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NBDC - LSDB Archive
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DK945361
Clone id YMU02A01NGRL0009_A23
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_A23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GGCTCTAGCTACAGCAGCCCCAATTATGGCTCTGGCTATGGAAGTCCCAGCTATGGGAGC
TCTGGCTACGGGAGGTCGTCGTATGGAGGTGGTTCAACTTTTGGAACTCCAAGGGGATAC
AGAATTTATGTAGGAAACTTGCCATGGTCTAGTGATGACATGAGCCTTGGTCAGCTGTTT
GGTGCACACGGTACTGTGTTAGAGGCCAGAGTTATGCGAGAACGTGATACTGGAAGATCT
AGAGGATTTGGGTTTGTTTCAATGTCTTCACCTGAGGAAATGTGTGCTGCAATTGGTGCC
CTTGATGGTTACCAAGTGGATGGGCGCTCAATAAAAGTGAACGAGGCTGAAAGATGAGAT
ATTGATGAAAAGAGATAGTAATTGTCGCAATACTGGCAGCCTCCCCTTTTTTTGTACTCG
TAGGTGGGTGAATACAGCATGGGAATACATAATACAAAAAAAAAAAAGTAAAAAAAAAAA
AAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P19683
Definition sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris
Align length 80
Score (bit) 102.0
E-value 6.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945361|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_A23, 5'
         (455 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...   102   6e-22
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...   100   2e-21
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...   100   4e-21
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    99   1e-20
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    97   3e-20
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    95   1e-19
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    91   2e-18
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    91   2e-18
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    85   2e-16
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    85   2e-16
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S...    83   5e-16
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi...    82   1e-15
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind...    81   2e-15
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    80   3e-15
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ...    80   3e-15
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S...    79   7e-15
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra...    78   2e-14
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    75   1e-13
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho...    75   1e-13
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi...    75   1e-13
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae...    71   2e-12
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae...    70   3e-12
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech...    69   1e-11
sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 OS=Homo sapi...    68   2e-11
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae...    67   4e-11
sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus muscu...    67   4e-11
sp|P41891|GAR2_SCHPO Protein gar2 OS=Schizosaccharomyces pombe G...    67   4e-11
sp|Q29RT0|HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G ...    67   5e-11
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong...    67   5e-11
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo...    67   5e-11

>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 315

 Score =  102 bits (255), Expect = 6e-22
 Identities = 49/80 (61%), Positives = 60/80 (75%)
 Frame = +1

Query: 112 RGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAA 291
           + YRIYVGN+PW  DD  L QLF  HG V+ ARV+ +R+TGRSRGFGFV+M+S  EM  A
Sbjct: 228 QSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDA 287

Query: 292 IGALDGYQVDGRSIKVNEAE 351
           I  LDG  +DGR+I+VN AE
Sbjct: 288 IANLDGQSLDGRTIRVNVAE 307



 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 37/82 (45%), Positives = 51/82 (62%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   +++VGNLP+  D   L +LF   G V  A V+  RDT +SRGFGFV+MS+ EE   
Sbjct: 133 PEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEK 192

Query: 289 AIGALDGYQVDGRSIKVNEAER 354
           A+   + Y V+GR + VN+A R
Sbjct: 193 AVEMYNRYDVNGRLLTVNKAAR 214


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score =  100 bits (250), Expect = 2e-21
 Identities = 48/78 (61%), Positives = 59/78 (75%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           YRIYVGN+PW  DD  L Q+F  HG V+ ARV+ +R++GRSRGFGFV+MSS  EM  AI 
Sbjct: 191 YRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIA 250

Query: 298 ALDGYQVDGRSIKVNEAE 351
            LDG  +DGR+I+VN AE
Sbjct: 251 NLDGQTLDGRTIRVNAAE 268



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +++VGNLP+  D   L QLF   G V  A V+  R+T RSRGFGFV+MS+ EE   A+  
Sbjct: 98  KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157

Query: 301 LDGYQVDGRSIKVNEA 348
              Y ++GR + VN+A
Sbjct: 158 YSQYDLNGRLLTVNKA 173


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score =  100 bits (248), Expect = 4e-21
 Identities = 47/78 (60%), Positives = 61/78 (78%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           +R+YVGNLPW  D+  L QLF  HG V+EARV+ +R+TGRSRGFGFV+MS  +E+  AI 
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303

Query: 298 ALDGYQVDGRSIKVNEAE 351
           ALDG  ++GR+I+VN AE
Sbjct: 304 ALDGQNLEGRAIRVNVAE 321



 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +++VGNL +  +  +L  LF   GTV  A V+  R+T +SRGFGFV+MSS +E   A+  
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210

Query: 301 LDGYQVDGRSIKVNEA 348
            + Y ++GR + VN+A
Sbjct: 211 FNRYDLNGRLLTVNKA 226


>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 47/77 (61%), Positives = 58/77 (75%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           R+YVGNLPW  D   L QLF  HG V+ ARV+ +R+TGRSRGFGFV+MSS  E+  AI A
Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209

Query: 301 LDGYQVDGRSIKVNEAE 351
           LDG  +DGR+++VN AE
Sbjct: 210 LDGQTLDGRAVRVNVAE 226



 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   +++VGNLP+  D   L  +F A G V  A V+  R+T RSRGFGFV+MS+ EE   
Sbjct: 52  PEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 111

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+  L+GY +DGR + VN+A
Sbjct: 112 AVELLNGYDMDGRQLTVNKA 131


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 46/83 (55%), Positives = 63/83 (75%)
 Frame = +1

Query: 103 GTPRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEM 282
           G+  G R+YVGNL W  DDM+L  LF   G V+EARV+ +RD+GRS+GFGFV++SS +E+
Sbjct: 252 GSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEV 311

Query: 283 CAAIGALDGYQVDGRSIKVNEAE 351
             AI +L+G  +DGR I+V+EAE
Sbjct: 312 QKAINSLNGADLDGRQIRVSEAE 334



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 33/74 (44%), Positives = 50/74 (67%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +++VGNL ++ D   L QLF + G V    V+ ++ TGRSRGFGFV+MS+  E+ AA   
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 301 LDGYQVDGRSIKVN 342
            +GY+ +GR ++VN
Sbjct: 160 FNGYEFEGRPLRVN 173


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 46/83 (55%), Positives = 60/83 (72%)
 Frame = +1

Query: 103 GTPRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEM 282
           G   G R+YVGNL W  DDM+L  LF   G V+EARV+ +RD+GRS+GFGFV+  S +E+
Sbjct: 199 GAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEV 258

Query: 283 CAAIGALDGYQVDGRSIKVNEAE 351
             AI +LDG  +DGR I+V+EAE
Sbjct: 259 QNAIKSLDGADLDGRQIRVSEAE 281



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 36/74 (48%), Positives = 52/74 (70%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +++VGNLP++ D   L QLF + G V    V+ ++ TGRSRGFGFV+MSS  E+ AA   
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 301 LDGYQVDGRSIKVN 342
            +GY++DGR ++VN
Sbjct: 152 FNGYELDGRPLRVN 165


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
 Frame = +1

Query: 97  TFGTPRG-------YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGF 255
           +FG  RG        R+YVGNL W  DD++L +LF   G V++A+V+ +RD+GRSRGFGF
Sbjct: 193 SFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 252

Query: 256 VSMSSPEEMCAAIGALDGYQVDGRSIKVNEAE 351
           V+ SS +E+  AI +L+G  +DGRSI+V+ AE
Sbjct: 253 VTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAE 284



 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/74 (50%), Positives = 53/74 (71%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +++VGNLP+S D  +L  LF   G V    V+ ++ TGRSRGFGFV+MS+ EE+ AA   
Sbjct: 88  KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147

Query: 301 LDGYQVDGRSIKVN 342
            +GY++DGR+I+VN
Sbjct: 148 FNGYEIDGRAIRVN 161


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
 Frame = +1

Query: 97  TFGTPRG-------YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGF 255
           +FG  RG        R+YVGNL W  DD++L +LF   G V++A+V+ +RD+GRSRGFGF
Sbjct: 194 SFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 253

Query: 256 VSMSSPEEMCAAIGALDGYQVDGRSIKVNEAE 351
           V+ SS +E+  AI +L+G  +DGRSI+V+ AE
Sbjct: 254 VTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAE 285



 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 36/74 (48%), Positives = 53/74 (71%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +++VGNLP+S D  +L  LF   G V    V+ ++ +GRSRGFGFV+MS+ EE+ AA   
Sbjct: 89  KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQ 148

Query: 301 LDGYQVDGRSIKVN 342
            +GY++DGR+I+VN
Sbjct: 149 FNGYEIDGRAIRVN 162


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 41/77 (53%), Positives = 57/77 (74%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           R+YVGNL W  D  +L  LF   G V++A+V+ +RD+GRSRGFGFV+ SS EE+  AI +
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248

Query: 301 LDGYQVDGRSIKVNEAE 351
           LDG  ++GR+I+V+ AE
Sbjct: 249 LDGVDLNGRAIRVSPAE 265



 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 38/74 (51%), Positives = 55/74 (74%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +I+VGNLP+S+D  +L +LF   G V    V+ ++ TGRSRGFGFV+MSS EE+ AA   
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 301 LDGYQVDGRSIKVN 342
            +GY++DGR+++VN
Sbjct: 148 FNGYELDGRALRVN 161


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 41/77 (53%), Positives = 57/77 (74%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           R+YVGNL W  D  +L  LF   G V++A+V+ +RD+GRSRGFGFV+ SS EE+  AI +
Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 254

Query: 301 LDGYQVDGRSIKVNEAE 351
           LDG  ++GR+I+V+ AE
Sbjct: 255 LDGVDLNGRAIRVSPAE 271



 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/74 (50%), Positives = 54/74 (72%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +I+VGNL +S+D  +L +LF   G V    V+ ++ TGRSRGFGFV+MSS EE+ AA   
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 301 LDGYQVDGRSIKVN 342
            +GY++DGR+++VN
Sbjct: 148 FNGYELDGRALRVN 161
tr_hit_id A9NTU4
Definition tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 77
Score (bit) 104.0
E-value 3.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945361|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_A23, 5'
         (455 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...   104   3e-21
tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subs...   102   7e-21
tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza...   102   7e-21
tr|A6N0D0|A6N0D0_ORYSI Chloroplast 28 kDa ribonucleoprotein (Fra...   102   7e-21
tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum c...   102   1e-20
tr|Q8SMH8|Q8SMH8_PERAE RNA-binding protein OS=Persea americana G...   101   2e-20
tr|O81987|O81987_HORVU Cp31AHv protein OS=Hordeum vulgare PE=2 SV=1   101   2e-20
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb...   101   2e-20
tr|A9NWK5|A9NWK5_PICSI Putative uncharacterized protein OS=Picea...   101   2e-20
tr|A9NVB2|A9NVB2_PICSI Putative uncharacterized protein OS=Picea...   101   2e-20
tr|A7PLZ2|A7PLZ2_VITVI Chromosome chr14 scaffold_21, whole genom...   101   2e-20
tr|Q41834|Q41834_MAIZE Putative uncharacterized protein OS=Zea m...   100   4e-20
tr|O23798|O23798_WHEAT Ps16 protein OS=Triticum aestivum PE=2 SV=1    100   4e-20
tr|A9PG08|A9PG08_POPTR Putative uncharacterized protein OS=Popul...   100   4e-20
tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thalia...   100   5e-20
tr|Q39209|Q39209_ARATH RNA binding protein (Fragment) OS=Arabido...   100   5e-20
tr|B6TBK4|B6TBK4_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1         99   1e-19
tr|Q9FGS0|Q9FGS0_ARATH RNA-binding protein-like (AT5g50250/K6A12...    99   1e-19
tr|A7PCN3|A7PCN3_VITVI Chromosome chr17 scaffold_12, whole genom...    97   3e-19
tr|A5B9G1|A5B9G1_VITVI Putative uncharacterized protein OS=Vitis...    97   3e-19
tr|Q0WMG6|Q0WMG6_ARATH 31 kDa RNA binding protein (Fragment) OS=...    97   4e-19
tr|Q8SMH7|Q8SMH7_PERAE RNA-binding protein OS=Persea americana G...    96   7e-19
tr|Q6ZJ16|Q6ZJ16_ORYSJ Os08g0557100 protein OS=Oryza sativa subs...    96   7e-19
tr|Q6ZJ15|Q6ZJ15_ORYSJ Nucleic acid-binding protein-like OS=Oryz...    96   7e-19
tr|Q0Q6S3|Q0Q6S3_LILLO GRSF OS=Lilium longiflorum GN=GRSF PE=2 SV=1    96   7e-19
tr|A2YY14|A2YY14_ORYSI Putative uncharacterized protein OS=Oryza...    96   7e-19
tr|O81988|O81988_HORVU Cp31BHv OS=Hordeum vulgare PE=2 SV=1            96   1e-18
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...    95   2e-18
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...    95   2e-18
tr|B6TAI9|B6TAI9_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1         95   2e-18

>tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 299

 Score =  104 bits (259), Expect = 3e-21
 Identities = 48/77 (62%), Positives = 63/77 (81%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           R++VGNLPW +DD+SL QLF  HG V+EA+V+ +R+TGRSRGFGFV++SSP+E+  AI +
Sbjct: 217 RVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISS 276

Query: 301 LDGYQVDGRSIKVNEAE 351
           LDG  +DGR IKV  AE
Sbjct: 277 LDGSDMDGRQIKVTLAE 293



 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +++VGNLPWS D   L +LF   G V    V+ +R TGRSRGF FV+M++  +   A+  
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173

Query: 301 LDGYQVDGRSIKVN 342
            +GY+  GR+++VN
Sbjct: 174 FNGYEYQGRTLRVN 187


>tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0070E11.5 PE=2 SV=1
          Length = 322

 Score =  102 bits (255), Expect = 7e-21
 Identities = 48/78 (61%), Positives = 62/78 (79%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           +RIYVGNLPW  DD  L QLF  HG V++ARV+ +R+TGRSRGFGFV+M++ EE+  AI 
Sbjct: 237 FRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIA 296

Query: 298 ALDGYQVDGRSIKVNEAE 351
           ALDG  +DGR+++VN AE
Sbjct: 297 ALDGQSLDGRALRVNVAE 314



 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 38/80 (47%), Positives = 49/80 (61%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   ++YVGNLP+  D   L QLF   G V  + V+  R+T RSRGFGFV+MS+ EE   
Sbjct: 140 PEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEK 199

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+     Y VDGR + VN+A
Sbjct: 200 AVEMFHRYDVDGRLLTVNKA 219


>tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32419 PE=4 SV=1
          Length = 322

 Score =  102 bits (255), Expect = 7e-21
 Identities = 48/78 (61%), Positives = 62/78 (79%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           +RIYVGNLPW  DD  L QLF  HG V++ARV+ +R+TGRSRGFGFV+M++ EE+  AI 
Sbjct: 237 FRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIA 296

Query: 298 ALDGYQVDGRSIKVNEAE 351
           ALDG  +DGR+++VN AE
Sbjct: 297 ALDGQSLDGRALRVNVAE 314



 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 38/80 (47%), Positives = 49/80 (61%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   ++YVGNLP+  D   L QLF   G V  + V+  R+T RSRGFGFV+MS+ EE   
Sbjct: 140 PEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEK 199

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+     Y VDGR + VN+A
Sbjct: 200 AVEMFHRYDVDGRLLTVNKA 219


>tr|A6N0D0|A6N0D0_ORYSI Chloroplast 28 kDa ribonucleoprotein
           (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 186

 Score =  102 bits (255), Expect = 7e-21
 Identities = 48/78 (61%), Positives = 62/78 (79%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           +RIYVGNLPW  DD  L QLF  HG V++ARV+ +R+TGRSRGFGFV+M++ EE+  AI 
Sbjct: 101 FRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIA 160

Query: 298 ALDGYQVDGRSIKVNEAE 351
           ALDG  +DGR+++VN AE
Sbjct: 161 ALDGQSLDGRALRVNVAE 178



 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 38/80 (47%), Positives = 49/80 (61%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   ++YVGNLP+  D   L QLF   G V  + V+  R+T RSRGFGFV+MS+ EE   
Sbjct: 4   PEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEK 63

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+     Y VDGR + VN+A
Sbjct: 64  AVEMFHRYDVDGRLLTVNKA 83


>tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum
           crystallinum PE=2 SV=1
          Length = 289

 Score =  102 bits (253), Expect = 1e-20
 Identities = 48/78 (61%), Positives = 60/78 (76%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           +R+YVGNLPW  DD  L Q+F  HG VL ARV+ +R+TGRSRGF FV+M+S  EM  AIG
Sbjct: 205 FRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAIG 264

Query: 298 ALDGYQVDGRSIKVNEAE 351
           ALDG  ++GR+I+VN AE
Sbjct: 265 ALDGQTLEGRAIRVNVAE 282



 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 35/80 (43%), Positives = 50/80 (62%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   +++VGNLP+  D   L Q+F   G V  A V+  R+T RSRGFGFV+MS+ EE   
Sbjct: 108 PEDAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 167

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+     ++V+GR + VN+A
Sbjct: 168 AVELYHKFEVNGRFLTVNKA 187


>tr|Q8SMH8|Q8SMH8_PERAE RNA-binding protein OS=Persea americana
           GN=rbp33 PE=2 SV=1
          Length = 300

 Score =  101 bits (252), Expect = 2e-20
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           +R+YVGNLPW  DD  L Q+F  HG V+EARV+ +R+TGRSRGFGFV+MS+  E+  AI 
Sbjct: 215 FRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIA 274

Query: 298 ALDGYQVDGRSIKVNEAE 351
           ALDG  +DGR+I+VN AE
Sbjct: 275 ALDGQSLDGRAIRVNVAE 292



 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 35/80 (43%), Positives = 52/80 (65%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   +++VGNLP+  D  +L +LF   GTV  A V+  R+T +SRGFGFV+MS+ EE   
Sbjct: 118 PEEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEK 177

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+   + Y ++GR + VN+A
Sbjct: 178 AVEMFNRYDINGRLLTVNKA 197


>tr|O81987|O81987_HORVU Cp31AHv protein OS=Hordeum vulgare PE=2 SV=1
          Length = 294

 Score =  101 bits (252), Expect = 2e-20
 Identities = 47/78 (60%), Positives = 62/78 (79%)
 Frame = +1

Query: 118 YRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIG 297
           +RIYVGNLPW  DD  L +LF  HG V++A+V+ +RDTGRSRGFGFV+M+S EE+  AI 
Sbjct: 210 FRIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDAIA 269

Query: 298 ALDGYQVDGRSIKVNEAE 351
           ALDG  ++GR+++VN AE
Sbjct: 270 ALDGQSLEGRALRVNVAE 287



 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   ++YVGNLP+  D   L QLF   G V  + V+  R+T +SRGFGFV+MS+ EE   
Sbjct: 113 PEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEK 172

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+     Y V+GR + VN+A
Sbjct: 173 AVEMFHRYDVNGRLLTVNKA 192


>tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein
           OS=Mesembryanthemum crystallinum PE=2 SV=1
          Length = 306

 Score =  101 bits (251), Expect = 2e-20
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           R+YVGNLPW  D+  L Q+F  HG VL ARV+ +R+TGRSRGFGFVSM+S  EM  AI A
Sbjct: 223 RVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAA 282

Query: 301 LDGYQVDGRSIKVNEAE 351
           LDG  +DGR+I+VN AE
Sbjct: 283 LDGQTLDGRAIRVNVAE 299



 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 36/80 (45%), Positives = 52/80 (65%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   +++VGNLP+  D   L Q+F   G V  A V+  R+T RSRGFGFV+MS+ EE   
Sbjct: 125 PEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 184

Query: 289 AIGALDGYQVDGRSIKVNEA 348
           A+  L+G+ ++GR + VN+A
Sbjct: 185 AVEMLNGFDMNGRLLTVNKA 204


>tr|A9NWK5|A9NWK5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 290

 Score =  101 bits (251), Expect = 2e-20
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +IYVGNLPW +DD SL QLF  HG VLEARV+ +R+TGRSRGFGFV+ SS  E+  AI A
Sbjct: 208 KIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAA 267

Query: 301 LDGYQVDGRSIKVNEAE 351
           LDG  +DGR ++VN AE
Sbjct: 268 LDGTDMDGRPLRVNIAE 284



 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 32/80 (40%), Positives = 53/80 (66%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P   +++VGNLP++ D+  LG+LF   G VL+  ++ +R+TG SRGFGFV+M + EE   
Sbjct: 110 PEWTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEK 169

Query: 289 AIGALDGYQVDGRSIKVNEA 348
            +   + + ++GR + VN+A
Sbjct: 170 GVELFNRHSLEGRLLTVNKA 189


>tr|A9NVB2|A9NVB2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 290

 Score =  101 bits (251), Expect = 2e-20
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = +1

Query: 121 RIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCAAIGA 300
           +IYVGNLPW +DD SL QLF  HG VLEARV+ +R+TGRSRGFGFV+ SS  E+  AI A
Sbjct: 208 KIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAA 267

Query: 301 LDGYQVDGRSIKVNEAE 351
           LDG  +DGR ++VN AE
Sbjct: 268 LDGTDMDGRPLRVNIAE 284



 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/80 (41%), Positives = 54/80 (67%)
 Frame = +1

Query: 109 PRGYRIYVGNLPWSSDDMSLGQLFGAHGTVLEARVMRERDTGRSRGFGFVSMSSPEEMCA 288
           P G +++VGNLP++ D+  LG+LF   G VL+  ++ +R+TG SRGFGFV+M + EE   
Sbjct: 110 PEGTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEK 169

Query: 289 AIGALDGYQVDGRSIKVNEA 348
            +   + + ++GR + VN+A
Sbjct: 170 GVELFNRHSLEGRLLTVNKA 189