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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945347
Clone id YMU02A01NGRL0009_A08
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_A08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGGAGCTCAGGCCACAGCACC
GCTCTCTTCTCCTGAGCATTCTCTCTTCTGCAGGACGATTGTAGTTCTTGCTCCTGCTAA
ATTCACGTAGTCAAGCAGTGGCGACCATGTCTGCGTCTCTAGCAATGAGCGCCCCGGGAT
GTGCCCCAGCAGAGCTGAGCCTCTCACATAATAGCTTCTCGGGCCTCAAGGCCTCCACCA
TCGTCGCGCCCAAGTGTGGCAATCCCCTCTCCGTTTCCAATGGCAGCCGTGTCAGCGCCA
TGCTGGTGTGGAAGCCGTACGACAACAAGAAGTTCGAGACTCTGTCATATCTGCCGCAGC
TGAGTAGCGAGCAGATTGCACAGCAGGTGGACTACATGGTGCGACAGAACTTTACTCCCT
GCATCGAGTTCGACAACATTGGGAGCGTGTACCGGGAGCACTTCCACGGGAGCGGGTACT
ACGATCGGAGGTACTGGGTGATGTGGAAGCTGCCCATGTATGGCTGCACCGACTCCGCCG
CCGTGCTGCGCGAGATCACGGAGTGCGCCTAG
■■Homology search results ■■ -
sp_hit_id O64416
Definition sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea
Align length 147
Score (bit) 146.0
E-value 5.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945347|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_A08, 5'
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   146   5e-35
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   144   3e-34
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   142   8e-34
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   141   2e-33
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   141   2e-33
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   141   2e-33
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   141   2e-33
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   140   4e-33
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha...   139   7e-33
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   139   9e-33
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   139   9e-33
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   138   2e-32
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   138   2e-32
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   137   3e-32
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   137   3e-32
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   137   4e-32
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   136   7e-32
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   136   7e-32
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   135   2e-31
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   134   2e-31
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   134   4e-31
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   134   4e-31
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   133   5e-31
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   133   6e-31
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   133   6e-31
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   133   6e-31
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   132   8e-31
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   132   8e-31

>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  146 bits (369), Expect = 5e-35
 Identities = 74/147 (50%), Positives = 96/147 (65%), Gaps = 4/147 (2%)
 Frame = +2

Query: 98  VATMSASLAMSAPGCAPAELSLSHNSF----SGLKASTIVAPKCGNPLSVSNGSRVSAML 265
           +A++ AS A+  P  A A  +   +      +GLKA            + +NGSRVS M 
Sbjct: 1   MASVVASAAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQ 60

Query: 266 VWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHGSGYYD 445
           VW+PY+N KFETLSYLP LS + +A+Q+DY+++  + PCIEFD  G+V RE     GYYD
Sbjct: 61  VWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTREGSTMPGYYD 120

Query: 446 RRYWVMWKLPMYGCTDSAAVLREITEC 526
            RYW MWKLPM+GCTDSA+VLREI EC
Sbjct: 121 GRYWTMWKLPMFGCTDSASVLREIEEC 147


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  144 bits (362), Expect = 3e-34
 Identities = 73/151 (48%), Positives = 96/151 (63%), Gaps = 5/151 (3%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTI--VAPKCGNPLSV--SNGSRVS 256
           S A+AT++ + +  A   AP         F+GLK++    V  K  N  S   SNG RV 
Sbjct: 6   SSAIATVNRTTSTQASLAAP---------FTGLKSNVAFPVTKKANNDFSSLPSNGGRVQ 56

Query: 257 AMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGS 433
            M VW P   KK+ETLSYLP LS E +++++DY++R  + PC+EF+   G VYREH H  
Sbjct: 57  CMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSP 116

Query: 434 GYYDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           GYYD RYW MWKLPM+GCTDSA V++E+ EC
Sbjct: 117 GYYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
           2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
           PE=2 SV=2
          Length = 181

 Score =  142 bits (359), Expect = 8e-34
 Identities = 76/151 (50%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTI--VAPKCGNPLS--VSNGSRVS 256
           S AV T  A   M AP             F+GLK+S    V  K  N ++   SNG RVS
Sbjct: 8   STAVVTSPAQATMVAP-------------FTGLKSSASFPVTRKANNDITSITSNGGRVS 54

Query: 257 AMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGS 433
            M VW P   KKFETLSYLP LS  ++A++VDY++R  + PC+EF+   G VYREH +  
Sbjct: 55  CMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTP 114

Query: 434 GYYDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           GYYD RYW MWKLP++GCTDSA VL+E+ EC
Sbjct: 115 GYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  141 bits (356), Expect = 2e-33
 Identities = 75/149 (50%), Positives = 98/149 (65%), Gaps = 9/149 (6%)
 Frame = +2

Query: 107 MSASLAMSAPGCAPAELSLSHNS----FSGLKASTI--VAPKCGNPLS--VSNGSRVSAM 262
           M+ S+  SA   A +  S + +S    F+ LK+++   V  K  N ++   SNG RV  M
Sbjct: 1   MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCM 60

Query: 263 LVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGSGY 439
            VW P   KKFETLSYLP LSSEQ+A++VDY++R+N  PC+EF+   G VYREH    GY
Sbjct: 61  QVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGY 120

Query: 440 YDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           YD RYW MWKLPM+GC DS+ VL+E+ EC
Sbjct: 121 YDGRYWTMWKLPMFGCNDSSQVLKELEEC 149


>sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2
          Length = 181

 Score =  141 bits (356), Expect = 2e-33
 Identities = 75/151 (49%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTI--VAPKCGNPLS--VSNGSRVS 256
           S AV T  A   M AP             F+GLK+S+   V  K  N ++  VSNG RVS
Sbjct: 8   SAAVVTSPAQATMVAP-------------FTGLKSSSAFPVTRKANNDITSIVSNGGRVS 54

Query: 257 AMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGS 433
            M VW P   KKFETLSYLP L+  ++ ++VDY++R  + PC+EF+   G VYREH    
Sbjct: 55  CMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTP 114

Query: 434 GYYDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           GYYD RYW MWKLP++GCTDSA VL+E+ EC
Sbjct: 115 GYYDGRYWTMWKLPLFGCTDSAQVLKEVQEC 145


>sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small chain
           1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B
           PE=1 SV=1
          Length = 181

 Score =  141 bits (356), Expect = 2e-33
 Identities = 75/151 (49%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTI--VAPKCGNPLS--VSNGSRVS 256
           S AV T  A   M AP             F+GLK+S    V  K  N ++   SNG RVS
Sbjct: 8   SAAVVTSPAQATMVAP-------------FTGLKSSASFPVTRKANNDITSITSNGGRVS 54

Query: 257 AMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGS 433
            M VW P   KKFETLSYLP L+  ++A++VDY++R  + PC+EF+   G VYREH +  
Sbjct: 55  CMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTP 114

Query: 434 GYYDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           GYYD RYW MWKLP++GCTDSA VL+E+ EC
Sbjct: 115 GYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  141 bits (355), Expect = 2e-33
 Identities = 70/145 (48%), Positives = 94/145 (64%), Gaps = 5/145 (3%)
 Frame = +2

Query: 107 MSASLAMSAPGCAPAELSLSHNSFSGLKASTI--VAPKCGNPLS--VSNGSRVSAMLVWK 274
           M++S+  SA   A    +     F+GLK+S       K  N ++   SNG RV+ M VW 
Sbjct: 1   MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60

Query: 275 PYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGSGYYDRR 451
           P   KKFETLSYLP L+  ++A++VDY++R  + PC+EF+   G VYREH +  GYYD R
Sbjct: 61  PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120

Query: 452 YWVMWKLPMYGCTDSAAVLREITEC 526
           YW MWKLP++GCTDSA VL+E+ EC
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEEC 145


>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain
           3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B
           PE=1 SV=2
          Length = 181

 Score =  140 bits (353), Expect = 4e-33
 Identities = 75/151 (49%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTI--VAPKCGNPLS--VSNGSRVS 256
           S AV T  A   M AP             F+GLK+S    V  K    ++   SNG RVS
Sbjct: 8   SAAVVTSPAQATMVAP-------------FTGLKSSAAFPVTRKTNKDITSIASNGGRVS 54

Query: 257 AMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGS 433
            M VW P   KKFETLSYLP LS  ++A++VDY++R  + PC+EF+   G VYREH +  
Sbjct: 55  CMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTP 114

Query: 434 GYYDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           GYYD RYW MWKLP++GCTDSA VL+E+ EC
Sbjct: 115 GYYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145


>sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small chain
           F1, chloroplastic OS=Brassica napus GN=RBCS F1 PE=3 SV=1
          Length = 181

 Score =  139 bits (351), Expect = 7e-33
 Identities = 74/151 (49%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTI--VAPKCGNPLS--VSNGSRVS 256
           S AV T  A   M AP             F+GLK+S    V  K  N ++   SNG RVS
Sbjct: 8   SAAVVTSPAQATMVAP-------------FTGLKSSAAFPVTRKANNDITSIASNGGRVS 54

Query: 257 AMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFD-NIGSVYREHFHGS 433
            M VW P   KKFETLSYLP L+  ++ ++VDY++R  + PC+EF+   G VYREH    
Sbjct: 55  CMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTP 114

Query: 434 GYYDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           GYYD RYW MWKLP++GCTDSA VL+E+ EC
Sbjct: 115 GYYDGRYWTMWKLPLFGCTDSAQVLKEVQEC 145


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  139 bits (350), Expect = 9e-33
 Identities = 60/98 (61%), Positives = 74/98 (75%)
 Frame = +2

Query: 236 SNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYR 415
           SNG RV  M VW P   KKFETLSYLP L+ EQ+ Q+VDY++R  + PCIEF  +G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 416 EHFHGSGYYDRRYWVMWKLPMYGCTDSAAVLREITECA 529
           E+ +  GYYD RYW MWKLPM+GCTDS+ VL+E+ EC+
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECS 146
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 144
Score (bit) 238.0
E-value 2.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945347|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_A08, 5'
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   238   2e-61
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   165   2e-39
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   160   3e-38
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   151   2e-35
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   150   5e-35
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   149   7e-35
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   146   6e-34
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   146   7e-34
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   145   1e-33
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   145   1e-33
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   144   2e-33
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   143   6e-33
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   141   2e-32
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   141   2e-32
tr|Q9SPL1|Q9SPL1_LACSA Ribulose bisphosphate carboxylase small c...   140   4e-32
tr|Q306K0|Q306K0_BRANA Ribulose bisphosphate carboxylase small c...   139   7e-32
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   139   7e-32
tr|A1YN03|A1YN03_BRACM Ribulose bisphosphate carboxylase small c...   139   9e-32
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   139   1e-31

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  238 bits (606), Expect = 2e-61
 Identities = 110/144 (76%), Positives = 129/144 (89%)
 Frame = +2

Query: 98  VATMSASLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLVWKP 277
           +ATM A++A+SAP CA A  SLS  SFSGLKA+T+ APKC NPL++SNGSR+SAMLVWKP
Sbjct: 1   MATMLAAMAVSAPSCAAAAESLS-KSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKP 59

Query: 278 YDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHGSGYYDRRYW 457
           YDNKKFETLSYLP L+++QIA+QV+YMVR+ +TPCIEFD IGSVYREHFHGSGYYD RYW
Sbjct: 60  YDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYW 119

Query: 458 VMWKLPMYGCTDSAAVLREITECA 529
           +MWKLPM+GCTDS +VLREI ECA
Sbjct: 120 IMWKLPMFGCTDSGSVLREIAECA 143


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  166 bits (421), Expect = 5e-40
 Identities = 84/147 (57%), Positives = 99/147 (67%), Gaps = 3/147 (2%)
 Frame = +2

Query: 95  AVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLVWK 274
           A A +S S+  +A   A    S S   FSGLK++T+ A K     SV NGSRV  M VW 
Sbjct: 2   ASAVVSVSIVAAASPAAVCRESSSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWN 61

Query: 275 PYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHG---SGYYD 445
           P    KFET SYLP L+ +QIA+QVD+M++QN  PCIEFD +GSV R +F G   SGYYD
Sbjct: 62  PIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYD 121

Query: 446 RRYWVMWKLPMYGCTDSAAVLREITEC 526
            RYW MWKLPM+GCTDSA VLREI EC
Sbjct: 122 GRYWTMWKLPMFGCTDSAQVLREIQEC 148


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  165 bits (418), Expect = 1e-39
 Identities = 93/175 (53%), Positives = 111/175 (63%), Gaps = 3/175 (1%)
 Frame = +2

Query: 11  PQHRSLLLSILSSAGRXXXXXXXNSRSQAVATMSASLAMSAPGCAPAELSLSHNSFSGLK 190
           P   SL+LS   S  R          S  VA ++   A S  G AP+E S S  +FSGLK
Sbjct: 11  PIRLSLVLSSALSKFRESVAMASAVVSTVVAPVALGGASSCVG-APSESS-SVKAFSGLK 68

Query: 191 ASTIVAPKCGNPLSVSNGSRVSAMLVWKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQN 370
           ++T+ + K     SV NGSRV  M VW P    KFET SYLP L+ +QIA+QVDYM++QN
Sbjct: 69  SATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQN 128

Query: 371 FTPCIEFDNIGSVYREHFHG---SGYYDRRYWVMWKLPMYGCTDSAAVLREITEC 526
             PCIEFD +GSV R +F G   SGYYD RYW MWKLPM+GCTDS+ VLREI EC
Sbjct: 129 LIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQEC 183


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  165 bits (417), Expect = 2e-39
 Identities = 83/147 (56%), Positives = 99/147 (67%), Gaps = 3/147 (2%)
 Frame = +2

Query: 95  AVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLVWK 274
           A A +S S+  +A   +    S S   FSGLK++T+ A K     SV NGSRV  M VW 
Sbjct: 2   ASAVVSVSIVAAASPASVCRESSSVKQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWN 61

Query: 275 PYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHG---SGYYD 445
           P    KFET SYLP L+ +QIA+QVD+M++QN  PCIEFD +GSV R +F G   SGYYD
Sbjct: 62  PIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYD 121

Query: 446 RRYWVMWKLPMYGCTDSAAVLREITEC 526
            RYW MWKLPM+GCTDSA VLREI EC
Sbjct: 122 GRYWTMWKLPMFGCTDSAQVLREIQEC 148


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  164 bits (414), Expect = 3e-39
 Identities = 84/149 (56%), Positives = 102/149 (68%), Gaps = 3/149 (2%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLV 268
           S  VA +S ++A S+   A +  S S  +FSGLK++T+   K     SV NGSRV  M V
Sbjct: 7   STVVAPVSVTVASSS--VAASRESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQV 64

Query: 269 WKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHG---SGY 439
           W P    KFET SYLP LS +QIA+QVDYM++QN  PCIEFD +G+V R +F G   SGY
Sbjct: 65  WNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGY 124

Query: 440 YDRRYWVMWKLPMYGCTDSAAVLREITEC 526
           YD RYW MWKLPM+GCTDS+ VLREI EC
Sbjct: 125 YDGRYWTMWKLPMFGCTDSSQVLREIQEC 153


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  160 bits (406), Expect = 3e-38
 Identities = 79/140 (56%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
 Frame = +2

Query: 116 SLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLVWKPYDNKKF 295
           SLA ++P     + S S  +FSGLK++T+ + +     SV NGSRV  M VW P    KF
Sbjct: 14  SLAAASPAAVSRD-STSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKF 72

Query: 296 ETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHG---SGYYDRRYWVMW 466
           ET SYLP L+ ++IA+QVDYM++QN  PCIEFD +GSV R +F G   SGYYD RYW MW
Sbjct: 73  ETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMW 132

Query: 467 KLPMYGCTDSAAVLREITEC 526
           KLPM+GCTDS+ VLREI EC
Sbjct: 133 KLPMFGCTDSSQVLREIQEC 152


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score =  160 bits (405), Expect = 4e-38
 Identities = 83/148 (56%), Positives = 101/148 (68%), Gaps = 3/148 (2%)
 Frame = +2

Query: 89  SQAVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLV 268
           S  VA +S ++A S+   A +  S S  +FSGLK++T+   K     SV NGSRV  M V
Sbjct: 11  STVVAPVSVTVASSS--VAASRESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQV 68

Query: 269 WKPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHG---SGY 439
           W P    KFET SYLP LS +QIA+QVDYM++QN  PCIEFD +G+V R +F G   SGY
Sbjct: 69  WNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGY 128

Query: 440 YDRRYWVMWKLPMYGCTDSAAVLREITE 523
           YD RYW MWKLPM+GCTDS+ VLREI E
Sbjct: 129 YDGRYWTMWKLPMFGCTDSSQVLREIQE 156


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  160 bits (405), Expect = 4e-38
 Identities = 79/140 (56%), Positives = 96/140 (68%), Gaps = 3/140 (2%)
 Frame = +2

Query: 116 SLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLVWKPYDNKKF 295
           SL  +A   A +  S +  +FSGLK +T+ + K     +V NGSRV  M VW P    KF
Sbjct: 14  SLGAAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKF 73

Query: 296 ETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHG---SGYYDRRYWVMW 466
           ET SYLP L+ +QIA+QVDYM++QN  PCIEFD +GSV R +F G   SGYYD RYW MW
Sbjct: 74  ETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMW 133

Query: 467 KLPMYGCTDSAAVLREITEC 526
           KLPM+GCTDS+ VLREI EC
Sbjct: 134 KLPMFGCTDSSQVLREIQEC 153


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  151 bits (381), Expect = 2e-35
 Identities = 74/144 (51%), Positives = 92/144 (63%)
 Frame = +2

Query: 95  AVATMSASLAMSAPGCAPAELSLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLVWK 274
           A A ++ +   +A   A    S +  +FSGLK++T+ + K  N  SV NGSRV  M VW 
Sbjct: 7   ASAVVAPTAFAAASPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWN 66

Query: 275 PYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHGSGYYDRRY 454
           P    KFET SYLP LS + IA+QV+YM++Q   PC+EFDN   V R +    GYYD RY
Sbjct: 67  PIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRY 126

Query: 455 WVMWKLPMYGCTDSAAVLREITEC 526
           W MWKLPM+GC DSA VLREI EC
Sbjct: 127 WTMWKLPMFGCQDSAQVLREIEEC 150


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  150 bits (379), Expect = 4e-35
 Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = +2

Query: 95  AVATMSASLAMSAPGCAPAEL-SLSHNSFSGLKASTIVAPKCGNPLSVSNGSRVSAMLVW 271
           A +T+ A  A +A   A +   S S  +FSGLK+ST+ + K  +  SV NGSRV  M VW
Sbjct: 6   ATSTVVAPAAFAASSSAVSTSESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVW 65

Query: 272 KPYDNKKFETLSYLPQLSSEQIAQQVDYMVRQNFTPCIEFDNIGSVYREHFHGSGYYDRR 451
            P    KFET SYLP LS + IA+QVDYM++Q   PC+EFDN   V R +    GYYD R
Sbjct: 66  NPIGMTKFETFSYLPPLSDDAIAKQVDYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGR 125

Query: 452 YWVMWKLPMYGCTDSAAVLREITEC 526
           YW MWKLPM+GC D A VLREI EC
Sbjct: 126 YWTMWKLPMFGCQDPAQVLREIEEC 150