DK945409 [AcEST]

DK945409
Clone id	YMU02A01NGRL0009_D13
Library	YMU02
Length	230
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_D13. 5' end sequence.
Accession	DK945409
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL279Contig1
Sequence	GAAAGAGAGTGAGTATTGCAGTGCATTTTTCTCTCTCACTACAGCAGGCAGTGCTGAGGA ATGTCAGCTTTGGCATGTAACAGGGAACATGCACATGGGCATTGATGAGAAGTGTGTGTC CTCCCCTTGGCCGTCTTTGTATGTTGGTTTATACTCTTTAAAGTATATGTTCAAGTGATG ATTCCACAAGCTGCCTGCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q5VRD1
Definition	sp\|Q5VRD1\|IAA1_ORYSJ Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica
Align length	29
Score (bit)	28.9
E-value	8.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945409\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_D13, 5' (201 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q5VRD1\|IAA1_ORYSJ Auxin-responsive protein IAA1 OS=Oryza sati... 29 8.4 sp\|Q6AT10\|IAA15_ORYSJ Auxin-responsive protein IAA15 OS=Oryza sa... 29 8.4 >sp\|Q5VRD1\|IAA1_ORYSJ Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1 Length = 199 Score = 28.9 bits (63), Expect = 8.4 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 156 EYKPTYKDGQGEDTHFSSMPMCMFPVTCQ 70 EY PTY+D G+ +P MF TCQ Sbjct: 152 EYVPTYEDKDGDWMLVGDVPWKMFVETCQ 180 >sp\|Q6AT10\|IAA15_ORYSJ Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1 Length = 212 Score = 28.9 bits (63), Expect = 8.4 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 156 EYKPTYKDGQGEDTHFSSMPMCMFPVTCQ 70 EY PTY+D G+ +P MF TCQ Sbjct: 166 EYVPTYEDKDGDWMLVGDVPWKMFVETCQ 194
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK945409\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_D13, 5' (201 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****