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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945434
Clone id YMU02A01NGRL0009_F01
Library
Length 609
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_F01. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TGTCAAAGAGCTCCGACAGCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTT
TCTCCGGCGAGGCCCCCAGCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACA
CCGCCGGCCTGTCTGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTC
ACGCACGGTGGGCTATGTTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGA
ATGGTGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGG
GTGGGCTTGACTACTTGGGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCT
GGGCATGTCAGGTAATTCTCATGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCC
TGGGCGAGGTGGAGGATCCCATCTACCCTGGTGGCTCCTTTGACCCCTTGGGCCTGGCAG
ACGACCCGGAGGCATTTGCTGAGCTGAAGGTGAAGGAACTGAAGAACGGCCGTCTGGCCA
TGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTTACCGGCAAGGGTCCTATTGAAA
ACCTGTCTG
■■Homology search results ■■ -
sp_hit_id P08221
Definition sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus
Align length 202
Score (bit) 396.0
E-value 1.0e-110
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945434|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_F01, 5'
         (609 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   396   e-110
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   395   e-110
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   395   e-110
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   395   e-109
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   394   e-109
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   394   e-109
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   394   e-109
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   394   e-109
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   394   e-109
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   393   e-109
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   393   e-109
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   392   e-109
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   392   e-108
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   392   e-108
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   390   e-108
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   390   e-108
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   390   e-108
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   390   e-108
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   389   e-108
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   387   e-107
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   387   e-107
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   387   e-107
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   387   e-107
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   387   e-107
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   387   e-107
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   387   e-107
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   385   e-107
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   384   e-106
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   382   e-106
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   381   e-105

>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  396 bits (1018), Expect = e-110
 Identities = 188/202 (93%), Positives = 196/202 (97%)
 Frame = +3

Query: 3   SKSSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIH 182
           S SS SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 32  SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 91

Query: 183 ARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIW 362
           +RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIW
Sbjct: 92  SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 151

Query: 363 ACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 542
           ACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM
Sbjct: 152 ACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 211

Query: 543 FSMFGFFVQAIVTGKGPIENLS 608
           FSMFGFFVQAIVTGKGP+ENL+
Sbjct: 212 FSMFGFFVQAIVTGKGPLENLA 233


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  395 bits (1015), Expect = e-110
 Identities = 186/200 (93%), Positives = 195/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 46  SSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 226 MFGFFVQAIVTGKGPLENLA 245


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
          Length = 267

 Score =  395 bits (1015), Expect = e-110
 Identities = 186/199 (93%), Positives = 194/199 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 46  SSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENL 605
           MFGFFVQAIVTGKGP++NL
Sbjct: 226 MFGFFVQAIVTGKGPLDNL 244


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  395 bits (1014), Expect = e-109
 Identities = 187/200 (93%), Positives = 194/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 45  SSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 104

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PEL A+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 105 WAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 164

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS
Sbjct: 165 QVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 224

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 225 MFGFFVQAIVTGKGPLENLA 244


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  394 bits (1013), Expect = e-109
 Identities = 186/199 (93%), Positives = 194/199 (97%)
 Frame = +3

Query: 12  SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARW 191
           S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 47  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 106

Query: 192 AMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQ 371
           AMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQ
Sbjct: 107 AMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166

Query: 372 VILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 551
           VILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSM
Sbjct: 167 VILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 226

Query: 552 FGFFVQAIVTGKGPIENLS 608
           FGFFVQAIVTGKGP+ENL+
Sbjct: 227 FGFFVQAIVTGKGPLENLA 245


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  394 bits (1012), Expect = e-109
 Identities = 186/200 (93%), Positives = 195/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 46  SSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 226 MFGFFVQAIVTGKGPLENLA 245


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  394 bits (1012), Expect = e-109
 Identities = 186/200 (93%), Positives = 195/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 45  SSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 104

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 105 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 164

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFS
Sbjct: 165 QVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 224

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 225 MFGFFVQAIVTGKGPLENLA 244


>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R,
           chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1
          Length = 267

 Score =  394 bits (1011), Expect = e-109
 Identities = 187/200 (93%), Positives = 194/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTA LSADPETFAKNRELEVIH R
Sbjct: 46  SSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 226 MFGFFVQAIVTGKGPLENLA 245


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  394 bits (1011), Expect = e-109
 Identities = 186/200 (93%), Positives = 195/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 44  ASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 103

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFS
Sbjct: 164 QVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 223

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 224 MFGFFVQAIVTGKGPLENLA 243


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  393 bits (1010), Expect = e-109
 Identities = 185/202 (91%), Positives = 195/202 (96%)
 Frame = +3

Query: 3   SKSSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIH 182
           S  S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 42  SAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 101

Query: 183 ARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIW 362
            RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIW
Sbjct: 102 CRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 161

Query: 363 ACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 542
           ACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAM
Sbjct: 162 ACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAM 221

Query: 543 FSMFGFFVQAIVTGKGPIENLS 608
           FSMFGFFVQAIVTGKGP+ENL+
Sbjct: 222 FSMFGFFVQAIVTGKGPLENLA 243
tr_hit_id Q2XTE0
Definition tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like OS=Solanum tuberosum
Align length 200
Score (bit) 396.0
E-value 1.0e-109
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945434|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_F01, 5'
         (609 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   396   e-109
tr|O64449|O64449_NICSY Light harvesting chlorophyll a/b-binding ...   396   e-109
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   396   e-109
tr|Q5ZF93|Q5ZF93_PLAMJ Light harvesting protein 1 (Fragment) OS=...   396   e-109
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   395   e-109
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   395   e-109
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   395   e-108
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   395   e-108
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   395   e-108
tr|B8XLF1|B8XLF1_SOLNI Putative chloroplast chlorophyll a/b bind...   395   e-108
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   394   e-108
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   394   e-108
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   394   e-108
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   394   e-108
tr|O64450|O64450_NICSY Light harvesting chlorophyll a/b-binding ...   394   e-108
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ...   394   e-108
tr|O64448|O64448_NICSY Light harvesting chlorophyll a/b-binding ...   394   e-108
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   394   e-108
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   393   e-108
tr|Q9LKI0|Q9LKI0_PHAAU LHCII type I chlorophyll a/b-binding prot...   393   e-108
tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ...   393   e-108
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ...   393   e-108
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ...   393   e-108
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ...   393   e-108
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   393   e-108
tr|Q1EP45|Q1EP45_MUSBA Chlorophyll A-B binding protein (CAB), pu...   392   e-108
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   392   e-108
tr|O22669|O22669_PANGI Chlorophyll a/b binding protein of LHCII ...   392   e-108
tr|O04685|O04685_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   392   e-108
tr|Q41423|Q41423_SOLTU Chlorophyll a/b binding protein OS=Solanu...   392   e-108

>tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like
           OS=Solanum tuberosum PE=2 SV=1
          Length = 267

 Score =  396 bits (1018), Expect = e-109
 Identities = 187/200 (93%), Positives = 195/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 46  SSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 226 MFGFFVQAIVTGKGPLENLA 245


>tr|O64449|O64449_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*8 PE=3 SV=1
          Length = 267

 Score =  396 bits (1018), Expect = e-109
 Identities = 187/199 (93%), Positives = 194/199 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 46  SSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENL 605
           MFGFFVQAIVTGKGP+ENL
Sbjct: 226 MFGFFVQAIVTGKGPLENL 244


>tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein
           OS=Mesembryanthemum crystallinum GN=CAB3 PE=2 SV=1
          Length = 267

 Score =  396 bits (1018), Expect = e-109
 Identities = 187/200 (93%), Positives = 196/200 (98%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SSDSPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 46  SSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QVILMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVILMGAIEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 226 MFGFFVQAIVTGKGPLENLA 245


>tr|Q5ZF93|Q5ZF93_PLAMJ Light harvesting protein 1 (Fragment)
           OS=Plantago major GN=lhc1 PE=2 SV=1
          Length = 229

 Score =  396 bits (1017), Expect = e-109
 Identities = 188/200 (94%), Positives = 196/200 (98%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+R
Sbjct: 8   SSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 67

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 68  WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 127

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFS
Sbjct: 128 QVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFS 187

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 188 MFGFFVQAIVTGKGPLENLA 207


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  395 bits (1016), Expect = e-109
 Identities = 186/200 (93%), Positives = 196/200 (98%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+R
Sbjct: 49  SSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 108

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWAC
Sbjct: 109 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWAC 168

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QVILMGAVEGYR+AGGPLGE+ DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFS
Sbjct: 169 QVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFS 228

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGPIENL+
Sbjct: 229 MFGFFVQAIVTGKGPIENLA 248


>tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein
           LHCb1.2 OS=Spinacia oleracea GN=lhcb1.2 PE=4 SV=1
          Length = 267

 Score =  395 bits (1016), Expect = e-109
 Identities = 187/200 (93%), Positives = 195/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIH R
Sbjct: 46  SSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCR 105

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 106 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS
Sbjct: 166 QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 225

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 226 MFGFFVQAIVTGKGPLENLA 245


>tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein
           OS=Mesembryanthemum crystallinum GN=CAB2 PE=2 SV=1
          Length = 267

 Score =  395 bits (1015), Expect = e-108
 Identities = 186/202 (92%), Positives = 196/202 (97%)
 Frame = +3

Query: 3   SKSSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIH 182
           S SSDSPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETF KNRELEVIH
Sbjct: 44  SVSSDSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFTKNRELEVIH 103

Query: 183 ARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIW 362
            RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDYLGNPSLVHAQSILAIW
Sbjct: 104 CRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIW 163

Query: 363 ACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 542
           ACQVILMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAM
Sbjct: 164 ACQVILMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAM 223

Query: 543 FSMFGFFVQAIVTGKGPIENLS 608
           FSMFGFFVQAIVTGKGP+ENL+
Sbjct: 224 FSMFGFFVQAIVTGKGPLENLA 245


>tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=Lhcb1-2 PE=4 SV=1
          Length = 265

 Score =  395 bits (1014), Expect = e-108
 Identities = 186/202 (92%), Positives = 195/202 (96%)
 Frame = +3

Query: 3   SKSSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIH 182
           S  S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 42  SAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 101

Query: 183 ARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIW 362
            RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIW
Sbjct: 102 CRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 161

Query: 363 ACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 542
           ACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAM
Sbjct: 162 ACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM 221

Query: 543 FSMFGFFVQAIVTGKGPIENLS 608
           FSMFGFFVQAIVTGKGP+ENL+
Sbjct: 222 FSMFGFFVQAIVTGKGPLENLA 243


>tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*4 PE=3 SV=1
          Length = 265

 Score =  395 bits (1014), Expect = e-108
 Identities = 187/200 (93%), Positives = 195/200 (97%)
 Frame = +3

Query: 9   SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHAR 188
           +S SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 44  ASSSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 103

Query: 189 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 368
           WAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 369 QVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 548
           QVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFS
Sbjct: 164 QVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 223

Query: 549 MFGFFVQAIVTGKGPIENLS 608
           MFGFFVQAIVTGKGP+ENL+
Sbjct: 224 MFGFFVQAIVTGKGPLENLA 243


>tr|B8XLF1|B8XLF1_SOLNI Putative chloroplast chlorophyll a/b binding
           protein (Fragment) OS=Solanum nigrum PE=2 SV=1
          Length = 249

 Score =  395 bits (1014), Expect = e-108
 Identities = 186/202 (92%), Positives = 195/202 (96%)
 Frame = +3

Query: 3   SKSSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIH 182
           S  S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 26  SAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 85

Query: 183 ARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIW 362
            RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIW
Sbjct: 86  CRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 145

Query: 363 ACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 542
           ACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAM
Sbjct: 146 ACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM 205

Query: 543 FSMFGFFVQAIVTGKGPIENLS 608
           FSMFGFFVQAIVTGKGP+ENL+
Sbjct: 206 FSMFGFFVQAIVTGKGPLENLA 227