DK945400 |
Clone id |
YMU02A01NGRL0009_C24 |
Library |
YMU02 |
Length |
562 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_C24. 5' end sequence. |
Accession |
DK945400 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1625Contig1 |
Sequence |
GCTTGTTGATGCTGCCGACAAAGAGAGGTTTCCTGAGTCCAAGAAAGAGCTCGACGGACT TCTCTCAGATGATTCTTTGGCTGGTGTGCCTTTCTTGATTCTGGGAAATAAAATAGACAT TCCTACAGCTGCTTCAGAGGAGGAGCTGAGATACTACCTTGGGCTTTCCAATTTTACCAC TGGCAAAGGAAAGGTAACTCTTGCAGAAAATATGCGAGCCATCGAGGTCTTTATGTGCAG CATTGTTCGAAAGATGGGTTATGGAGAAGGCTTCAAGTGGCTTTCAGAGTACATTGATTG AAAGGGTTATCGTCGACTGTTTTTTTTATAACGTTGGCAGTGCATGGTGCATTATATGCT ATTTATGTGCAATATGGGGTTTGACTGTACAGGCCAGGATACTTGGCAATAGAGCATAAG TGTTTAATCTGTGTCTTAGGATATGAATAGGTACTTTGATTCACTTTCAAGGGAACAACG CATATGGGGACACTCACACTCTGGTGGATTCAGAAATGCCATACATCTTTATTGTGCTCT TGTTGGGGAGCCTTTTCTTTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04834 |
Definition |
sp|O04834|SAR1A_ARATH GTP-binding protein SAR1A OS=Arabidopsis thaliana |
Align length |
99 |
Score (bit) |
145.0 |
E-value |
1.0e-34 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NLN7 |
Definition |
tr|A9NLN7|A9NLN7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
99 |
Score (bit) |
150.0 |
E-value |
6.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945400|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_C24, 5' (562 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NLN7|A9NLN7_PICSI Putative uncharacterized protein OS=Picea... 150 6e-35 tr|Q9SDK4|Q9SDK4_ORYSJ cDNA clone:001-008-G03, full insert seque... 149 1e-34 tr|B8ABU1|B8ABU1_ORYSI Putative uncharacterized protein OS=Oryza... 149 1e-34 tr|A2ZRD2|A2ZRD2_ORYSJ Putative uncharacterized protein OS=Oryza... 149 1e-34 tr|B4FPT6|B4FPT6_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=... 148 2e-34 tr|B2ZGG7|B2ZGG7_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 147 4e-34 tr|B2ZGG5|B2ZGG5_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 147 4e-34 tr|Q6PLR8|Q6PLR8_MAIZE Putative ras-like small GTP binding ptote... 147 5e-34 tr|Q93W16|Q93W16_ORYSJ cDNA clone:006-210-H07, full insert seque... 146 7e-34 tr|B2ZGG4|B2ZGG4_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.... 145 1e-33 tr|A2WPH1|A2WPH1_ORYSI Putative uncharacterized protein OS=Oryza... 145 1e-33 tr|A2ZLM3|A2ZLM3_ORYSI Putative uncharacterized protein OS=Oryza... 145 1e-33 tr|Q8VYP7|Q8VYP7_ARATH Putative Sar1 GTP binding protein (Sar1-l... 145 2e-33 tr|B7ZZP2|B7ZZP2_MAIZE Putative uncharacterized protein OS=Zea m... 145 2e-33 tr|B6TG58|B6TG58_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=... 145 2e-33 tr|Q2QNM5|Q2QNM5_ORYSJ Os12g0560300 protein OS=Oryza sativa subs... 144 3e-33 tr|A3CIF1|A3CIF1_ORYSJ Putative uncharacterized protein OS=Oryza... 144 3e-33 tr|O81695|O81695_AVEFA Ras-like small monomeric GTP-binding prot... 144 4e-33 tr|A9NLN4|A9NLN4_PICSI Putative uncharacterized protein OS=Picea... 143 6e-33 tr|A7Q8N0|A7Q8N0_VITVI Chromosome chr5 scaffold_64, whole genome... 143 7e-33 tr|Q3E6Q3|Q3E6Q3_ARATH Uncharacterized protein At1g02620.1 OS=Ar... 142 1e-32 tr|A9RG76|A9RG76_PHYPA Sar1-family small GTPase OS=Physcomitrell... 142 1e-32 tr|O65007|O65007_MALDO GTP-binding protein Sar1 OS=Malus domesti... 141 2e-32 tr|B7FMA7|B7FMA7_MEDTR Putative uncharacterized protein OS=Medic... 141 2e-32 tr|A9PIL8|A9PIL8_POPJC Putative uncharacterized protein OS=Popul... 141 2e-32 tr|A9T8D1|A9T8D1_PHYPA Sar1-family small GTPase OS=Physcomitrell... 141 3e-32 tr|Q3HRY1|Q3HRY1_SOLTU Small GTP-binding protein Sar1BNt-like pr... 139 1e-31 tr|A9PD96|A9PD96_POPTR Putative uncharacterized protein OS=Popul... 139 1e-31 tr|Q307Y7|Q307Y7_SOLTU GTPase-like OS=Solanum tuberosum PE=2 SV=1 138 2e-31 tr|Q9SDQ5|Q9SDQ5_TOBAC Small GTP-binding protein Sar1BNt OS=Nico... 137 3e-31
>tr|A9NLN7|A9NLN7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 193
Score = 150 bits (378), Expect = 6e-35 Identities = 77/99 (77%), Positives = 82/99 (82%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDAADKERF ESKKE VPFLILGNKIDIP AASE+ELRYYLGLSN+TT Sbjct: 94 LVDAADKERFAESKKELDALLSDDSLTNVPFLILGNKIDIPYAASEDELRYYLGLSNYTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKGKV LA+ N+RAIEVFMCSIVRKMGYGEG KWLS+YI Sbjct: 154 GKGKVNLADSNVRAIEVFMCSIVRKMGYGEGIKWLSQYI 192
>tr|Q9SDK4|Q9SDK4_ORYSJ cDNA clone:001-008-G03, full insert sequence OS=Oryza sativa subsp. japonica GN=P0705D01.9 PE=2 SV=1 Length = 193
Score = 149 bits (376), Expect = 1e-34 Identities = 75/99 (75%), Positives = 82/99 (82%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDAADKERF ESKKE A VPFLILGNKIDIP AASEEELRYYLGLSNFTT Sbjct: 94 LVDAADKERFAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKG V LA+ N+R +E+FMCS+VRKMGYGEGFKW+S+YI Sbjct: 154 GKGNVNLADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYI 192
>tr|B8ABU1|B8ABU1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01215 PE=4 SV=1 Length = 193
Score = 149 bits (376), Expect = 1e-34 Identities = 75/99 (75%), Positives = 82/99 (82%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDAADKERF ESKKE A VPFLILGNKIDIP AASEEELRYYLGLSNFTT Sbjct: 94 LVDAADKERFAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKG V LA+ N+R +E+FMCS+VRKMGYGEGFKW+S+YI Sbjct: 154 GKGNVNLADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYI 192
>tr|A2ZRD2|A2ZRD2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001104 PE=4 SV=1 Length = 277
Score = 149 bits (376), Expect = 1e-34 Identities = 75/99 (75%), Positives = 82/99 (82%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDAADKERF ESKKE A VPFLILGNKIDIP AASEEELRYYLGLSNFTT Sbjct: 178 LVDAADKERFAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGLSNFTT 237
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKG V LA+ N+R +E+FMCS+VRKMGYGEGFKW+S+YI Sbjct: 238 GKGNVNLADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYI 276
>tr|B4FPT6|B4FPT6_MAIZE GTP-binding protein SAR1A OS=Zea mays PE=2 SV=1 Length = 193
Score = 148 bits (374), Expect = 2e-34 Identities = 74/99 (74%), Positives = 81/99 (81%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDA DKERF ESKKE A VPFLILGNKIDIP AASEEELRYYLGLSNFTT Sbjct: 94 LVDAVDKERFAESKKELDALLADDSLANVPFLILGNKIDIPYAASEEELRYYLGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKG V LA+ N+R +E+FMCS+VRKMGYGEGFKW+S+YI Sbjct: 154 GKGNVNLADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYI 192
>tr|B2ZGG7|B2ZGG7_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.4 PE=2 SV=1 Length = 193
Score = 147 bits (371), Expect = 4e-34 Identities = 75/99 (75%), Positives = 83/99 (83%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDA DKERF ESKKE A VPFLILGNKIDIP AASEEELRY+LGLSNFTT Sbjct: 94 LVDAYDKERFAESKKELDALLSDDSLATVPFLILGNKIDIPYAASEEELRYHLGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKGKV+L+E N+R +EVFMCSIVRKMGYGEGFKW+S+Y+ Sbjct: 154 GKGKVSLSESNVRPLEVFMCSIVRKMGYGEGFKWMSQYL 192
>tr|B2ZGG5|B2ZGG5_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.2 PE=2 SV=1 Length = 193
Score = 147 bits (371), Expect = 4e-34 Identities = 75/99 (75%), Positives = 83/99 (83%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDA DKERF ESKKE A VPFLILGNKIDIP AASEEELRY++GLSNFTT Sbjct: 94 LVDAYDKERFAESKKELDALLSDDSLATVPFLILGNKIDIPYAASEEELRYHMGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKGKV+L+E N+R +EVFMCSIVRKMGYGEGFKW+S+YI Sbjct: 154 GKGKVSLSESNVRPLEVFMCSIVRKMGYGEGFKWMSQYI 192
>tr|Q6PLR8|Q6PLR8_MAIZE Putative ras-like small GTP binding ptotein OS=Zea mays PE=2 SV=1 Length = 193
Score = 147 bits (370), Expect = 5e-34 Identities = 73/99 (73%), Positives = 81/99 (81%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDA DKERF ESKKE A VPFLILGNKIDIP AASEEELRYYLGLSNFTT Sbjct: 94 LVDAVDKERFAESKKELDALLADDSLANVPFLILGNKIDIPYAASEEELRYYLGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKG V LA+ N+R +++FMCS+VRKMGYGEGFKW+S+YI Sbjct: 154 GKGNVNLADSNVRPLKIFMCSVVRKMGYGEGFKWMSQYI 192
>tr|Q93W16|Q93W16_ORYSJ cDNA clone:006-210-H07, full insert sequence OS=Oryza sativa subsp. japonica GN=B1088D01.1 PE=2 SV=1 Length = 193
Score = 146 bits (369), Expect = 7e-34 Identities = 74/99 (74%), Positives = 82/99 (82%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDA DKERF ESKKE A VPFLILGNKIDIP AASEEELRY+LGLSNFTT Sbjct: 94 LVDAYDKERFAESKKELDALLSDDSLAAVPFLILGNKIDIPYAASEEELRYHLGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKGKV+L E N+R +EVFMCS+VRKMGYG+GFKW+S+YI Sbjct: 154 GKGKVSLGESNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 192
>tr|B2ZGG4|B2ZGG4_WHEAT GTPase SAR1 OS=Triticum aestivum GN=Sar1.1 PE=2 SV=1 Length = 193
Score = 145 bits (367), Expect = 1e-33 Identities = 75/99 (75%), Positives = 82/99 (82%), Gaps = 1/99 (1%) Frame = +2
Query: 2 LVDAADKERFPESKKEXXXXXXXXXXAGVPFLILGNKIDIPTAASEEELRYYLGLSNFTT 181 LVDA DKERF ESKKE A VPFLILGNKIDIP AASEEELRY +GLSNFTT Sbjct: 94 LVDAYDKERFAESKKELDALLSDDSLATVPFLILGNKIDIPYAASEEELRYRMGLSNFTT 153
Query: 182 GKGKVTLAE-NMRAIEVFMCSIVRKMGYGEGFKWLSEYI 295 GKGKV+L+E N+R +EVFMCSIVRKMGYGEGFKW+S+YI Sbjct: 154 GKGKVSLSESNVRPLEVFMCSIVRKMGYGEGFKWMSQYI 192
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