DK945376
Clone id YMU02A01NGRL0009_B19
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_B19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAGTCTCAGCCATGCAGCTTTTAACTCGATCTTCAAACATCGTTCCAGAAATGTCGCTCA
TGGTGTCTGCTACTTGTCCCTCTTTCTCTACCGCCCGTTGCTTACTGCAGCGACAACCTC
CCTTTCTACGCTCGGGCATTGCCGTGCTAACGGCCAAGTCGCCAAAGCGTCAAGCTCCCA
GTTTTGCGATTCCTGAGGACAACGCCGCTGTCGAATCCCCTTCCGATCGTCCTTCGCCTC
TTCCTCCTCCTCCTCCTCAGCAGGACAAAAAGATTCAAGCAAGGGAAGCAGCCCAGAAAG
GACAGACGACAGCTGCAGTGACAGGTGCCATTGCAGTCATACTTGGAGTAGCCTATCTTG
TCTTGGGACAGCTGCTAGATTCTCGTGGTGTAAATCTTGTGCCACCCCCCCCAGAAGCTT
TTGAGCCATAATGATTTTCTGTACTAATCTTTTTGGTTGCATGGCTAGAGAGAAATAGCA
TATTTGACCCCTACATTTTTCTTAAATTGTAGGCATTCTGTAATTTACACGTGGCATACA
CAAGTACCAGTTATTTTCATTCTTTACTTTCTTCGAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5M6W3
Definition sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog OS=Mus musculus
Align length 50
Score (bit) 34.3
E-value 0.46
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945376|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_B19, 5'
(575 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog OS... 34 0.46
sp|Q54G85|PSIJ_DICDI Protein psiJ OS=Dictyostelium discoideum GN... 30 6.6
sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE... 30 6.6

>sp|Q5M6W3|CB063_MOUSE Uncharacterized protein C2orf63 homolog
OS=Mus musculus PE=2 SV=1
Length = 596

Score = 34.3 bits (77), Expect = 0.46
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3

Query: 9 AMQLLTRSSNIVPEMSLMVSATCPSFSTARCLLQ---RQPPFLRSGIAVL 149
AM+ + +S +I + + + CP RCL Q +PPFL G+AVL
Sbjct: 460 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 509


>sp|Q54G85|PSIJ_DICDI Protein psiJ OS=Dictyostelium discoideum
GN=psiJ PE=3 SV=1
Length = 719

Score = 30.4 bits (67), Expect = 6.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2

Query: 118 GCRCSKQRAVEKEGQVADTMSDISGTMFEDRVKSC 14
GC K++ +K+ D+ S I+G F DRVK C
Sbjct: 397 GCSHLKKQCSDKDYCTIDSCSSITGECFFDRVKDC 431


>sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE0570w
OS=Plasmodium falciparum (isolate 3D7) GN=PFE0570w PE=2
SV=1
Length = 10061

Score = 30.4 bits (67), Expect = 6.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1

Query: 410 GGWHKIYTTRI*QLSQDKIGYSKYDCNGTCHCSC 309
G W++IY RI QL Q ++++ C+ +CSC
Sbjct: 2739 GPWYQIYKNRITQLKQ-ATDFNEWKCHRDFYCSC 2771


tr_hit_id B7ZMV8
Definition tr|B7ZMV8|B7ZMV8_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 50
Score (bit) 34.3
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945376|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_B19, 5'
(575 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ZMV8|B7ZMV8_MOUSE Putative uncharacterized protein OS=Mus m... 34 5.0
tr|B2RQ04|B2RQ04_MOUSE RIKEN cDNA 1700034F02 gene OS=Mus musculu... 34 5.0

>tr|B7ZMV8|B7ZMV8_MOUSE Putative uncharacterized protein OS=Mus
musculus PE=2 SV=1
Length = 585

Score = 34.3 bits (77), Expect = 5.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3

Query: 9 AMQLLTRSSNIVPEMSLMVSATCPSFSTARCLLQ---RQPPFLRSGIAVL 149
AM+ + +S +I + + + CP RCL Q +PPFL G+AVL
Sbjct: 449 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 498


>tr|B2RQ04|B2RQ04_MOUSE RIKEN cDNA 1700034F02 gene OS=Mus musculus
GN=1700034F02Rik PE=2 SV=1
Length = 596

Score = 34.3 bits (77), Expect = 5.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3

Query: 9 AMQLLTRSSNIVPEMSLMVSATCPSFSTARCLLQ---RQPPFLRSGIAVL 149
AM+ + +S +I + + + CP RCL Q +PPFL G+AVL
Sbjct: 460 AMEHIQQSKDINTDDLIQLITACPQIDLIRCLTQERNEKPPFLSFGLAVL 509