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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945374
Clone id YMU02A01NGRL0009_B17
Library
Length 473
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_B17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
GTGGACAGAATCGAGAGAGAGAGAGACGAGAGAGAGAGAGAGAGAGACAGATAAAGGGTC
GTGCTTTATCCAAAATGAGGCCAAAGGAGGGCGATGGTGGTTCCGCCTTCCTAGTAGATA
TTGGGACACAGTTGTGAAAATGGTGATTATTGAAGCAATTTGCAAGTGATTAAGGCAGTT
CATGGTATAGAGGCATTGTTGATGATAGGCAACCAAACAAAGAGGGCTGTTTCTCTGTTT
ATCTGCCTTTAGGCTACCTGGTTGTTATGTACCTTGAGCAATCTAGGGCATTAGTATATA
TGCCCCTTGTAAATACCACATGATGCACATATTATTCTTGTGGTTCCTTAATCCTCTTGA
AGTTGGCATTTGCAGGTTTCTCAATTTTGTACTGCAGTATTGCCAAGTGCAAAATTTCAG
GGAAAGGGTGACCAAAGCTTTACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P58170
Definition sp|P58170|OR1D5_HUMAN Olfactory receptor 1D5 OS=Homo sapiens
Align length 57
Score (bit) 32.3
E-value 0.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945374|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_B17, 5'
         (444 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P58170|OR1D5_HUMAN Olfactory receptor 1D5 OS=Homo sapiens GN=...    32   0.90 
sp|Q9TU84|OR1D2_PONPY Olfactory receptor 1D2 OS=Pongo pygmaeus G...    31   2.0  
sp|Q9TU90|OR1D5_GORGO Olfactory receptor 1D5 OS=Gorilla gorilla ...    31   2.6  
sp|P34982|OR1D2_HUMAN Olfactory receptor 1D2 OS=Homo sapiens GN=...    31   2.6  
sp|Q9TU93|OR1D2_GORGO Olfactory receptor 1D2 OS=Gorilla gorilla ...    31   2.6  
sp|Q17760|SRD7_CAEEL Serpentine receptor class delta-7 OS=Caenor...    30   4.5  
sp|Q9TUA8|OR1D2_PANTR Olfactory receptor 1D2 OS=Pan troglodytes ...    30   5.9  
sp|O77830|ADA2B_RABIT Alpha-2B adrenergic receptor (Fragment) OS...    30   6.0  
sp|Q9TUA6|OR1D5_PANTR Olfactory receptor 1D5 OS=Pan troglodytes ...    29   10.0 

>sp|P58170|OR1D5_HUMAN Olfactory receptor 1D5 OS=Homo sapiens
           GN=OR1D5 PE=2 SV=1
          Length = 312

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSCGS-LILLKLAFAGFSILY 392
           GCF    PLG++   Y+   R ++ MP  +    T+ +C S L ++ L +   +++Y
Sbjct: 203 GCFIFLTPLGFMTTSYVRIVRTILQMPSASKKYKTFSTCASHLGVVSLFYGTLAMVY 259


>sp|Q9TU84|OR1D2_PONPY Olfactory receptor 1D2 OS=Pongo pygmaeus
           GN=OR1D2 PE=3 SV=1
          Length = 313

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSCGS-LILLKLAFAGFSILY 392
           GCF   +PLG+++  Y    RA++ +P        + +C S L ++ L +    ++Y
Sbjct: 203 GCFIFLIPLGFMIXSYARIVRAILRIPSATGKYKAFSTCASHLAVVSLFYGTLGMVY 259


>sp|Q9TU90|OR1D5_GORGO Olfactory receptor 1D5 OS=Gorilla gorilla
           gorilla GN=OR1D5 PE=3 SV=1
          Length = 312

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSCGS-LILLKLAFAGFSILY 392
           GCF    PLG++   Y+   R ++ +P  +    T+ +C S L ++ L +   +++Y
Sbjct: 203 GCFIFLTPLGFMTTSYVHIVRTILQIPSASKKYKTFSTCASHLGVVSLFYGTLAMVY 259


>sp|P34982|OR1D2_HUMAN Olfactory receptor 1D2 OS=Homo sapiens
           GN=OR1D2 PE=2 SV=2
          Length = 312

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSCGS 347
           GCF   +P G++++ Y+   RA++ +P V+     + +C S
Sbjct: 203 GCFIFLIPFGFVIISYVLIIRAILRIPSVSKKYKAFSTCAS 243


>sp|Q9TU93|OR1D2_GORGO Olfactory receptor 1D2 OS=Gorilla gorilla
           gorilla GN=OR1D2 PE=3 SV=1
          Length = 312

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSCGS 347
           GCF   +P G++++ Y+   RA++ +P V+     + +C S
Sbjct: 203 GCFIFLIPFGFVIISYVLIIRAILRIPSVSKKYKAFSTCAS 243


>sp|Q17760|SRD7_CAEEL Serpentine receptor class delta-7
           OS=Caenorhabditis elegans GN=srd-7 PE=2 SV=1
          Length = 318

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSC--GSLILLKLAFAGFSILYCS 398
           GCF + L L YL +    ++     + L+N T     +C  G L+  ++  +G S+LY S
Sbjct: 19  GCF-INLFLCYLAIFQSPKAIRTYSLVLINITLTNVGACVTGFLLDQRIIQSGKSMLYVS 77

Query: 399 IAKCKISGKG 428
              C + G+G
Sbjct: 78  YGYCSLLGEG 87


>sp|Q9TUA8|OR1D2_PANTR Olfactory receptor 1D2 OS=Pan troglodytes
           GN=OR1D2 PE=3 SV=1
          Length = 312

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSCGS 347
           GCF   +P G++++ Y+   RA++ +P ++     + +C S
Sbjct: 203 GCFIFLIPFGFVIISYVLIIRAILRIPSLSKKYKAFSTCAS 243


>sp|O77830|ADA2B_RABIT Alpha-2B adrenergic receptor (Fragment)
           OS=Oryctolagus cuniculus GN=ADRA2B PE=3 SV=2
          Length = 394

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
 Frame = -1

Query: 432 VTLSLKFCTWQY---CSTKL-------RNLQMPTSRGLRNHKNNMCIMWYLQGAYILMP* 283
           + L + FCT      C+  L       R L+    R  R  K  +  +W +  A  L P 
Sbjct: 76  LALDVLFCTSSIVHLCAISLDRYWAVSRALEYNCKRTPRRIKCIILTVWLIAAAISLPPL 135

Query: 282 IAQGT*QPGSLKADKQRNSPLCLVAYHQQCLYTMNC-LNHLQIASIITIFTTVSQYLLGR 106
           I +G   P      +   +P C +  +Q+  Y ++  L    +  +I I   +  YL+ +
Sbjct: 136 IYKGDQGP------QPHGAPQCKL--NQEAWYILSSSLGSFFVPCLIMILVYLRIYLIAK 187

Query: 105 RNHHRPPLA 79
           R+H R P A
Sbjct: 188 RSHRRGPRA 196


>sp|Q9TUA6|OR1D5_PANTR Olfactory receptor 1D5 OS=Pan troglodytes
           GN=OR1D5 PE=3 SV=1
          Length = 312

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 225 GCFSVYLPLGYLVVMYLEQSRALVYMPLVNTT*CTYYSCGS-LILLKLAFAGFSILY 392
           GCF    PLG++   Y+   R ++ +P  +     + +C S L ++ L +   +++Y
Sbjct: 203 GCFIFLTPLGFMTTSYVRIVRTILQIPSASKKYKAFSTCASHLGVVSLFYGTLAMVY 259
tr_hit_id Q8HXU8
Definition tr|Q8HXU8|Q8HXU8_CABUN Alpha adrenergic receptor 2B (Fragment) OS=Cabassous unicinctus
Align length 129
Score (bit) 32.7
E-value 9.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945374|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_B17, 5'
         (444 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8HXU8|Q8HXU8_CABUN Alpha adrenergic receptor 2B (Fragment) O...    33   9.1  
tr|Q8HXU3|Q8HXU3_EUPSX Alpha adrenergic receptor 2B (Fragment) O...    33   9.1  
tr|Q8HXU0|Q8HXU0_PRIMA Alpha adrenergic receptor 2B (Fragment) O...    33   9.1  
tr|Q8HXT8|Q8HXT8_TOLMA Alpha adrenergic receptor 2B (Fragment) O...    33   9.1  
tr|Q8HXT5|Q8HXT5_ZAEPI Alpha adrenergic receptor 2B (Fragment) O...    33   9.1  

>tr|Q8HXU8|Q8HXU8_CABUN Alpha adrenergic receptor 2B (Fragment)
           OS=Cabassous unicinctus GN=adra2B PE=3 SV=1
          Length = 383

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
 Frame = -1

Query: 432 VTLSLKFCTWQY---CSTKL-------RNLQMPTSRGLRNHKNNMCIMWYLQGAYILMP* 283
           + L + FCT      C+  L       R L+  + R  R  K  + ++W +  A  L P 
Sbjct: 76  LALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKRIILVVWLIAAAISLPPL 135

Query: 282 IAQGT*QPGSLKADKQRNSPLCLVAYHQQCLYTM-NCLNHLQIASIITIFTTVSQYLLGR 106
           + +G   PG     + R  P C +  +Q+  Y + + +       +I I   +  YL+ R
Sbjct: 136 VYKG--DPGP----QPRGRPQCKL--NQEAWYILASSVGSFFAPCLIMILVYLRIYLIAR 187

Query: 105 RNHHRPPLA 79
           R+H R P A
Sbjct: 188 RSHRRGPRA 196


>tr|Q8HXU3|Q8HXU3_EUPSX Alpha adrenergic receptor 2B (Fragment)
           OS=Euphractus sexcinctus GN=adra2B PE=3 SV=1
          Length = 371

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
 Frame = -1

Query: 432 VTLSLKFCTWQY---CSTKL-------RNLQMPTSRGLRNHKNNMCIMWYLQGAYILMP* 283
           + L + FCT      C+  L       R L+  + R  R  K  + ++W +  A  L P 
Sbjct: 66  LALDVLFCTASIVHLCAISLDRYWAVSRALEYNSRRTPRRVKRVILVVWLIAAAISLPPL 125

Query: 282 IAQGT*QPGSLKADKQRNSPLCLVAYHQQCLYTM-NCLNHLQIASIITIFTTVSQYLLGR 106
           + +G   PG     + R  P C +  +Q+  Y + + +       +I I   +  YL+ R
Sbjct: 126 VYKG--DPGP----QPRGRPQCKL--NQEAWYVLASSVGSFFAPCLIMILVYLRIYLIAR 177

Query: 105 RNHHRPPLA 79
           R+H R P A
Sbjct: 178 RSHRRGPRA 186


>tr|Q8HXU0|Q8HXU0_PRIMA Alpha adrenergic receptor 2B (Fragment)
           OS=Priodontes maximus GN=adra2B PE=3 SV=1
          Length = 373

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
 Frame = -1

Query: 432 VTLSLKFCTWQY---CSTKL-------RNLQMPTSRGLRNHKNNMCIMWYLQGAYILMP* 283
           + L + FCT      C+  L       R L+  + R  R  K  + ++W +  A  L P 
Sbjct: 66  LALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKRIILVVWLIAAAISLPPL 125

Query: 282 IAQGT*QPGSLKADKQRNSPLCLVAYHQQCLYTM-NCLNHLQIASIITIFTTVSQYLLGR 106
           + +G   PG     + R  P C +  +Q+  Y + + +       +I I   +  YL+ R
Sbjct: 126 VYKG--DPGP----QPRGRPQCKL--NQEAWYILASSVGSFFAPCLIMILVYLRIYLIAR 177

Query: 105 RNHHRPPLA 79
           R+H R P A
Sbjct: 178 RSHRRGPRA 186


>tr|Q8HXT8|Q8HXT8_TOLMA Alpha adrenergic receptor 2B (Fragment)
           OS=Tolypeutes matacus GN=adra2B PE=3 SV=1
          Length = 384

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
 Frame = -1

Query: 432 VTLSLKFCTWQY---CSTKL-------RNLQMPTSRGLRNHKNNMCIMWYLQGAYILMP* 283
           + L + FCT      C+  L       R L+  + R  R  K  + ++W +  A  L P 
Sbjct: 76  LALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKRIILVVWLIAAAISLPPL 135

Query: 282 IAQGT*QPGSLKADKQRNSPLCLVAYHQQCLYTM-NCLNHLQIASIITIFTTVSQYLLGR 106
           + +G   PG     + R  P C +  +Q+  Y + + +       +I I   +  YL+ R
Sbjct: 136 VYKG--DPGP----QPRGRPQCKL--NQEAWYILASSVGSFFAPCLIMILVYLRIYLIAR 187

Query: 105 RNHHRPPLA 79
           R+H R P A
Sbjct: 188 RSHRRGPRA 196


>tr|Q8HXT5|Q8HXT5_ZAEPI Alpha adrenergic receptor 2B (Fragment)
           OS=Zaedyus pichiy GN=adra2B PE=3 SV=1
          Length = 383

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
 Frame = -1

Query: 432 VTLSLKFCTWQY---CSTKL-------RNLQMPTSRGLRNHKNNMCIMWYLQGAYILMP* 283
           + L + FCT      C+  L       R L+  + R  R  K  + ++W +  A  L P 
Sbjct: 76  LALDVLFCTASIVHLCAISLDRYWAVSRALEYNSRRTPRRVKRVILVVWLIAAAISLPPL 135

Query: 282 IAQGT*QPGSLKADKQRNSPLCLVAYHQQCLYTM-NCLNHLQIASIITIFTTVSQYLLGR 106
           + +G   PG     + R  P C +  +Q+  Y + + +       +I I   +  YL+ R
Sbjct: 136 VYKG--DPGP----QPRGRPQCKL--NQEAWYVLASSVGSFFAPCLIMILVYLRIYLIAR 187

Query: 105 RNHHRPPLA 79
           R+H R P A
Sbjct: 188 RSHRRGPRA 196