DK945377 |
Clone id |
YMU02A01NGRL0009_B20 |
Library |
YMU02 |
Length |
648 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_B20. 5' end sequence. |
Accession |
DK945377 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL21Contig1 |
Sequence |
GTACGTTTGCAAAGGAAATTGCCGCCCCTTATGAGCTTGTGAGGCAAACTAAGCAACTTG GGCGCCTTCCAGTGGTAAATTTTGCAGCCGGTGGTGTTGCAACTCCTGCTGACGCAGCTA TGATGATGCAGCTTGGGTGTGACGGTGTGTTTGTTGGGTCTGGTATCTTCAAAAGTGGCA ACCCCTCTCAGCGTGCTCGAGCCATAGTTTCTGCTGTGACTCACTTCAATGACCCTAGCA TTATAGCAGATGTCAGCTGCGGTTTGGGTGAAGCTATGGTGGGTATCAATCTTAATGACA AGAAAGTTGAGCGCTTTGCTGCAAGGTCTGATTAATGTGGAGAATGGATTCGTACAAATG CTGTATGTGTTGTGTGTCACTACGGGTGAGGCATCCGAGGCTTGTGTTCAAGCCCTTGTT GTTCAGCAAGTTGTTATGGTAGATAGTACTTTAGTTCACTTAGAACTCTTTGTCTGATTG CCTTTGGTTATTGGCAGTGCTGGTAGACCATTTAACGGAACCATTCATTCTCACTCCAGC AGAACCTGAGCAACCTGGGAACATGGAAACTGGAATTGTAATGCTTACAACAGAAAATAT AAAATAAGCTTTTTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39963 |
Definition |
sp|Q39963|PDX1_HEVBR Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis |
Align length |
110 |
Score (bit) |
164.0 |
E-value |
3.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S7G3 |
Definition |
tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
110 |
Score (bit) |
161.0 |
E-value |
2.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945377|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_B20, 5' (618 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 161 2e-38 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 161 3e-38 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 160 4e-38 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 160 4e-38 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 160 7e-38 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 159 1e-37 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 159 1e-37 tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome ... 159 2e-37 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 158 2e-37 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 158 3e-37 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 157 6e-37 tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza... 157 6e-37 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 156 8e-37 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 155 2e-36 tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea ... 154 3e-36 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 152 2e-35 tr|A3C1S6|A3C1S6_ORYSJ Putative uncharacterized protein OS=Oryza... 152 2e-35 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 151 3e-35 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 136 9e-31 tr|Q01DD0|Q01DD0_OSTTA Sor-like protein (ISS) OS=Ostreococcus ta... 134 4e-30 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 132 2e-29 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 131 3e-29 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 129 1e-28 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 128 2e-28 tr|B6QFZ9|B6QFZ9_PENMA Pyridoxine biosynthesis protein OS=Penici... 126 1e-27 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 125 2e-27 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 125 2e-27 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 125 2e-27 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 125 2e-27 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 125 2e-27
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 161 bits (408), Expect = 2e-38 Identities = 82/110 (74%), Positives = 91/110 (82%) Frame = +3
Query: 3 TFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGN 182 TFAKEI APYELVRQTKQLGRLPVVNF +MMQLGCDGVFVGSGIFKSG+ Sbjct: 205 TFAKEIQAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGD 264
Query: 183 PSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 P++RARAIV AVTH+ D ++ADVS LGEAMVGINL+DKKVERFAARS+ Sbjct: 265 PAKRARAIVEAVTHYRDAHVLADVSENLGEAMVGINLSDKKVERFAARSE 314
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 161 bits (407), Expect = 3e-38 Identities = 81/110 (73%), Positives = 92/110 (83%) Frame = +3
Query: 3 TFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGN 182 T+AKEI APYELVRQTKQLGRLPVVNF +MMQLGCDGVFVGSGIFKSG+ Sbjct: 204 TYAKEIQAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGD 263
Query: 183 PSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 P++RARAIV AVTH+ND ++A+VS LGEAMVGINL+DKKVERFAARS+ Sbjct: 264 PAKRARAIVEAVTHYNDARVLAEVSENLGEAMVGINLSDKKVERFAARSE 313
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 160 bits (406), Expect = 4e-38 Identities = 79/110 (71%), Positives = 91/110 (82%) Frame = +3
Query: 3 TFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGN 182 TFAK IAAPY+LV QTKQLGRLPVV+F +MMQLGCDGVFVGSG+FKSG+ Sbjct: 202 TFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGD 261
Query: 183 PSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 P++RARAIV AVTH++DP I+A+VSCGLGEAMVGINL D KVERFA RS+ Sbjct: 262 PAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLTDDKVERFANRSE 311
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 160 bits (406), Expect = 4e-38 Identities = 81/110 (73%), Positives = 93/110 (84%) Frame = +3
Query: 3 TFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGN 182 +FAKEIAAPYELVRQTKQLGRLPVVNF +MMQLGCDGVFVGSGIFKSG+ Sbjct: 206 SFAKEIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGD 265
Query: 183 PSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 P++RARAIV AVTH+ND ++A+VS LGEAMVGINL++KKVERFAARS+ Sbjct: 266 PAKRARAIVEAVTHYNDAHVLAEVSENLGEAMVGINLSNKKVERFAARSE 315
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 160 bits (404), Expect = 7e-38 Identities = 76/110 (69%), Positives = 92/110 (83%) Frame = +3
Query: 3 TFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGN 182 TFAK+IAAPY+LV QTKQLGRLPVV+F +MMQLGCDGVFVGSG+FKSG+ Sbjct: 201 TFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGD 260
Query: 183 PSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 P++RARAIV AVTH++DP ++A++SCGLGEAMVG+NLND VERFA RS+ Sbjct: 261 PAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNLNDSNVERFANRSE 310
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 159 bits (402), Expect = 1e-37 Identities = 79/109 (72%), Positives = 91/109 (83%) Frame = +3
Query: 6 FAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGNP 185 +AK IAAPY+LV QTKQLGRLPVV F +MMQLGCDGVFVGSGIFKSG+P Sbjct: 209 YAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDP 268
Query: 186 SQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 ++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER+AARS+ Sbjct: 269 ARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVERYAARSE 317
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 159 bits (402), Expect = 1e-37 Identities = 79/109 (72%), Positives = 91/109 (83%) Frame = +3
Query: 6 FAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGNP 185 +AK IAAPY+LV QTKQLGRLPVV F +MMQLGCDGVFVGSGIFKSG+P Sbjct: 272 YAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDP 331
Query: 186 SQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 ++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER+AARS+ Sbjct: 332 ARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVERYAARSE 380
>tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024095001 PE=4 SV=1 Length = 197
Score = 159 bits (401), Expect = 2e-37 Identities = 75/110 (68%), Positives = 93/110 (84%) Frame = +3
Query: 3 TFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGN 182 T+AK+++APY+LV QTKQLGRLPVV+F +MMQLGCDGVFVGSG+FKSG+ Sbjct: 88 TYAKKLSAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGD 147
Query: 183 PSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 P++RARAIV AVTH++DP ++A+VSCGLGEAMVGINLND KVER+A RS+ Sbjct: 148 PARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDDKVERYANRSE 197
>tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226199 PE=4 SV=1 Length = 315
Score = 158 bits (400), Expect = 2e-37 Identities = 80/110 (72%), Positives = 91/110 (82%) Frame = +3
Query: 3 TFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGN 182 TFAK+IAAPYELVRQTKQLGRLPVVNF +MMQLGCDGVFVGSGIFKSG+ Sbjct: 206 TFAKQIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGD 265
Query: 183 PSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 P +R RAIV AVTH+ND ++A++S LGEAMVGINL+DKKVERFAARS+ Sbjct: 266 PVKRGRAIVEAVTHYNDAHMLAEMSENLGEAMVGINLSDKKVERFAARSE 315
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 158 bits (399), Expect = 3e-37 Identities = 78/109 (71%), Positives = 90/109 (82%) Frame = +3
Query: 6 FAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGNP 185 +AK IAAPY+LV QTKQLGRLPVV F +MMQLGCDGVFVGSGIFKSG+P Sbjct: 209 YAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDP 268
Query: 186 SQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 332 ++RARAIV AVTH++DP+I+ DVS GLGEAMVGINLND KVER+AARS+ Sbjct: 269 ARRARAIVQAVTHYSDPTILTDVSAGLGEAMVGINLNDPKVERYAARSE 317
|