DK945428
Clone id YMU02A01NGRL0009_E14
Library
Length 410
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_E14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ATTTCCATTGATGCCTTTACCATGGCCAGTGTTACCATCTCCCATGCTGTTGTAAAGTTT
TGGGTGCACAGTTGCAGACCAGCTGGGGTTACATCTTCTCTTTGTATCATTCCTGAGCAT
GGGATCCTGCACTTTGACATAATTGTTGCTGCTGGAGGGATCGCACCATGGAGGTGGCGC
TTTCTAGTTTACTTCAACGATCGGGTGATATTCAATTTGGAGACCAAGCATAGATAAACA
TGGTTGGTAGTTTGTGATTGAAGTTCTTGATCGTTTTGCATCCACTTGTGCTACTCTTCT
GGCTTTGGCTGTAGAAAGTGACTGATCGTCATGGGGGTAAGCTTGTAAATTATGTGACAA
TAATCCCATTCAAATTCACCACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A3QJZ6
Definition sp|A3QJZ6|PRA22_HUMAN PRAME family member 22 OS=Homo sapiens
Align length 65
Score (bit) 30.4
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945428|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_E14, 5'
(382 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A3QJZ6|PRA22_HUMAN PRAME family member 22 OS=Homo sapiens GN=... 30 2.8
sp|Q5VWM3|PRA18_HUMAN PRAME family member 18 OS=Homo sapiens GN=... 30 2.8
sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog O... 30 2.8
sp|P62513|CYB_ASHGO Cytochrome b OS=Ashbya gossypii GN=COB PE=3 ... 30 3.7
sp|Q2U988|CD123_ASPOR Cell division cycle protein 123 OS=Aspergi... 30 3.7
sp|Q8M354|CYB_SACCA Cytochrome b OS=Saccharomyces castellii GN=C... 30 4.8
sp|A6H4Q4|CYB_VANPO Cytochrome b OS=Vanderwaltozyma polyspora (s... 29 6.3
sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF a... 29 8.2
sp|Q95ZG3|SPC97_DICDI Spindle pole body component 97 OS=Dictyost... 29 8.2

>sp|A3QJZ6|PRA22_HUMAN PRAME family member 22 OS=Homo sapiens
GN=PRAMEF22 PE=3 SV=2
Length = 479

Score = 30.4 bits (67), Expect = 2.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1

Query: 7 IDAFTMASVTISHAVVKFWVHSCRPAGVTSSLCIIPEHGILHFDI----IVAAGGIAPWR 174
++AFT + +V+ W C P G SL P+ ILH+ + + A + P R
Sbjct: 41 VEAFTSRRCEVLKVMVQAWPFPCLPLG---SLMKTPDLEILHYVVDGIDCLLAQKVRPRR 97

Query: 175 WRFLV 189
W+ V
Sbjct: 98 WKLQV 102


>sp|Q5VWM3|PRA18_HUMAN PRAME family member 18 OS=Homo sapiens
GN=PRAMEF18 PE=2 SV=1
Length = 479

Score = 30.4 bits (67), Expect = 2.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1

Query: 7 IDAFTMASVTISHAVVKFWVHSCRPAGVTSSLCIIPEHGILHFDI----IVAAGGIAPWR 174
++AFT + +V+ W C P G SL P+ ILH+ + + A + P R
Sbjct: 41 VEAFTSRRCEVLKVMVQAWPFPCLPLG---SLMKTPDLEILHYVVDGIDCLLAQKVRPRR 97

Query: 175 WRFLV 189
W+ V
Sbjct: 98 WKLQV 102


>sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog
OS=Schizosaccharomyces pombe GN=SPBC1604.15 PE=2 SV=1
Length = 545

Score = 30.4 bits (67), Expect = 2.8
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Frame = -2

Query: 357 SHNLQAYPHDDQSLSTAKARRVAQ--VDAKRS--RTSITNYQP--------------CLS 232
S ++ YP ++QSL++ K + Q VD +R+ R T +QP CL
Sbjct: 217 SFSIDVYPSENQSLASVKMGIIIQAVVDVERNGRRKGKTTFQPPSEYCHDEDMDSLHCL- 275

Query: 231 MLGLQIEYHPIVEVN*KAPPPWCDPSSSNNYVKVQD 124
M G E+H + ++ K P C SS+ + V V +
Sbjct: 276 MSGYSTEHHTVDDLFHKVPKERCLLSSTFSDVFVSN 311


>sp|P62513|CYB_ASHGO Cytochrome b OS=Ashbya gossypii GN=COB PE=3
SV=1
Length = 384

Score = 30.0 bits (66), Expect = 3.7
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1

Query: 16 FTMASVTISHAVVKFWVHSCRPAGVTSSLCIIPEHGILHFDIIVAAGGIAPWRWRFLVYF 195
F +A++ I H + S P G+T +L +P HG F +V + F+++F
Sbjct: 188 FIIAAMVIMHLMTLHVHGSSNPLGITGNLDRLPMHGYFIFKDLVTV-------FVFMIFF 240

Query: 196 NDRVIFNLET 225
+ V F+ T
Sbjct: 241 SLFVFFSPNT 250


>sp|Q2U988|CD123_ASPOR Cell division cycle protein 123
OS=Aspergillus oryzae GN=cdc123 PE=3 SV=1
Length = 413

Score = 30.0 bits (66), Expect = 3.7
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = -3

Query: 371 EWDYCHIIYKLTPMTISHFLQPK-----PEE*HKWMQNDQELQSQTTNHVYLCLVSKLNI 207
EW+ H K T + + PK P++ WM ++Q +T N +YL L S I
Sbjct: 101 EWEEIHTQIKTTISELGGIITPKLNWSAPKD-ATWMAATNDMQCRTPNDIYLLLKSSDFI 159

Query: 206 TRSLK 192
+ L+
Sbjct: 160 SHDLE 164


>sp|Q8M354|CYB_SACCA Cytochrome b OS=Saccharomyces castellii GN=COB
PE=3 SV=1
Length = 390

Score = 29.6 bits (65), Expect = 4.8
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1

Query: 16 FTMASVTISHAVVKFWVHSCRPAGVTSSLCIIPEHGILHFDIIVAAGGIAPWRWRFLVYF 195
F +A+V I H + S P G+T ++ +P HG F ++ + FL+ F
Sbjct: 188 FVIAAVVIMHMMALHIHGSSNPLGITGNMDRLPMHGYFVFKDLITV-------FVFLIVF 240

Query: 196 NDRVIFNLET 225
+ V F+ T
Sbjct: 241 SLFVFFSPNT 250


>sp|A6H4Q4|CYB_VANPO Cytochrome b OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=COB PE=3 SV=1
Length = 389

Score = 29.3 bits (64), Expect = 6.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1

Query: 16 FTMASVTISHAVVKFWVHSCRPAGVTSSLCIIPEHGILHFDIIV 147
F +A+V I H + S P G+T +L IP HG F ++
Sbjct: 192 FIIAAVVIMHMMALHTHGSSNPLGITGNLDRIPMHGYFVFKDLI 235


>sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF and
pentraxin domain-containing protein 1 OS=Mus musculus
GN=Svep1 PE=1 SV=1
Length = 3567

Score = 28.9 bits (63), Expect = 8.2
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Frame = -2

Query: 177 PPPWCDPSSSNNYVKVQDPMLRNDTKR--------RCNPSWSATVHP 61
P P C P S N KV++ L + T R +CNP + A P
Sbjct: 2194 PTPTCHPVSCNEPPKVENGFLEHTTGRTFESEARFQCNPGYKAAGSP 2240


>sp|Q95ZG3|SPC97_DICDI Spindle pole body component 97
OS=Dictyostelium discoideum GN=spc97 PE=2 SV=2
Length = 1335

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2

Query: 177 PPPWCDPSSSNNYVKVQDPMLRNDTKRRCNPSWSATVHPKLYNSM 43
PP PSSS++ VKV +N+ N + + T P +N++
Sbjct: 125 PPSNSLPSSSSSKVKVNSLTSQNNNNNNSNTNTNMTTQPPTFNNL 169


tr_hit_id A5EHY6
Definition tr|A5EHY6|A5EHY6_BRASB Non-ribosomal peptide synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Align length 50
Score (bit) 36.2
E-value 0.85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945428|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_E14, 5'
(382 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5EHY6|A5EHY6_BRASB Non-ribosomal peptide synthase OS=Bradyrh... 36 0.85
tr|A6RAD8|A6RAD8_AJECN Predicted protein OS=Ajellomyces capsulat... 34 4.2

>tr|A5EHY6|A5EHY6_BRASB Non-ribosomal peptide synthase
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=BBta_3701 PE=3 SV=1
Length = 3962

Score = 36.2 bits (82), Expect = 0.85
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2

Query: 159 PSSSNNYVKVQDPMLRNDTKRRCNPSWSATVHPKLYNSMGDGNTGHGKGI 10
P + + + DPML D++ C+P+ A P LY + G+TG KG+
Sbjct: 3220 PQFTGEVIALDDPML--DSETACDPTREAVADPLLYIAYTSGSTGRPKGV 3267


>tr|A6RAD8|A6RAD8_AJECN Predicted protein OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_05926 PE=4 SV=1
Length = 80

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -2

Query: 270 SRTSITNYQPCLSMLGLQIEYHPIVEVN*KAPPPWCDPSSS 148
SR SI Q ML + +H I V APPPWC S+
Sbjct: 8 SRVSIPELQSAHPMLFPAVRHHDISSVTPPAPPPWCKALSA 48