCMDIT 401


>sp|Q9SS35|FB137_ARATH Putative F-box protein At3g10240
           OS=Arabidopsis thaliana GN=At3g10240 PE=4 SV=1
          Length = 389

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -1

Query: 207 KEKFSKSETGQTIQIYIACIPLDLVPSIVLFNPSQIVSSFR--QNLWSSVT 61
           + K  +S++G +       IPLDLV  I+L  P + V+ FR     WSS+T
Sbjct: 14  QRKSKRSKSGSS------SIPLDLVSEILLRLPEKSVARFRCVSKPWSSIT 58

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945322|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_P03, 5'
         (420 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SRQ1|A9SRQ1_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.22 
tr|B6WFA3|B6WFA3_9BACE Putative uncharacterized protein OS=Bacte...    35   1.4  
tr|Q64PK6|Q64PK6_BACFR Putative uncharacterized protein OS=Bacte...    33   9.2  

>tr|A9SRQ1|A9SRQ1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_134160 PE=4 SV=1
          Length = 562

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = +2

Query: 14  ILMIEIVLISGESVESVTDDQRFCLKLLTI*EGLNKTIDGT 136
           +L IE+ LIS + VE VTDD++   K+LT  EG  K  DG+
Sbjct: 254 VLEIELELISWKVVEEVTDDKKVIKKILTAGEGYEKPNDGS 294


>tr|B6WFA3|B6WFA3_9BACE Putative uncharacterized protein
           OS=Bacteroides finegoldii DSM 17565 GN=BACFIN_01175 PE=4
           SV=1
          Length = 1135

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 322 PGHFFLGRMQPIIMYQDLLGNRCGQAHLPYWARAPNE 212
           PG++FL RMQPI   + LL        L  W  APNE
Sbjct: 240 PGNYFLSRMQPIENARPLLLGNIANLFLDEWIHAPNE 276


>tr|Q64PK6|Q64PK6_BACFR Putative uncharacterized protein
           OS=Bacteroides fragilis GN=BF3833 PE=4 SV=1
          Length = 204

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 138 LVPSIVLFNPSQIVSSFRQNLWSSVTDSTDSPDIRTISIIKITYLD 1
           LV + +LFNP+    +     W  +TDS +   +RT  + K  Y +
Sbjct: 126 LVENCLLFNPTDPFQNLNATYWGLITDSNECYTVRTPEVCKRVYFN 171