DK945421 |
Clone id |
YMU02A01NGRL0009_E06 |
Library |
YMU02 |
Length |
511 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_E06. 5' end sequence. |
Accession |
DK945421 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL531Contig1 |
Sequence |
AGCACTTGGGGCTTTGCCAGCGCGAGGATTGCAGAGACGAGACGAGAGCGCGCGAGGAGA TCTCTGCAGAGCAGAAGTGCAAGATATGGCAGATGGAGTCAGTGGAAAATACACCATAAA AATACCAAAAAATGTGTACGAGAGACAATTGTACTATCAGAGTAAGATTGGCAATTACAC TCATATGAAAGGCCCTTTTGATAAGATTGTCAGCTTCATCGTGCCACTAGCAATTGGAAC TACAGCGGCTGCCATGATGGGACGTGGCCTCTGGAATCTGTCCAATGGAACTGGAAAGAA AGAATGAGGTTGGAAGTACACATCATTTTATGATCATGGAAAGTTGGAAATAATTTTCTC AGCTCACTTTACACCTTCAACAGTTTTTTTTTGGCCTTTGACTGAGCCTCTGTCTCTGTA GTGAACTTTGCAGAATTTCATGTTGGAAGTCTCAATTTGAATAAATACATTTGTTGGTCC AGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0ANP0 |
Definition |
sp|Q0ANP0|RL1_MARMM 50S ribosomal protein L1 OS=Maricaulis maris (strain MCS10) |
Align length |
40 |
Score (bit) |
31.6 |
E-value |
2.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NT91 |
Definition |
tr|A9NT91|A9NT91_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
62 |
Score (bit) |
68.2 |
E-value |
2.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945421|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0009_E06, 5' (482 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NT91|A9NT91_PICSI Putative uncharacterized protein OS=Picea... 68 2e-10 tr|A9NRV8|A9NRV8_PICSI Putative uncharacterized protein OS=Picea... 68 2e-10 tr|A9PAD6|A9PAD6_POPTR Putative uncharacterized protein OS=Popul... 62 1e-08 tr|A9PB26|A9PB26_POPTR Putative uncharacterized protein OS=Popul... 60 4e-08 tr|A7PQG6|A7PQG6_VITVI Chromosome chr6 scaffold_25, whole genome... 60 7e-08 tr|Q944S8|Q944S8_ARATH Putative uncharacterized protein (Putativ... 59 2e-07 tr|Q8LCZ9|Q8LCZ9_ARATH Putative uncharacterized protein OS=Arabi... 57 3e-07 tr|Q6J4I2|Q6J4I2_9LAMI Putative COX VIIa-like protein (Fragment)... 57 3e-07 tr|Q7XIQ1|Q7XIQ1_ORYSJ Os07g0647500 protein OS=Oryza sativa subs... 56 1e-06 tr|B8B5D7|B8B5D7_ORYSI Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|B6T2C0|B6T2C0_MAIZE COX VIIa-like protein OS=Zea mays PE=4 SV=1 56 1e-06 tr|A3BMU8|A3BMU8_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|B6TTC1|B6TTC1_MAIZE COX VIIa-like protein OS=Zea mays PE=4 SV=1 55 1e-06 tr|Q0E3P3|Q0E3P3_ORYSJ Os02g0162000 protein OS=Oryza sativa subs... 55 2e-06 tr|A3A3E7|A3A3E7_ORYSJ Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|A2X175|A2X175_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|B6U9L3|B6U9L3_MAIZE COX VIIa-like protein OS=Zea mays PE=4 SV=1 54 4e-06 tr|A3B4R3|A3B4R3_ORYSJ Putative uncharacterized protein OS=Oryza... 54 4e-06 tr|Q6J4I1|Q6J4I1_9LAMI Putative COX VIIa-like protein (Fragment)... 52 1e-05 tr|B6SQE1|B6SQE1_MAIZE COX VIIa-like protein OS=Zea mays PE=4 SV=1 51 2e-05 tr|B6T125|B6T125_MAIZE COX VIIa-like protein OS=Zea mays PE=4 SV=1 51 3e-05 tr|A7NZF7|A7NZF7_VITVI Chromosome chr6 scaffold_3, whole genome ... 50 4e-05 tr|A5BPC7|A5BPC7_VITVI Putative uncharacterized protein OS=Vitis... 50 4e-05 tr|B6U1Q4|B6U1Q4_MAIZE COX VIIa-like protein OS=Zea mays PE=2 SV=1 50 6e-05 tr|B6UEL5|B6UEL5_MAIZE COX VIIa-like protein OS=Zea mays PE=4 SV=1 50 7e-05 tr|A9U4I1|A9U4I1_PHYPA Predicted protein (Fragment) OS=Physcomit... 47 6e-04 tr|A9PDN8|A9PDN8_POPTR Putative uncharacterized protein OS=Popul... 43 0.009 tr|A5ZJE9|A5ZJE9_9BACE Putative uncharacterized protein OS=Bacte... 37 0.37 tr|A8T144|A8T144_9VIBR Putative uncharacterized protein OS=Vibri... 36 1.1 tr|A7LZB2|A7LZB2_BACOV Putative uncharacterized protein OS=Bacte... 35 1.4
>tr|A9NT91|A9NT91_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 67
Score = 68.2 bits (165), Expect = 2e-10 Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Frame = +2
Query: 122 IPKN-VYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGK 298 +P++ V+ +Q YYQ+ I +T++KGP+DKI S ++P+ + TA +M+GRG++N+S+G GK Sbjct: 7 VPRDYVFRKQQYYQN-IRKHTYLKGPYDKITSVVIPITLAVTALSMIGRGIYNMSHGIGK 65
Query: 299 KE 304 KE Sbjct: 66 KE 67
>tr|A9NRV8|A9NRV8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 126
Score = 68.2 bits (165), Expect = 2e-10 Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Frame = +2
Query: 122 IPKN-VYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGK 298 +P++ V+ +Q YYQ+ I +T++KGP+DKI S ++P+ + TA +M+GRG++N+S+G GK Sbjct: 66 VPRDYVFRKQQYYQN-IRKHTYLKGPYDKITSVVIPITLAVTALSMIGRGIYNMSHGIGK 124
Query: 299 KE 304 KE Sbjct: 125 KE 126
Score = 47.4 bits (111), Expect = 4e-04 Identities = 20/48 (41%), Positives = 36/48 (75%), Gaps = 1/48 (2%) Frame = +2
Query: 122 IPKN-VYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMG 262 +P++ V+ +Q YYQ+ I +T++KGP+DKI S ++P+ + TA +M+G Sbjct: 7 VPRDYVFRKQQYYQN-IRKHTYLKGPYDKITSVVIPITLAVTALSMIG 53
>tr|A9PAD6|A9PAD6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 68
Score = 62.0 bits (149), Expect = 1e-08 Identities = 27/59 (45%), Positives = 44/59 (74%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGKKE 304 + + E+Q+Y+QS I +T++KGP DKI S +PLA+ + ++GRG++N+S+G GKKE Sbjct: 11 EKLLEKQIYFQS-IHKHTYLKGPLDKITSVAIPLALAGSTLYLIGRGIYNMSHGIGKKE 68
>tr|A9PB26|A9PB26_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 68
Score = 60.5 bits (145), Expect = 4e-08 Identities = 26/59 (44%), Positives = 42/59 (71%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGKKE 304 + + E Q Y+QS I +T++KGP DK+ S +P+A T+ ++GRG++N+S+G GKKE Sbjct: 11 EKLVEHQKYFQS-IHKHTYLKGPLDKVTSVAIPIAFAATSLFLIGRGIYNMSHGIGKKE 68
>tr|A7PQG6|A7PQG6_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022060001 PE=4 SV=1 Length = 67
Score = 59.7 bits (143), Expect = 7e-08 Identities = 25/59 (42%), Positives = 44/59 (74%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGKKE 304 + ++E+Q ++QS I +T++KGP DKI S +P A+ T+ A++ +G++N+S+G GKKE Sbjct: 10 ERLFEKQRFFQS-IHKHTYLKGPMDKITSVAIPAALAATSIALIAQGIYNMSHGIGKKE 67
>tr|Q944S8|Q944S8_ARATH Putative uncharacterized protein (Putative uncharacterized protein At4g21105/F7J7.1) (At4g21108/At4g21108) OS=Arabidopsis thaliana GN=At4g21105/F7J7.1 PE=4 SV=1 Length = 68
Score = 58.5 bits (140), Expect = 2e-07 Identities = 26/59 (44%), Positives = 42/59 (71%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGKKE 304 + + E+Q +QS I +T++KGP DKI S +P+A+ ++ M+G G++N+SNG GKKE Sbjct: 11 EKLLEKQRLFQS-IQRHTYLKGPMDKITSVAIPIALAASSLYMIGTGIYNMSNGIGKKE 68
>tr|Q8LCZ9|Q8LCZ9_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 68
Score = 57.4 bits (137), Expect = 3e-07 Identities = 26/59 (44%), Positives = 41/59 (69%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGKKE 304 + + E+Q +QS I +T++KGP DKI S +P+A ++ M+G G++N+SNG GKKE Sbjct: 11 EKLLEKQRLFQS-IQRHTYLKGPMDKITSVAIPIAXAASSLYMIGTGIYNMSNGIGKKE 68
>tr|Q6J4I2|Q6J4I2_9LAMI Putative COX VIIa-like protein (Fragment) OS=Pinguicula sp. Jobson 240 PE=2 SV=1 Length = 61
Score = 57.4 bits (137), Expect = 3e-07 Identities = 26/57 (45%), Positives = 41/57 (71%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGK 298 + + ERQ +QS I +T++KGP DK+ S +PLA+ +A ++GRG++N+SNG GK Sbjct: 6 EKLLERQKVFQS-IHKHTYLKGPLDKVTSVAIPLAMAGSALFLIGRGIYNMSNGIGK 61
>tr|Q7XIQ1|Q7XIQ1_ORYSJ Os07g0647500 protein OS=Oryza sativa subsp. japonica GN=OJ1316_A04.115 PE=4 SV=1 Length = 67
Score = 55.8 bits (133), Expect = 1e-06 Identities = 24/59 (40%), Positives = 44/59 (74%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGKKE 304 + ++++Q Y+Q+ + +T++KG +D I S +PLA+ T+ M+GRG++N+S+G GKKE Sbjct: 10 EKLFKQQQYFQN-LTKHTYLKGRYDVITSVAIPLALAGTSLFMIGRGVYNMSHGIGKKE 67
>tr|B8B5D7|B8B5D7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27104 PE=4 SV=1 Length = 152
Score = 55.8 bits (133), Expect = 1e-06 Identities = 24/59 (40%), Positives = 44/59 (74%) Frame = +2
Query: 128 KNVYERQLYYQSKIGNYTHMKGPFDKIVSFIVPLAIGTTAAAMMGRGLWNLSNGTGKKE 304 + ++++Q Y+Q+ + +T++KG +D I S +PLA+ T+ M+GRG++N+S+G GKKE Sbjct: 95 EKLFKQQQYFQN-LTKHTYLKGRYDVITSVAIPLALAGTSLFMIGRGVYNMSHGIGKKE 152
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